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The map label for this gene is petC [H]

Identifier: 162147840

GI number: 162147840

Start: 2100653

End: 2101414

Strand: Reverse

Name: petC [H]

Synonym: GDI_2056

Alternate gene names: 162147840

Gene position: 2101414-2100653 (Counterclockwise)

Preceding gene: 162147841

Following gene: 162147839

Centisome position: 53.28

GC content: 70.34

Gene sequence:

>762_bases
ATGAAGAAGATACTGGTCGCGCCGCTTGCCGCGGCGCTGTGCCTGGCCGCGCCCGCCGTCCATGCCGCCCCCCATGCCCC
GGCCCCCCATCAGGACTGGAGCTTCGACGGTCCGCTGGGCCGCTTCGACATGGCGGCGGTCCAGCGCGGCTATGCCGTCT
ATGCCCAGGTCTGTTCGGCCTGCCATTCGATGAACGCCGTGACCTATGGCGACCTCGGCGCCATGGGCCTGACGGACGAG
CAGGTGCGCCAGATCGCGGCCGCCCAGTCCGTCCCGGGCGGAGTGGACGCGCAGGGCGAACCGGTCACGCGCCCGGCCAC
GGCGGCCGACCATTTCCGCAATCCCTTCCCCAGTCCCGAGGCCGCGGCCGCCGCCAACAACGGCACGCCGCCGCCCGACC
AGTCGCGGCTGGCGCTGGTCTATACCGGCGGGCCGGACCGGATCTACGCGCTGCTGACCGGCTACCGCACGCCGCCCGCC
GGCTACCGGCCCAGCCATCCCGGCGCGTTCTACAACCCGTACGCCGCCGACGGGGAAATCTCGATGCCGCCGCCATTGCA
TGACGGGCTGGTGGATTATGCCGACGGCACCCCGGCCACGACGGCGCAGGAAGCGCGCGACGTCACCACCTTCCTGGCCT
GGGTGGCGCAACCCCATCTGGCGGAGCGCCATCGCCTGGGCATCCAGGTGACGCTCTATCTTCTGTTCCTCGCCGTGCTG
GCGTTCCTTCTCAAACGGAGAATCTGGTCCGATGTCCATTAA

Upstream 100 bases:

>100_bases
TCCTGGTCCTGCTGCCGCTGTCGGCCCGGACGGAACGCCATGTCGTCCTGCCGGAAAGCATAGCCGCCGCCCAAGGGCAC
CACGCCACGGGGCACGACGC

Downstream 100 bases:

>100_bases
TCCCGCACCCAGCCCGTCCGACGCGGACGTGATCGAACCCGTCATCGGACTGATCGGCGGGTCCGGCCTGTATGACATCG
ACGGGCTGGAGGAAAAGGAA

Product: cytochrome c

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKKILVAPLAAALCLAAPAVHAAPHAPAPHQDWSFDGPLGRFDMAAVQRGYAVYAQVCSACHSMNAVTYGDLGAMGLTDE
QVRQIAAAQSVPGGVDAQGEPVTRPATAADHFRNPFPSPEAAAAANNGTPPPDQSRLALVYTGGPDRIYALLTGYRTPPA
GYRPSHPGAFYNPYAADGEISMPPPLHDGLVDYADGTPATTAQEARDVTTFLAWVAQPHLAERHRLGIQVTLYLLFLAVL
AFLLKRRIWSDVH

Sequences:

>Translated_253_residues
MKKILVAPLAAALCLAAPAVHAAPHAPAPHQDWSFDGPLGRFDMAAVQRGYAVYAQVCSACHSMNAVTYGDLGAMGLTDE
QVRQIAAAQSVPGGVDAQGEPVTRPATAADHFRNPFPSPEAAAAANNGTPPPDQSRLALVYTGGPDRIYALLTGYRTPPA
GYRPSHPGAFYNPYAADGEISMPPPLHDGLVDYADGTPATTAQEARDVTTFLAWVAQPHLAERHRLGIQVTLYLLFLAVL
AFLLKRRIWSDVH
>Mature_253_residues
MKKILVAPLAAALCLAAPAVHAAPHAPAPHQDWSFDGPLGRFDMAAVQRGYAVYAQVCSACHSMNAVTYGDLGAMGLTDE
QVRQIAAAQSVPGGVDAQGEPVTRPATAADHFRNPFPSPEAAAAANNGTPPPDQSRLALVYTGGPDRIYALLTGYRTPPA
GYRPSHPGAFYNPYAADGEISMPPPLHDGLVDYADGTPATTAQEARDVTTFLAWVAQPHLAERHRLGIQVTLYLLFLAVL
AFLLKRRIWSDVH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21359867, Length=222, Percent_Identity=39.6396396396396, Blast_Score=167, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI17506225, Length=218, Percent_Identity=43.5779816513761, Blast_Score=151, Evalue=4e-37,
Organism=Saccharomyces cerevisiae, GI6324639, Length=251, Percent_Identity=43.4262948207171, Blast_Score=195, Evalue=6e-51,
Organism=Drosophila melanogaster, GI24658292, Length=247, Percent_Identity=41.2955465587045, Blast_Score=182, Evalue=2e-46,
Organism=Drosophila melanogaster, GI21358225, Length=250, Percent_Identity=37.6, Blast_Score=174, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 26912; Mature: 26912

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILVAPLAAALCLAAPAVHAAPHAPAPHQDWSFDGPLGRFDMAAVQRGYAVYAQVCSA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
CHSMNAVTYGDLGAMGLTDEQVRQIAAAQSVPGGVDAQGEPVTRPATAADHFRNPFPSPE
HHHCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCH
AAAAANNGTPPPDQSRLALVYTGGPDRIYALLTGYRTPPAGYRPSHPGAFYNPYAADGEI
HHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
SMPPPLHDGLVDYADGTPATTAQEARDVTTFLAWVAQPHLAERHRLGIQVTLYLLFLAVL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHH
AFLLKRRIWSDVH
HHHHHHHHHHCCC
>Mature Secondary Structure
MKKILVAPLAAALCLAAPAVHAAPHAPAPHQDWSFDGPLGRFDMAAVQRGYAVYAQVCSA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
CHSMNAVTYGDLGAMGLTDEQVRQIAAAQSVPGGVDAQGEPVTRPATAADHFRNPFPSPE
HHHCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCH
AAAAANNGTPPPDQSRLALVYTGGPDRIYALLTGYRTPPAGYRPSHPGAFYNPYAADGEI
HHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
SMPPPLHDGLVDYADGTPATTAQEARDVTTFLAWVAQPHLAERHRLGIQVTLYLLFLAVL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHH
AFLLKRRIWSDVH
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2176269 [H]