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The map label for this gene is cyoD [H]

Identifier: 162147816

GI number: 162147816

Start: 2075583

End: 2075915

Strand: Reverse

Name: cyoD [H]

Synonym: GDI_2032

Alternate gene names: 162147816

Gene position: 2075915-2075583 (Counterclockwise)

Preceding gene: 162147817

Following gene: 162147812

Centisome position: 52.63

GC content: 61.56

Gene sequence:

>333_bases
ATGGCTGACGCGCACACTGCCCATTCGGGCTCGAGCCACGGAAGCGTAGGGTCTTACCTTACCGGGTTCGTGATTTCCGT
CGTGCTGACGGCGGCGGCCTTCGGCGTCGTCATGGCGCACAGCTTCTCGCCGTCCGGCACGATTGCCGCCATCGCCATCC
TGGCGGCGGTGCAGGTCGTGGTTCATCTGGTGTTCTTCCTCCACATGAACACGTCGTCCGAGCAGCGTTGGAACGTGATG
GCCTTCGTCTTCACGGTTACGGCGGTGCTGATCCTGATCGTCGGCACCGTGTTCATCATGCACGACACCGCGATCAACAT
GATGTCGCGGTAA

Upstream 100 bases:

>100_bases
GGATGATGAACAAGCTGACCTGCCTCAGCCTGTTCTGGCACTTTCTGGACATCGTCTGGATCTGTGTCTTCACCTTTGTC
TATCTGATGAGTGTGATCTG

Downstream 100 bases:

>100_bases
CAGCCATCATCCAGGTGCCCCCGGGCACCTGGGTCCTGGACTGTCCGCATGGAGAGCGTGACCGGGTTTCGGCCCGGTCA
CGTTTTTCATTGAAAAAGGC

Product: cytochrome o ubiquinol oxidase protein cyoD

Products: NA

Alternate protein names: Ubiquinol oxidase chain D [H]

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MADAHTAHSGSSHGSVGSYLTGFVISVVLTAAAFGVVMAHSFSPSGTIAAIAILAAVQVVVHLVFFLHMNTSSEQRWNVM
AFVFTVTAVLILIVGTVFIMHDTAINMMSR

Sequences:

>Translated_110_residues
MADAHTAHSGSSHGSVGSYLTGFVISVVLTAAAFGVVMAHSFSPSGTIAAIAILAAVQVVVHLVFFLHMNTSSEQRWNVM
AFVFTVTAVLILIVGTVFIMHDTAINMMSR
>Mature_109_residues
ADAHTAHSGSSHGSVGSYLTGFVISVVLTAAAFGVVMAHSFSPSGTIAAIAILAAVQVVVHLVFFLHMNTSSEQRWNVMA
FVFTVTAVLILIVGTVFIMHDTAINMMSR

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=103, Percent_Identity=52.4271844660194, Blast_Score=109, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: 1.10.3.-

Molecular weight: Translated: 11594; Mature: 11463

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADAHTAHSGSSHGSVGSYLTGFVISVVLTAAAFGVVMAHSFSPSGTIAAIAILAAVQVV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VHLVFFLHMNTSSEQRWNVMAFVFTVTAVLILIVGTVFIMHDTAINMMSR
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADAHTAHSGSSHGSVGSYLTGFVISVVLTAAAFGVVMAHSFSPSGTIAAIAILAAVQVV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VHLVFFLHMNTSSEQRWNVMAFVFTVTAVLILIVGTVFIMHDTAINMMSR
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]