| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is hemK [H]
Identifier: 162147701
GI number: 162147701
Start: 1951531
End: 1952412
Strand: Direct
Name: hemK [H]
Synonym: GDI_1917
Alternate gene names: 162147701
Gene position: 1951531-1952412 (Clockwise)
Preceding gene: 162147699
Following gene: 162147704
Centisome position: 49.48
GC content: 70.07
Gene sequence:
>882_bases ATGAAGAGGTTCGACGCCGCCCCGCCCCACGATCCGGCGGATATCGCATCCCTTCTGGCGTGGGCGGCCGGCCGGCTGGC CGCGGCCGGCCTGGATCATCCGCGACGCGAGGCCCGGCTGCTGATGGCGCACGTCCTGCGCACCGACCTGGCCGGCCTGC TGGCCAGATCGGCGATGGACGCGGCCGAGCACCGATCCTTCGTGGCCCTGGTCGCGCGGCGGGCCGCACATGAACCGATG GCCTATATCACCGGTCGGGCCGGATTCTGGTCGCTGGACCTCGAGACCGCGCCCGCCACGCTGATCCCCCGTGCCGACAG CGAAACCCTGGTCGAGGCCCTGCTGGCCCAGCGGCCCGACCGGGGCGCGGTGCGCACGATCCTGGACCTGGGAACGGGGA CGGGGTGCCTGCTGCTGGCGGCACTGAGCGAGTATCCCGACGCCTGGGGCCTGGGCGTGGATATCGACCCGGATGCCGCG CATCTGGCCGCGCGCAATGCGCGCCGCACCGGGCTGCGGGACCGGTGCGCAATGCTGGCGGCCGACTGGTCCACGGCGAT CGCGGGCCGTTTCGACGTGGTGTTCAGCAACCCGCCCTATATTCCCCGGGCCGATCTGGCGGGATTGATGCCGGATGTCC GTGATCACGAGCCGGCCCGCGCCCTGGATGGCGGGACGGACGGGCTGGATGCCTACCGGCTGCTGACCGGGGCCTTGCCC TCGCTTCTGGCGCATGGCGGCATTGCAATTTTTGAAATCGGCATCGGCCAGGAACGCAGCATGCCGGACCTCGCCCGACA GGCGGGACTTGATATCGTGGGAATCCGTACCGATCTGGGTGGTATTCCCCGTGCTGTACTGATGCAACAGTGCCGGGTCT GA
Upstream 100 bases:
>100_bases CGGGCGCCGCCACGGTGGCGCAAGCCACCAGAATCGCAAGGATTCCCCATGAACGGACCTGATATGCCATGGCGGTACCG TAGGATGGATTGCCGTTGAA
Downstream 100 bases:
>100_bases GCCAAAAAACCATTTGGCAGACCGTGTACAAGGGAATAAATTGGCCGAGGAATGCAGGCAGGGGTATTGACCCTCTTTAA CTGCCGCGTGCCGATCCTGA
Product: HemK protein
Products: NA
Alternate protein names: HemK protein homolog; M.RcoHemKP; tRNA (guanine-N(7)-)-methyltransferase; tRNA(m7G46)-methyltransferase [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKRFDAAPPHDPADIASLLAWAAGRLAAAGLDHPRREARLLMAHVLRTDLAGLLARSAMDAAEHRSFVALVARRAAHEPM AYITGRAGFWSLDLETAPATLIPRADSETLVEALLAQRPDRGAVRTILDLGTGTGCLLLAALSEYPDAWGLGVDIDPDAA HLAARNARRTGLRDRCAMLAADWSTAIAGRFDVVFSNPPYIPRADLAGLMPDVRDHEPARALDGGTDGLDAYRLLTGALP SLLAHGGIAIFEIGIGQERSMPDLARQAGLDIVGIRTDLGGIPRAVLMQQCRV
Sequences:
>Translated_293_residues MKRFDAAPPHDPADIASLLAWAAGRLAAAGLDHPRREARLLMAHVLRTDLAGLLARSAMDAAEHRSFVALVARRAAHEPM AYITGRAGFWSLDLETAPATLIPRADSETLVEALLAQRPDRGAVRTILDLGTGTGCLLLAALSEYPDAWGLGVDIDPDAA HLAARNARRTGLRDRCAMLAADWSTAIAGRFDVVFSNPPYIPRADLAGLMPDVRDHEPARALDGGTDGLDAYRLLTGALP SLLAHGGIAIFEIGIGQERSMPDLARQAGLDIVGIRTDLGGIPRAVLMQQCRV >Mature_293_residues MKRFDAAPPHDPADIASLLAWAAGRLAAAGLDHPRREARLLMAHVLRTDLAGLLARSAMDAAEHRSFVALVARRAAHEPM AYITGRAGFWSLDLETAPATLIPRADSETLVEALLAQRPDRGAVRTILDLGTGTGCLLLAALSEYPDAWGLGVDIDPDAA HLAARNARRTGLRDRCAMLAADWSTAIAGRFDVVFSNPPYIPRADLAGLMPDVRDHEPARALDGGTDGLDAYRLLTGALP SLLAHGGIAIFEIGIGQERSMPDLARQAGLDIVGIRTDLGGIPRAVLMQQCRV
Specific function: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the methyltransferase superfamily. TrmB family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=308, Percent_Identity=29.5454545454545, Blast_Score=106, Evalue=2e-23, Organism=Escherichia coli, GI1787463, Length=260, Percent_Identity=38.0769230769231, Blast_Score=134, Evalue=5e-33, Organism=Escherichia coli, GI87082085, Length=267, Percent_Identity=30.7116104868914, Blast_Score=107, Evalue=1e-24, Organism=Drosophila melanogaster, GI24582226, Length=255, Percent_Identity=26.6666666666667, Blast_Score=100, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 - InterPro: IPR003358 [H]
Pfam domain/function: PF02390 Methyltransf_4; PF05175 MTS [H]
EC number: =2.1.1.33 [H]
Molecular weight: Translated: 31205; Mature: 31205
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFDAAPPHDPADIASLLAWAAGRLAAAGLDHPRREARLLMAHVLRTDLAGLLARSAMD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEHRSFVALVARRAAHEPMAYITGRAGFWSLDLETAPATLIPRADSETLVEALLAQRPD HHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCEEECCCCHHHHHHHHHHCCCC RGAVRTILDLGTGTGCLLLAALSEYPDAWGLGVDIDPDAAHLAARNARRTGLRDRCAMLA CHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH ADWSTAIAGRFDVVFSNPPYIPRADLAGLMPDVRDHEPARALDGGTDGLDAYRLLTGALP HHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHH SLLAHGGIAIFEIGIGQERSMPDLARQAGLDIVGIRTDLGGIPRAVLMQQCRV HHHHHCCEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCC >Mature Secondary Structure MKRFDAAPPHDPADIASLLAWAAGRLAAAGLDHPRREARLLMAHVLRTDLAGLLARSAMD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEHRSFVALVARRAAHEPMAYITGRAGFWSLDLETAPATLIPRADSETLVEALLAQRPD HHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCEEECCCCHHHHHHHHHHCCCC RGAVRTILDLGTGTGCLLLAALSEYPDAWGLGVDIDPDAAHLAARNARRTGLRDRCAMLA CHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH ADWSTAIAGRFDVVFSNPPYIPRADLAGLMPDVRDHEPARALDGGTDGLDAYRLLTGALP HHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHH SLLAHGGIAIFEIGIGQERSMPDLARQAGLDIVGIRTDLGGIPRAVLMQQCRV HHHHHCCEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]