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The map label for this gene is petB [H]

Identifier: 162147841

GI number: 162147841

Start: 2101411

End: 2102664

Strand: Reverse

Name: petB [H]

Synonym: GDI_2057

Alternate gene names: 162147841

Gene position: 2102664-2101411 (Counterclockwise)

Preceding gene: 162147844

Following gene: 162147840

Centisome position: 53.31

GC content: 65.71

Gene sequence:

>1254_bases
ATGACGGATTCAGGTTCCGGAGACGCAACGGATCAGCGGGGCGGGACCGGCGTGCTGGCATGGGTGGACGCGCGGCTGCC
GGTCGTCACGGGGTTCCGCCACGAATATATCGACTACCGGACCCCGCGAAACCTGAACGGGCTGTGGAATTTCGGCGCGA
TCCTGACGGTGGTCCTGCTGGTGATGCTGGCCACCGGGATCTTCCTGGCCGTCAACTACACGCCGACCGCCGCCGGCGCC
TTCGCGTCGGTCGAGGCGATCGAGCGCCAGTTGCCCAGTGGCTGGCTGCTGCGGTCGATCCATGTCACCGGTGCCAGCCT
GTTCCTGGCGGCGCTCTATATCCATCTGTTCCGGGGCCTGTATTACGGGTCCTACAAGCGCCCGCGTGAAATCCTGTGGC
TGACGGGCCTGCTGCTGCTGGTCATGGTCATGTTCACCGCCTTCGCGGGATATGTGCTGCCGTGGGGGCAGATGTCGTAC
TGGGGCGCCGACGTGGCGGGCAAGGCCGTGGATGCGATCCCGTTCGTGGGCCCGTGGCTGGAACATTTCCTGCAGGGCGG
CGACGCGCCGGGTGACGTGTCGCTGCACCGGTTCTTCGTCCTGCATTTCGTCCTGGCGTTCGCGGTGCTGGGCGTCGTGG
TCCTGCATGTCGCGGCGCTGCACGTCACCGGGTCGAACAATCCGCTGGGGATCGAACCGAAGGGCCCGCGCGATACGCTG
ACCTTCCACCCCTATTATACCAGCAAGGACGCGCTGGGCATGATCCTGTTCGCGCTGCTGTTCGCCGCGCTGGTGTTCTT
CCTGCCGCACGTGGTGTTCGAGGCGGAAAATTTCCGGCCGGCCAATCCGCTGCACACGCCGGCGGATATCGAACCGGAAT
GGTATTTCCTGCCCTTCTACGGAATGCTGCAATCGGTGCCGTCGAAATTCGGCGGCCTGCTGGCGGCCGTGGGGTCCATC
CTGATCCTGTTCCTGGTGCCGTGGCTGGACCGCTCGCCGATCCGCTCGGCCCGGTTTCGCCCGTTCTACCGGGTGTGCAT
GGTGCTGCTGGTGCTGTGCTTCATCCTGCTGGGCTTCGTCGGCCGCCACCATGCCGAAGGCGGGTGGATGATCGCCGGGC
GGATCGCGCTGGTCTATTATTTCGCGCATTTCCTGGTCCTGCTGCCGCTGTCGGCCCGGACGGAACGCCATGTCGTCCTG
CCGGAAAGCATAGCCGCCGCCCAAGGGCACCACGCCACGGGGCACGACGCATGA

Upstream 100 bases:

>100_bases
CCGGTGCCCGTTCGCGCGGACGATTGCAAGAAGCCCCCCCTGCCCGGTAAGGAGTGCGAAAGACACCGCACCGTCCCGTG
CGGCACGGAAGGATGGATGA

Downstream 100 bases:

>100_bases
AGAAGATACTGGTCGCGCCGCTTGCCGCGGCGCTGTGCCTGGCCGCGCCCGCCGTCCATGCCGCCCCCCATGCCCCGGCC
CCCCATCAGGACTGGAGCTT

Product: cytochrome b

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MTDSGSGDATDQRGGTGVLAWVDARLPVVTGFRHEYIDYRTPRNLNGLWNFGAILTVVLLVMLATGIFLAVNYTPTAAGA
FASVEAIERQLPSGWLLRSIHVTGASLFLAALYIHLFRGLYYGSYKRPREILWLTGLLLLVMVMFTAFAGYVLPWGQMSY
WGADVAGKAVDAIPFVGPWLEHFLQGGDAPGDVSLHRFFVLHFVLAFAVLGVVVLHVAALHVTGSNNPLGIEPKGPRDTL
TFHPYYTSKDALGMILFALLFAALVFFLPHVVFEAENFRPANPLHTPADIEPEWYFLPFYGMLQSVPSKFGGLLAAVGSI
LILFLVPWLDRSPIRSARFRPFYRVCMVLLVLCFILLGFVGRHHAEGGWMIAGRIALVYYFAHFLVLLPLSARTERHVVL
PESIAAAQGHHATGHDA

Sequences:

>Translated_417_residues
MTDSGSGDATDQRGGTGVLAWVDARLPVVTGFRHEYIDYRTPRNLNGLWNFGAILTVVLLVMLATGIFLAVNYTPTAAGA
FASVEAIERQLPSGWLLRSIHVTGASLFLAALYIHLFRGLYYGSYKRPREILWLTGLLLLVMVMFTAFAGYVLPWGQMSY
WGADVAGKAVDAIPFVGPWLEHFLQGGDAPGDVSLHRFFVLHFVLAFAVLGVVVLHVAALHVTGSNNPLGIEPKGPRDTL
TFHPYYTSKDALGMILFALLFAALVFFLPHVVFEAENFRPANPLHTPADIEPEWYFLPFYGMLQSVPSKFGGLLAAVGSI
LILFLVPWLDRSPIRSARFRPFYRVCMVLLVLCFILLGFVGRHHAEGGWMIAGRIALVYYFAHFLVLLPLSARTERHVVL
PESIAAAQGHHATGHDA
>Mature_416_residues
TDSGSGDATDQRGGTGVLAWVDARLPVVTGFRHEYIDYRTPRNLNGLWNFGAILTVVLLVMLATGIFLAVNYTPTAAGAF
ASVEAIERQLPSGWLLRSIHVTGASLFLAALYIHLFRGLYYGSYKRPREILWLTGLLLLVMVMFTAFAGYVLPWGQMSYW
GADVAGKAVDAIPFVGPWLEHFLQGGDAPGDVSLHRFFVLHFVLAFAVLGVVVLHVAALHVTGSNNPLGIEPKGPRDTLT
FHPYYTSKDALGMILFALLFAALVFFLPHVVFEAENFRPANPLHTPADIEPEWYFLPFYGMLQSVPSKFGGLLAAVGSIL
ILFLVPWLDRSPIRSARFRPFYRVCMVLLVLCFILLGFVGRHHAEGGWMIAGRIALVYYFAHFLVLLPLSARTERHVVLP
ESIAAAQGHHATGHDA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=373, Percent_Identity=43.4316353887399, Blast_Score=282, Evalue=4e-76,
Organism=Saccharomyces cerevisiae, GI6226529, Length=360, Percent_Identity=40.2777777777778, Blast_Score=280, Evalue=4e-76,
Organism=Saccharomyces cerevisiae, GI6226532, Length=236, Percent_Identity=40.6779661016949, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6226531, Length=151, Percent_Identity=43.046357615894, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6226530, Length=126, Percent_Identity=42.8571428571429, Blast_Score=111, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 45990; Mature: 45859

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSGSGDATDQRGGTGVLAWVDARLPVVTGFRHEYIDYRTPRNLNGLWNFGAILTVVLL
CCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VMLATGIFLAVNYTPTAAGAFASVEAIERQLPSGWLLRSIHVTGASLFLAALYIHLFRGL
HHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
YYGSYKRPREILWLTGLLLLVMVMFTAFAGYVLPWGQMSYWGADVAGKAVDAIPFVGPWL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHH
EHFLQGGDAPGDVSLHRFFVLHFVLAFAVLGVVVLHVAALHVTGSNNPLGIEPKGPRDTL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCE
TFHPYYTSKDALGMILFALLFAALVFFLPHVVFEAENFRPANPLHTPADIEPEWYFLPFY
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECHH
GMLQSVPSKFGGLLAAVGSILILFLVPWLDRSPIRSARFRPFYRVCMVLLVLCFILLGFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHH
GRHHAEGGWMIAGRIALVYYFAHFLVLLPLSARTERHVVLPESIAAAQGHHATGHDA
HCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TDSGSGDATDQRGGTGVLAWVDARLPVVTGFRHEYIDYRTPRNLNGLWNFGAILTVVLL
CCCCCCCCCCCCCCCEEEEEECCCCCHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VMLATGIFLAVNYTPTAAGAFASVEAIERQLPSGWLLRSIHVTGASLFLAALYIHLFRGL
HHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
YYGSYKRPREILWLTGLLLLVMVMFTAFAGYVLPWGQMSYWGADVAGKAVDAIPFVGPWL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHH
EHFLQGGDAPGDVSLHRFFVLHFVLAFAVLGVVVLHVAALHVTGSNNPLGIEPKGPRDTL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCE
TFHPYYTSKDALGMILFALLFAALVFFLPHVVFEAENFRPANPLHTPADIEPEWYFLPFY
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECHH
GMLQSVPSKFGGLLAAVGSILILFLVPWLDRSPIRSARFRPFYRVCMVLLVLCFILLGFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHH
GRHHAEGGWMIAGRIALVYYFAHFLVLLPLSARTERHVVLPESIAAAQGHHATGHDA
HCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA