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The map label for this gene is yagA [C]

Identifier: 162147767

GI number: 162147767

Start: 2015730

End: 2017028

Strand: Direct

Name: yagA [C]

Synonym: GDI_1983

Alternate gene names: 162147767

Gene position: 2015730-2017028 (Clockwise)

Preceding gene: 162147766

Following gene: 162147770

Centisome position: 51.11

GC content: 59.97

Gene sequence:

>1299_bases
ATGGGCCAGGTTCACCACGGAAGCGCCACGACGACAGCGGCAGTCCGTCGAGCGATACAACATAGTCAAGAGAGCCTGAG
GGTTCTGGCGAAACGCTACGGGATCAACCCGAAGACGGTCGCCAAATGGAAGGGGCGGACCGATACGTCGGATCGACGCA
CCGGTCCGAAGGTCGCATCCTCAACCATCCTGTCGACCGAAGAAGAAGCGATCGTTGTGGCCTTCCGTCGCCATACCCTG
CTGCCTCTTGATGATTGCCTTTATGCGCTTCAGGCGACGATCCCGCATCTGACGCGATCTTCCCTGCACCGTTGTTTTCA
GCGCCATGGGATCAGCCGCCTGCCCGAGACCGAAGGCGACAAACCAAAACGGTCGAAGTTCAAGAGTTATCCGATCGGCT
ATTTTCACATCGACATTGCTGAAGTCCGCACTGAAATGGGGCGCCTTTATCTTCTGGTGGCGATCGACCGGACCTCGAAA
TTCGCTTTTGTCCAATTGCACGAGAAAGCGACACGTCGCGTTGCCGGTGACTTCCTGCGTGCTCTGGCCGCTGCGGTTCC
CTACCGCATCCATACCGTGCTGACCGATAACGGCACGCATTTTACCGATCCGGCCGGCAATGGATGGACACCCGAAGACA
TCAAGGCCATGCGGGCGGATGGTGTCCTGTTCCGGTGCCACTCTTTTGAACTGGCCTGTGCTGATCTCGATATCGAGCAT
CGACTGACAAAGCCGCGACATCCCTGGACGAATGGCCAGGTCGAGAGGATGAACCGCACGATCAAGGACGCCACCGTCAA
GCGCTTCTACTACGAAACACATGACCAGTTGCGTCAACACCTCGCCGACTTCGTTACCGCCTACAATTTCGCCCGCAGGC
TCAAGACCCTGCGCGGCCTCACTCCATATGAATTCATTTGTCAGCAGTGGGAAAAAGAACCATCACGGTTCATACATAAT
CCGCACCACCAAATCCCGGGACAAAACACCTACTCGACCTTCGGGGCGCGGTTCGCCGGCACGGTCCGGGTGGGCGGCGT
CGCGCTGACGCCCAATGCGACGCTGGGCTATCGCCACGCCTTCGGCCTGACCACGCCGACCACGCGCGAGGCGTTCCTGG
CCGGCGGCAACGCGTTCGACGTCGCGGGCGTGCCGCTGTCCACCGACGCGGCGGTGCTGAAGGCGGGGCTGCAGGCGAAG
CTGACCGACAGGCTGAATGTCGGCCTCTCCTATGTCGGGCAGTATGGCGACCACTCCACCGACAGCGGCCTGACCGGTAA
CGTCAAGGTCACGTTCTGA

Upstream 100 bases:

>100_bases
GGCGGCGCTGGCCGGCCGGGCCATGGATACCGGCGTCACCTACTTGTTTGGTCCCGGGATTTGGTGGTGCATTATTTTCA
CATGAGTGGAAGGATGCGCT

Downstream 100 bases:

>100_bases
TCCCACCGCCCGTTCAGGGCCTGGGGGCGGAGTCCCACCTGGCGCGCATGCGCGCCAGGACGGCATCGTCGGTGCGTTCG
AACCGCAGGGGCGTGACCGC

Product: integrase

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Transcriptional Regulator; Outer Membrane Autotransporter; Integrase; Integrase Catalytic Domain-Containing Protein; Outer Membrane Autotransporter Barrel; Outer Membrane Autotransporter Barrel Domain Protein; Integrase Protein; Integrase Catalytic Core; Autotransporter; Fis Family Transcriptional Regulator; ISKpn8 Transposase; LOW QUALITY PROTEIN Integrase Catalytic Subunit; Serine Protease/Outer Membrane Autotransporter; Hypothethical Protein Transposase; Serine Protease; Serine Proteinase; Instegrase; Autotransporter Protein; Transposase Of

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MGQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVASSTILSTEEEAIVVAFRRHTL
LPLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGDKPKRSKFKSYPIGYFHIDIAEVRTEMGRLYLLVAIDRTSK
FAFVQLHEKATRRVAGDFLRALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEH
RLTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEKEPSRFIHN
PHHQIPGQNTYSTFGARFAGTVRVGGVALTPNATLGYRHAFGLTTPTTREAFLAGGNAFDVAGVPLSTDAAVLKAGLQAK
LTDRLNVGLSYVGQYGDHSTDSGLTGNVKVTF

Sequences:

>Translated_432_residues
MGQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVASSTILSTEEEAIVVAFRRHTL
LPLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGDKPKRSKFKSYPIGYFHIDIAEVRTEMGRLYLLVAIDRTSK
FAFVQLHEKATRRVAGDFLRALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEH
RLTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEKEPSRFIHN
PHHQIPGQNTYSTFGARFAGTVRVGGVALTPNATLGYRHAFGLTTPTTREAFLAGGNAFDVAGVPLSTDAAVLKAGLQAK
LTDRLNVGLSYVGQYGDHSTDSGLTGNVKVTF
>Mature_431_residues
GQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVASSTILSTEEEAIVVAFRRHTLL
PLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGDKPKRSKFKSYPIGYFHIDIAEVRTEMGRLYLLVAIDRTSKF
AFVQLHEKATRRVAGDFLRALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEHR
LTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEKEPSRFIHNP
HHQIPGQNTYSTFGARFAGTVRVGGVALTPNATLGYRHAFGLTTPTTREAFLAGGNAFDVAGVPLSTDAAVLKAGLQAKL
TDRLNVGLSYVGQYGDHSTDSGLTGNVKVTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48350; Mature: 48219

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHH
STILSTEEEAIVVAFRRHTLLPLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGD
HHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KPKRSKFKSYPIGYFHIDIAEVRTEMGRLYLLVAIDRTSKFAFVQLHEKATRRVAGDFLR
CCHHHHHCCCCCEEEEEEHHHHHHHHCCEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHH
ALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEH
HHHHHCCEEEEEEEECCCCEECCCCCCCCCHHHHHHHHCCCEEEEEECCEEEEECCCHHH
RLTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGL
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPYEFICQQWEKEPSRFIHNPHHQIPGQNTYSTFGARFAGTVRVGGVALTPNATLGYRHA
CHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHCCEEEECCEEECCCCCCCCCEE
FGLTTPTTREAFLAGGNAFDVAGVPLSTDAAVLKAGLQAKLTDRLNVGLSYVGQYGDHST
CCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
DSGLTGNVKVTF
CCCCCCCEEEEC
>Mature Secondary Structure 
GQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVAS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHH
STILSTEEEAIVVAFRRHTLLPLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGD
HHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KPKRSKFKSYPIGYFHIDIAEVRTEMGRLYLLVAIDRTSKFAFVQLHEKATRRVAGDFLR
CCHHHHHCCCCCEEEEEEHHHHHHHHCCEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHH
ALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEH
HHHHHCCEEEEEEEECCCCEECCCCCCCCCHHHHHHHHCCCEEEEEECCEEEEECCCHHH
RLTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGL
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPYEFICQQWEKEPSRFIHNPHHQIPGQNTYSTFGARFAGTVRVGGVALTPNATLGYRHA
CHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHCCEEEECCEEECCCCCCCCCEE
FGLTTPTTREAFLAGGNAFDVAGVPLSTDAAVLKAGLQAKLTDRLNVGLSYVGQYGDHST
CCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
DSGLTGNVKVTF
CCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA