Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is hyuC [H]

Identifier: 162147789

GI number: 162147789

Start: 2042965

End: 2044299

Strand: Direct

Name: hyuC [H]

Synonym: GDI_2005

Alternate gene names: 162147789

Gene position: 2042965-2044299 (Clockwise)

Preceding gene: 162147775

Following gene: 162147790

Centisome position: 51.8

GC content: 68.46

Gene sequence:

>1335_bases
GTGAATTTCGGAGATCAGCAGGCCACTAAAATATTGATTTGGCTGGTGTCCAGCAGGAGGAACAGGATGAGCGGCACGGG
TGGTCTTCGCAAGGGCGACAACATCACCGTGAATGGCGCGGCGTTATGGGACGACATCCTGCACACCGCCCGGTTCGGCG
GCACGCCCAAGGGCGGGATCAGGCGCCTGACGCTGACCGAGGAAGACCGGCTGGTCCGCGCGTGGTTCGAGGCCGCCTGC
CGGCAGGTCGGCTGCACCGTCACCCATGATTCGCTGGGCAACCAGTTCGCCCGCCGCCCGGGGCGCGACGACAGCCTGCC
GCCGATCACGATCGGCAGCCATCTGGATACCCAGCCCACCGGCGGCAAGTTCGACGGGATCGTCGGCGTGCTGGGCGGCC
TGGCCGTGCTGCGGGCGCTGCATGCGTCGGGCCACGAGACCCGGCATCCGATCGAACTGATCAACTGGACGAACGAGGAA
GGGGCGCGCTTCGCCCCGGCCATGCTGGCCTCGGGCGTGTTCGCCGGCGTGTTCACCGAACAGGAAGCCCTGGACAAGAC
CGACCGCGCGGGAATCCGTTTCGAGGACGCGCTGGTCGGAATCGGCTATCGCGGCAGCGAGCCCTGCGGGCAGCATCCGG
TGTCGGCCTATTTCGAACTGCATATCGAGCAGGGACCGATCCTGGAAGCCCAGCACAAGACGATCGGCATCGTGACCGGC
GTGCAGGGCATACGGTGGTACGAAGTCACGCTGACCGGCCGCGATTCCCATGCCGGCAGCACGCCCATGACGATGCGCGC
CGACGCCCTGCTGGCCGCCGCCCGGATGATCGAGGCGGTGAACCAGGTGGCCCTGGCCTTTGGTCCGGACGCGGTGGGCA
CGGTCGGCCTGATCGAAAGCCGCCCCAACAGCCGCAACGTGGTTCCGGGCGAGGTCTTCTTCACCATCGACCTGCGCCAC
CCGGACGACACGGTGGTGGTGCGAATGGAGGAGGCGATGCGGGCGAAGGTCGCGGCCATCGCCGCCGAATCCGGCGTCGG
CCTGGCGCTGGACTGCGTGTGGGATTCCCCGGCGGTGCATTTCGATCCGGCGTGCATCGGCGCCGTCCGCCGGGCGGCGG
AATCGTTCGGCTATCCGGCACGCGACATCGTATCGGGCGCGGGCCACGACGCGGCCTATCTGGCCCGGGTGACGCCGACC
ACCATGATCTTCGTCCCCTGCGCGGGCGGCCTGAGCCATAACGAGGCCGAAAGCGCCGAACCCGGCGACGTTACCGCCGG
GGCGAACGTGCTGCTGCGGGCGGTGCTGGACGCCGATGCACGGCTGGATGCCTGA

Upstream 100 bases:

>100_bases
TGTGTCACAAGACGCGGGCGGGCATTCACGGTTTTGCGGCTTGCGCGCCGGGCGGATTGCCGAAAACGTAACGCTGGTGT
CCTGCCTCCGAAATTAATAT

Downstream 100 bases:

>100_bases
TCGGGCAGTCGAAGAGGCCTCGAAGAATCATCTGTCCAGCGCGGCGTCCTTGTTCCATCCTCGTGACGATTTCGGAACCG
TGACAGGGTTCTCTGTGCCA

Product: N-carbamoyl-L-amino acid amidohydrolase

Products: beta-alanine; CO2; NH3

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MNFGDQQATKILIWLVSSRRNRMSGTGGLRKGDNITVNGAALWDDILHTARFGGTPKGGIRRLTLTEEDRLVRAWFEAAC
RQVGCTVTHDSLGNQFARRPGRDDSLPPITIGSHLDTQPTGGKFDGIVGVLGGLAVLRALHASGHETRHPIELINWTNEE
GARFAPAMLASGVFAGVFTEQEALDKTDRAGIRFEDALVGIGYRGSEPCGQHPVSAYFELHIEQGPILEAQHKTIGIVTG
VQGIRWYEVTLTGRDSHAGSTPMTMRADALLAAARMIEAVNQVALAFGPDAVGTVGLIESRPNSRNVVPGEVFFTIDLRH
PDDTVVVRMEEAMRAKVAAIAAESGVGLALDCVWDSPAVHFDPACIGAVRRAAESFGYPARDIVSGAGHDAAYLARVTPT
TMIFVPCAGGLSHNEAESAEPGDVTAGANVLLRAVLDADARLDA

Sequences:

>Translated_444_residues
MNFGDQQATKILIWLVSSRRNRMSGTGGLRKGDNITVNGAALWDDILHTARFGGTPKGGIRRLTLTEEDRLVRAWFEAAC
RQVGCTVTHDSLGNQFARRPGRDDSLPPITIGSHLDTQPTGGKFDGIVGVLGGLAVLRALHASGHETRHPIELINWTNEE
GARFAPAMLASGVFAGVFTEQEALDKTDRAGIRFEDALVGIGYRGSEPCGQHPVSAYFELHIEQGPILEAQHKTIGIVTG
VQGIRWYEVTLTGRDSHAGSTPMTMRADALLAAARMIEAVNQVALAFGPDAVGTVGLIESRPNSRNVVPGEVFFTIDLRH
PDDTVVVRMEEAMRAKVAAIAAESGVGLALDCVWDSPAVHFDPACIGAVRRAAESFGYPARDIVSGAGHDAAYLARVTPT
TMIFVPCAGGLSHNEAESAEPGDVTAGANVLLRAVLDADARLDA
>Mature_444_residues
MNFGDQQATKILIWLVSSRRNRMSGTGGLRKGDNITVNGAALWDDILHTARFGGTPKGGIRRLTLTEEDRLVRAWFEAAC
RQVGCTVTHDSLGNQFARRPGRDDSLPPITIGSHLDTQPTGGKFDGIVGVLGGLAVLRALHASGHETRHPIELINWTNEE
GARFAPAMLASGVFAGVFTEQEALDKTDRAGIRFEDALVGIGYRGSEPCGQHPVSAYFELHIEQGPILEAQHKTIGIVTG
VQGIRWYEVTLTGRDSHAGSTPMTMRADALLAAARMIEAVNQVALAFGPDAVGTVGLIESRPNSRNVVPGEVFFTIDLRH
PDDTVVVRMEEAMRAKVAAIAAESGVGLALDCVWDSPAVHFDPACIGAVRRAAESFGYPARDIVSGAGHDAAYLARVTPT
TMIFVPCAGGLSHNEAESAEPGDVTAGANVLLRAVLDADARLDA

Specific function: Converts N-carbamyl-L-amino acids to L-amino acids [H]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=384, Percent_Identity=32.5520833333333, Blast_Score=203, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.5.1.6

Molecular weight: Translated: 47268; Mature: 47268

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFGDQQATKILIWLVSSRRNRMSGTGGLRKGDNITVNGAALWDDILHTARFGGTPKGGI
CCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCE
RRLTLTEEDRLVRAWFEAACRQVGCTVTHDSLGNQFARRPGRDDSLPPITIGSHLDTQPT
EEEEECCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC
GGKFDGIVGVLGGLAVLRALHASGHETRHPIELINWTNEEGARFAPAMLASGVFAGVFTE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
QEALDKTDRAGIRFEDALVGIGYRGSEPCGQHPVSAYFELHIEQGPILEAQHKTIGIVTG
HHHHCCHHCCCCEEEHEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCEEEEEEC
VQGIRWYEVTLTGRDSHAGSTPMTMRADALLAAARMIEAVNQVALAFGPDAVGTVGLIES
CCCEEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEC
RPNSRNVVPGEVFFTIDLRHPDDTVVVRMEEAMRAKVAAIAAESGVGLALDCVWDSPAVH
CCCCCCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCE
FDPACIGAVRRAAESFGYPARDIVSGAGHDAAYLARVTPTTMIFVPCAGGLSHNEAESAE
ECHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC
PGDVTAGANVLLRAVLDADARLDA
CCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNFGDQQATKILIWLVSSRRNRMSGTGGLRKGDNITVNGAALWDDILHTARFGGTPKGGI
CCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCE
RRLTLTEEDRLVRAWFEAACRQVGCTVTHDSLGNQFARRPGRDDSLPPITIGSHLDTQPT
EEEEECCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC
GGKFDGIVGVLGGLAVLRALHASGHETRHPIELINWTNEEGARFAPAMLASGVFAGVFTE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
QEALDKTDRAGIRFEDALVGIGYRGSEPCGQHPVSAYFELHIEQGPILEAQHKTIGIVTG
HHHHCCHHCCCCEEEHEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCEEEEEEC
VQGIRWYEVTLTGRDSHAGSTPMTMRADALLAAARMIEAVNQVALAFGPDAVGTVGLIES
CCCEEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEC
RPNSRNVVPGEVFFTIDLRHPDDTVVVRMEEAMRAKVAAIAAESGVGLALDCVWDSPAVH
CCCCCCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCE
FDPACIGAVRRAAESFGYPARDIVSGAGHDAAYLARVTPTTMIFVPCAGGLSHNEAESAE
ECHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC
PGDVTAGANVLLRAVLDADARLDA
CCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-carbamoyl-beta-alanine; H2O

Specific reaction: N-carbamoyl-beta-alanine + H2O = beta-alanine + CO2 + NH3

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1732229 [H]