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The map label for this gene is degT [H]

Identifier: 162147807

GI number: 162147807

Start: 2064751

End: 2065893

Strand: Reverse

Name: degT [H]

Synonym: GDI_2023

Alternate gene names: 162147807

Gene position: 2065893-2064751 (Counterclockwise)

Preceding gene: 162147808

Following gene: 162147806

Centisome position: 52.38

GC content: 69.55

Gene sequence:

>1143_bases
ATGACCGCCTCCCCCGAGACGCTTTCCCCCATCGCGTTCCTCGACCTGCCCGCGCAGCAGGCGCGGCTGGGCGACGCCAT
CCGGCGGCGGGTGGATGCCGTCATGGCGCATTGCCGTTTCGTGATGGGACCCGAGGTGGCGGAACTGGAACAGGCCCTGG
CCACCTATGCCGGCGCCAGGGAATGCGTCGGCGTGTCGTCGGGCACCGATGCGATCCAGATCGTCATGATGGCCGAGGGC
ATCGGACCCGGCGACGCGGTCTTCCTGCCGGCCTTCACCTATACCGCGACGGCCGAGGTGCCGCTGCTGCTGCACGCGAC
GCCGGTCTTCGTCGATGTCGATCCCCGGACGTTCCAGATCGACCCGGCCAGCCTGGAGAAGCGGATTGCCGATGTCCGCT
CCGCCGGAACCCTGCGACCGCGTGCCATCGTGGGCGTGGACCTGTTCGGCCAGCCGGCCCCCTGGCCCGAATTGCGGGCC
ATCGCGGCGCGCGAGGGGCTGTTCCTGATGGACGATTGCGCGCAATCGTTCGGTGGCGCGCTGACGGGACGCAAGCTGGG
GCGCGAGGCCACGGCCACCACGCTGTCCTTCTTCCCGTCCAAGCCGCTGGGCAGCTACGGCGACGGCGGCGCGATCCTGA
CCGACGACCCCGAGCGCGCGGACCTCTACCGTTCGCTGCGCACCCACGGCGAGGGCAAGACGCGATACGAGGTCCTGCGG
ACCGGCATGAACGGCCGCCTGGATACGCTCCAGGCCGCGGTGCTGCTGGCGAAGCTGGAAGGATTCGATGCCGAACTGGC
CCGGCGGGAGGAGATTGCCGGCGCCTACGATGCCGGCCTGGCCCACCATGTCACCACCCCCGCGCGCGTCCCGGATTCGC
ACAGCGCGTGGGCGATCTATGCCGTGCTGGTGGAAAGCGAGGCCGCACGCGCGGCGTTGCAGGAGCGGCTGCGCGCGAAG
GGCGTGCCTTCGGCGATCTATTATCCCCGTCCCCTGCACCTGCAGCCCGCATATCAGGCCCATCACGACGGCACGTGCTT
GCCTGTTGCCGAAGATCTGTCTTCCCGTATTCTCGCGCTGCCCATTCACCCCGAACTGACGGACGCGGACGTCGCGCGGG
TCATCGCGGCGGTTCGCGGATAA

Upstream 100 bases:

>100_bases
CGCTGATCGGGAGCCTCGTTCCCGAATTCGCCCATAACCCGACCGGCGACGTGCGCGATATGCTCGCGGACCCGACCGAC
GCCGAAAGGACCATGACCCC

Downstream 100 bases:

>100_bases
GACGAGAGAGACCGAGACCATGAAACGGGAAAACGCGCTGCTGCTGGGGATTCTGGGATGCCTGGCGTTCGCGGTGGCCA
CTGCGACGGTGGTATGGTCG

Product: aminotransferase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTASPETLSPIAFLDLPAQQARLGDAIRRRVDAVMAHCRFVMGPEVAELEQALATYAGARECVGVSSGTDAIQIVMMAEG
IGPGDAVFLPAFTYTATAEVPLLLHATPVFVDVDPRTFQIDPASLEKRIADVRSAGTLRPRAIVGVDLFGQPAPWPELRA
IAAREGLFLMDDCAQSFGGALTGRKLGREATATTLSFFPSKPLGSYGDGGAILTDDPERADLYRSLRTHGEGKTRYEVLR
TGMNGRLDTLQAAVLLAKLEGFDAELARREEIAGAYDAGLAHHVTTPARVPDSHSAWAIYAVLVESEAARAALQERLRAK
GVPSAIYYPRPLHLQPAYQAHHDGTCLPVAEDLSSRILALPIHPELTDADVARVIAAVRG

Sequences:

>Translated_380_residues
MTASPETLSPIAFLDLPAQQARLGDAIRRRVDAVMAHCRFVMGPEVAELEQALATYAGARECVGVSSGTDAIQIVMMAEG
IGPGDAVFLPAFTYTATAEVPLLLHATPVFVDVDPRTFQIDPASLEKRIADVRSAGTLRPRAIVGVDLFGQPAPWPELRA
IAAREGLFLMDDCAQSFGGALTGRKLGREATATTLSFFPSKPLGSYGDGGAILTDDPERADLYRSLRTHGEGKTRYEVLR
TGMNGRLDTLQAAVLLAKLEGFDAELARREEIAGAYDAGLAHHVTTPARVPDSHSAWAIYAVLVESEAARAALQERLRAK
GVPSAIYYPRPLHLQPAYQAHHDGTCLPVAEDLSSRILALPIHPELTDADVARVIAAVRG
>Mature_379_residues
TASPETLSPIAFLDLPAQQARLGDAIRRRVDAVMAHCRFVMGPEVAELEQALATYAGARECVGVSSGTDAIQIVMMAEGI
GPGDAVFLPAFTYTATAEVPLLLHATPVFVDVDPRTFQIDPASLEKRIADVRSAGTLRPRAIVGVDLFGQPAPWPELRAI
AAREGLFLMDDCAQSFGGALTGRKLGREATATTLSFFPSKPLGSYGDGGAILTDDPERADLYRSLRTHGEGKTRYEVLRT
GMNGRLDTLQAAVLLAKLEGFDAELARREEIAGAYDAGLAHHVTTPARVPDSHSAWAIYAVLVESEAARAALQERLRAKG
VPSAIYYPRPLHLQPAYQAHHDGTCLPVAEDLSSRILALPIHPELTDADVARVIAAVRG

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=365, Percent_Identity=33.4246575342466, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI2367285, Length=347, Percent_Identity=29.1066282420749, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 40692; Mature: 40561

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASPETLSPIAFLDLPAQQARLGDAIRRRVDAVMAHCRFVMGPEVAELEQALATYAGAR
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHH
ECVGVSSGTDAIQIVMMAEGIGPGDAVFLPAFTYTATAEVPLLLHATPVFVDVDPRTFQI
HHCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCEEEEECCEEEEECCCCEEEE
DPASLEKRIADVRSAGTLRPRAIVGVDLFGQPAPWPELRAIAAREGLFLMDDCAQSFGGA
CHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCEEEHHHHHHHHCCC
LTGRKLGREATATTLSFFPSKPLGSYGDGGAILTDDPERADLYRSLRTHGEGKTRYEVLR
HHHHHHCCHHHHHHHEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHH
TGMNGRLDTLQAAVLLAKLEGFDAELARREEIAGAYDAGLAHHVTTPARVPDSHSAWAIY
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCHHHCCCCCCCCCCCCCEEEE
AVLVESEAARAALQERLRAKGVPSAIYYPRPLHLQPAYQAHHDGTCLPVAEDLSSRILAL
EEEHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHCCCCCCCCCHHHHHCCCEEEE
PIHPELTDADVARVIAAVRG
ECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TASPETLSPIAFLDLPAQQARLGDAIRRRVDAVMAHCRFVMGPEVAELEQALATYAGAR
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHH
ECVGVSSGTDAIQIVMMAEGIGPGDAVFLPAFTYTATAEVPLLLHATPVFVDVDPRTFQI
HHCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCEEEEECCEEEEECCCCEEEE
DPASLEKRIADVRSAGTLRPRAIVGVDLFGQPAPWPELRAIAAREGLFLMDDCAQSFGGA
CHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCEEEHHHHHHHHCCC
LTGRKLGREATATTLSFFPSKPLGSYGDGGAILTDDPERADLYRSLRTHGEGKTRYEVLR
HHHHHHCCHHHHHHHEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHH
TGMNGRLDTLQAAVLLAKLEGFDAELARREEIAGAYDAGLAHHVTTPARVPDSHSAWAIY
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCHHHCCCCCCCCCCCCCEEEE
AVLVESEAARAALQERLRAKGVPSAIYYPRPLHLQPAYQAHHDGTCLPVAEDLSSRILAL
EEEHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHCCCCCCCCCHHHHHCCCEEEE
PIHPELTDADVARVIAAVRG
ECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]