| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is ygjG [C]
Identifier: 162147790
GI number: 162147790
Start: 2044451
End: 2045764
Strand: Direct
Name: ygjG [C]
Synonym: GDI_2006
Alternate gene names: 162147790
Gene position: 2044451-2045764 (Clockwise)
Preceding gene: 162147789
Following gene: 162147791
Centisome position: 51.83
GC content: 68.26
Gene sequence:
>1314_bases ATGCCGCCGACCAATCACGACGCGTTCTGGATGCCGTTCACCGCCAACCGCCAGTTCCGCAAGACGCCGCGCATGCTGGT GGCGGCCGACGGCATGTATTACACCACCGACGACGGGCGAAAGGTGCTGGATGGCTGCGCCGGCCTGTGGTGCGTGAACG CGGGCCATAACCGCCCGCGCATCACCCAGGCGGTGCAGAAGACGATCGCGACGCTGGATTTCGCGCCGACCTTCCAGATG GGCCACCCGCTGGCCTTCGAGGCCGCGGACCGGATCGCGGCCCTGGCGCCCGGCGACCTGAACCATGTCTTCTTCTGCAA TTCGGGCTCCGAGGCCATGGATTCGGCGCTGAAGATCGCCCTCGCCTATCACCGCGTGCGGGGCGAGGGCGCGCGCACGC GCCTGATCGGGCGCGAGCGCGGATATCACGGCGTGGGGTTCGGCGGCATTTCCGTGGGCGGCCTGTCCGGCAACCGCAAG CTGTACGGGTCGCTGCTGACCGGGGTCGACCACCTGCCGCACACGCTGGATATCGAACGGAACGCGTTCACCAGGGGGCT GCCCGCCCACGGCGCGGAACTGGCGGACAACCTGGAACGCATCGTCGCGCTGCATGACGCATCCACCATCGCCGCCGTGG TGGTCGAACCGATGGCCGGATCGACCGGCGTGCTGCCGCCGCCGGTCGGCTACCTGAAGCGCCTGCGCGAGATCTGCGAC AAATACGGCATCCTGCTGATCTTCGACGAGGTCATCACCGGGTTCGGCCGCCTGGGCGGCACTCCCTTCGCGGCCGAGAA ATTCGGCGTGCTGCCCGATATCCTGGCCTGCGCCAAGGGCGTGACCAACGGGACCATCCCCATGGGCGCCGCCATCGCGC GCGACCATGTGCACGCGGCGTTCATGACCGGGCCGGAAACCGGGATCGAACTGCCGCACGGCTATACCTATTCGGGCCAC CCCGTGGCCTGCGCCGCCGCGATCGCGACCCTGGACACCTACGCCGAGGAGAACCTGTTCGAGCGCGCGGGCGACATCGC GCCCTATTTCGAGGAAGCGGTCCACGCGTTGCGCGGCCTGCCGCATGTCATCGACATCCGCAATGTGGGGCTGGTGGCCG GCATCGAACTGGCGTCCCGTCCCGGCGCGGTGGGCGCCAGGGCGTACGAGGTCTTCGACCGCGCGTTCCACAAGGGAATC CTGGTCCGCTACACCGGCGACGTGGTCGCCGTCTCGCCGCCGCTGATCATCGAAAAATCGCAGATCGACCAGGTGTTCGG CACCCTGGCCGACATCATCCACGCCGTCGAATAG
Upstream 100 bases:
>100_bases GTTCCATCCTCGTGACGATTTCGGAACCGTGACAGGGTTCTCTGTGCCAGGTTCTCTGTGCCAAGCGGTTCCCCATCATC GATCGCAGGAGCTTCGCGCG
Downstream 100 bases:
>100_bases CGCGGAACGCGAGGCCCGAATGACAGACACCCCGCCCCCTGCGACGGCCGCCGGCTACGATCCCGGCCTGTATAACGCGG ACCTGGCCCCGGTTCCGGCC
Product: beta alanine--pyruvate transaminase
Products: NA
Alternate protein names: Omega-APT; Beta-alanine--pyruvate aminotransferase [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MPPTNHDAFWMPFTANRQFRKTPRMLVAADGMYYTTDDGRKVLDGCAGLWCVNAGHNRPRITQAVQKTIATLDFAPTFQM GHPLAFEAADRIAALAPGDLNHVFFCNSGSEAMDSALKIALAYHRVRGEGARTRLIGRERGYHGVGFGGISVGGLSGNRK LYGSLLTGVDHLPHTLDIERNAFTRGLPAHGAELADNLERIVALHDASTIAAVVVEPMAGSTGVLPPPVGYLKRLREICD KYGILLIFDEVITGFGRLGGTPFAAEKFGVLPDILACAKGVTNGTIPMGAAIARDHVHAAFMTGPETGIELPHGYTYSGH PVACAAAIATLDTYAEENLFERAGDIAPYFEEAVHALRGLPHVIDIRNVGLVAGIELASRPGAVGARAYEVFDRAFHKGI LVRYTGDVVAVSPPLIIEKSQIDQVFGTLADIIHAVE
Sequences:
>Translated_437_residues MPPTNHDAFWMPFTANRQFRKTPRMLVAADGMYYTTDDGRKVLDGCAGLWCVNAGHNRPRITQAVQKTIATLDFAPTFQM GHPLAFEAADRIAALAPGDLNHVFFCNSGSEAMDSALKIALAYHRVRGEGARTRLIGRERGYHGVGFGGISVGGLSGNRK LYGSLLTGVDHLPHTLDIERNAFTRGLPAHGAELADNLERIVALHDASTIAAVVVEPMAGSTGVLPPPVGYLKRLREICD KYGILLIFDEVITGFGRLGGTPFAAEKFGVLPDILACAKGVTNGTIPMGAAIARDHVHAAFMTGPETGIELPHGYTYSGH PVACAAAIATLDTYAEENLFERAGDIAPYFEEAVHALRGLPHVIDIRNVGLVAGIELASRPGAVGARAYEVFDRAFHKGI LVRYTGDVVAVSPPLIIEKSQIDQVFGTLADIIHAVE >Mature_436_residues PPTNHDAFWMPFTANRQFRKTPRMLVAADGMYYTTDDGRKVLDGCAGLWCVNAGHNRPRITQAVQKTIATLDFAPTFQMG HPLAFEAADRIAALAPGDLNHVFFCNSGSEAMDSALKIALAYHRVRGEGARTRLIGRERGYHGVGFGGISVGGLSGNRKL YGSLLTGVDHLPHTLDIERNAFTRGLPAHGAELADNLERIVALHDASTIAAVVVEPMAGSTGVLPPPVGYLKRLREICDK YGILLIFDEVITGFGRLGGTPFAAEKFGVLPDILACAKGVTNGTIPMGAAIARDHVHAAFMTGPETGIELPHGYTYSGHP VACAAAIATLDTYAEENLFERAGDIAPYFEEAVHALRGLPHVIDIRNVGLVAGIELASRPGAVGARAYEVFDRAFHKGIL VRYTGDVVAVSPPLIIEKSQIDQVFGTLADIIHAVE
Specific function: Catalyzes transamination between a variety of omega- amino acids, mono and diamines, and pyruvate. Plays a pivotal role in the metabolism of the omega amino acids [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=429, Percent_Identity=28.4382284382284, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI13994255, Length=430, Percent_Identity=28.1395348837209, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI37574042, Length=437, Percent_Identity=27.2311212814645, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI226442705, Length=434, Percent_Identity=26.9585253456221, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI226442709, Length=397, Percent_Identity=27.455919395466, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI284507298, Length=323, Percent_Identity=29.7213622291022, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI24119277, Length=436, Percent_Identity=26.3761467889908, Blast_Score=117, Evalue=3e-26, Organism=Escherichia coli, GI145693181, Length=394, Percent_Identity=32.48730964467, Blast_Score=187, Evalue=9e-49, Organism=Escherichia coli, GI1786991, Length=409, Percent_Identity=31.7848410757946, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1789016, Length=405, Percent_Identity=30.8641975308642, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1789759, Length=422, Percent_Identity=29.3838862559242, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI1788044, Length=422, Percent_Identity=27.2511848341232, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1787560, Length=441, Percent_Identity=27.437641723356, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI1786349, Length=394, Percent_Identity=31.2182741116751, Blast_Score=107, Evalue=2e-24, Organism=Caenorhabditis elegans, GI32564660, Length=440, Percent_Identity=28.4090909090909, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI25144271, Length=421, Percent_Identity=28.2660332541568, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI71992977, Length=441, Percent_Identity=29.9319727891156, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI25144274, Length=241, Percent_Identity=33.6099585062241, Blast_Score=118, Evalue=7e-27, Organism=Saccharomyces cerevisiae, GI6324386, Length=429, Percent_Identity=27.5058275058275, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323470, Length=433, Percent_Identity=25.1732101616628, Blast_Score=134, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6324432, Length=417, Percent_Identity=26.8585131894484, Blast_Score=128, Evalue=2e-30, Organism=Drosophila melanogaster, GI161085790, Length=439, Percent_Identity=28.7015945330296, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI28574759, Length=445, Percent_Identity=29.2134831460674, Blast_Score=141, Evalue=9e-34, Organism=Drosophila melanogaster, GI21357415, Length=416, Percent_Identity=26.2019230769231, Blast_Score=132, Evalue=6e-31, Organism=Drosophila melanogaster, GI21356575, Length=436, Percent_Identity=28.6697247706422, Blast_Score=129, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.18 [H]
Molecular weight: Translated: 46780; Mature: 46649
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTNHDAFWMPFTANRQFRKTPRMLVAADGMYYTTDDGRKVLDGCAGLWCVNAGHNRPR CCCCCCCCEEEEECCCCHHHCCCCEEEEECCEEEECCCCHHHHHHHCCEEEECCCCCCHH ITQAVQKTIATLDFAPTFQMGHPLAFEAADRIAALAPGDLNHVFFCNSGSEAMDSALKIA HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEECCCCCCEEEEECCCCHHHHHHHHHH LAYHRVRGEGARTRLIGRERGYHGVGFGGISVGGLSGNRKLYGSLLTGVDHLPHTLDIER HHHHHHCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEECCC NAFTRGLPAHGAELADNLERIVALHDASTIAAVVVEPMAGSTGVLPPPVGYLKRLREICD CHHHCCCCCCCHHHHHHHHHHHHHHCCHHEEEHEEECCCCCCCCCCCCHHHHHHHHHHHH KYGILLIFDEVITGFGRLGGTPFAAEKFGVLPDILACAKGVTNGTIPMGAAIARDHVHAA HCCEEEEEHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHEE FMTGPETGIELPHGYTYSGHPVACAAAIATLDTYAEENLFERAGDIAPYFEEAVHALRGL EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC PHVIDIRNVGLVAGIELASRPGAVGARAYEVFDRAFHKGILVRYTGDVVAVSPPLIIEKS CCEEEECCCCEEECCHHCCCCCCCCHHHHHHHHHHHHCCEEEEEECCEEEECCCEEEEHH QIDQVFGTLADIIHAVE HHHHHHHHHHHHHHHCC >Mature Secondary Structure PPTNHDAFWMPFTANRQFRKTPRMLVAADGMYYTTDDGRKVLDGCAGLWCVNAGHNRPR CCCCCCCEEEEECCCCHHHCCCCEEEEECCEEEECCCCHHHHHHHCCEEEECCCCCCHH ITQAVQKTIATLDFAPTFQMGHPLAFEAADRIAALAPGDLNHVFFCNSGSEAMDSALKIA HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEECCCCCCEEEEECCCCHHHHHHHHHH LAYHRVRGEGARTRLIGRERGYHGVGFGGISVGGLSGNRKLYGSLLTGVDHLPHTLDIER HHHHHHCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEECCC NAFTRGLPAHGAELADNLERIVALHDASTIAAVVVEPMAGSTGVLPPPVGYLKRLREICD CHHHCCCCCCCHHHHHHHHHHHHHHCCHHEEEHEEECCCCCCCCCCCCHHHHHHHHHHHH KYGILLIFDEVITGFGRLGGTPFAAEKFGVLPDILACAKGVTNGTIPMGAAIARDHVHAA HCCEEEEEHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHEE FMTGPETGIELPHGYTYSGHPVACAAAIATLDTYAEENLFERAGDIAPYFEEAVHALRGL EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC PHVIDIRNVGLVAGIELASRPGAVGARAYEVFDRAFHKGILVRYTGDVVAVSPPLIIEKS CCEEEECCCCEEECCHHCCCCCCCCHHHHHHHHHHHHCCEEEEEECCEEEECCCEEEEHH QIDQVFGTLADIIHAVE HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1618757; 6822556; 2500426 [H]