| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is pgl [H]
Identifier: 162147691
GI number: 162147691
Start: 1941505
End: 1942749
Strand: Direct
Name: pgl [H]
Synonym: GDI_1907
Alternate gene names: 162147691
Gene position: 1941505-1942749 (Clockwise)
Preceding gene: 162147690
Following gene: 162147693
Centisome position: 49.22
GC content: 65.38
Gene sequence:
>1245_bases ATGACGATGCCCTTTTCGCGACGCAATCTGCTCCTGGCGCTGGCGGCTTCCGGTACCGCCCCGCTGGCCAGTTCCCTGAC CGGCCCGCGACCGGCGCGCGCCGCGATCCCGGCCATGTCGCGGACGCTGTGCTATATCGGCGGATACAACAAGCACGCGC CTCCGGGCGGGGCCGGGAACGGGCAGGGCATCGCAATTTTCGAAATGAACCGCGTGACGGGCGGGCTCATTCCCGTCAGC ACGTTCATGGACATCGCCAGCCCGTCCTTCATCACGATGTCGGCCGATAGCCGTTTCCTGTACGCGCTCAGCGAAATCGA CGATTTCAACGCCGATCACGACGGCAGCGTCACCGCCTTTTCCGTGGACCGGACGTCCGGCGAACTGAACCGGCTGAACG TCGTCTCGTCCGGCGGTGCCGTGCCGGCGCATCTCAGCGTCCATCGGGCCGGGCATCATGTCCTGGTCGCCAACTATGTC GGCGGCAGTGTCGGCGTCCTGCCCATCCGCCCCGATGGCAGCCTGGGTGAACCCACCGACGTCGTGCACAATACGGGGCC GCATATGCCCGAACGCGCCGAGGACAATCCGCCCGGCAATTTCGCGATCAGCGACCATTCCGGTTCGCACGTGCATATGG TCGCCAGCGATCCGTCGGGCCGCTTCGTCGTGGCCTGCGATGCGGGGCTGGACCGCGTCTATGTCTGGACGCTGGATCTG GCGAGCGGCAAGCTGCGGCCCGCCGCCACGCCGTTCATCAACCTGATCCCGGGCTCCGCCCCCCGCCATTTCGCGTTCAG CAAGGACGGACGGACGATCTATATCCTGTGCGAACAGGATTCGAAGGTCGTCGTCGCATCGTTCGATCCGCGCACCGGCG CGCTGGTCCCACAGCAGAAGGTCAGCACCGTGACCTCCTATTTCCAGGGCAGCACGCTGGCGGCGGAAATCCTGATCTCG CCGAACGGGCGGTATGTCTATGCCTCGAACCGGCTGGGCGATTCGCTGGCGATCTTCCGGGTCGGCCCCGACGGATCGCT GACCCTGATCGACGAGGTCTGGATGCATGCCGACTACGGACGGGCGATGGTATTCGACCCCTCGGGCACGTTCCTGTATT GCGCCAACCAGCGCAGCGATTCGGTGACGTCCTTCCGCGTCAACCCCGAGACCGGCGCGCTGGATTTCAACTGGCACTTC ACCGCGATCGGCAGCCCGACCACGTTTGCCTTTCTCCAGATCTGA
Upstream 100 bases:
>100_bases ACATACCTGGACCCGCTATACCGGCACGATCGGCCAGCGCTGCCAGATGCCGTGATGCGTAATCGCTGCCCGACACGATA AACAACGAGGCACAGCAAGA
Downstream 100 bases:
>100_bases ATCTCGGTCCGCAAACGCGCGCTGGTGGCGATCCGACGCGCGTCTGCTGCGCTCCACTGCGTTCCGCTCCCGCTCACTAG CCCACGTTTCCGAACCGAAA
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MTMPFSRRNLLLALAASGTAPLASSLTGPRPARAAIPAMSRTLCYIGGYNKHAPPGGAGNGQGIAIFEMNRVTGGLIPVS TFMDIASPSFITMSADSRFLYALSEIDDFNADHDGSVTAFSVDRTSGELNRLNVVSSGGAVPAHLSVHRAGHHVLVANYV GGSVGVLPIRPDGSLGEPTDVVHNTGPHMPERAEDNPPGNFAISDHSGSHVHMVASDPSGRFVVACDAGLDRVYVWTLDL ASGKLRPAATPFINLIPGSAPRHFAFSKDGRTIYILCEQDSKVVVASFDPRTGALVPQQKVSTVTSYFQGSTLAAEILIS PNGRYVYASNRLGDSLAIFRVGPDGSLTLIDEVWMHADYGRAMVFDPSGTFLYCANQRSDSVTSFRVNPETGALDFNWHF TAIGSPTTFAFLQI
Sequences:
>Translated_414_residues MTMPFSRRNLLLALAASGTAPLASSLTGPRPARAAIPAMSRTLCYIGGYNKHAPPGGAGNGQGIAIFEMNRVTGGLIPVS TFMDIASPSFITMSADSRFLYALSEIDDFNADHDGSVTAFSVDRTSGELNRLNVVSSGGAVPAHLSVHRAGHHVLVANYV GGSVGVLPIRPDGSLGEPTDVVHNTGPHMPERAEDNPPGNFAISDHSGSHVHMVASDPSGRFVVACDAGLDRVYVWTLDL ASGKLRPAATPFINLIPGSAPRHFAFSKDGRTIYILCEQDSKVVVASFDPRTGALVPQQKVSTVTSYFQGSTLAAEILIS PNGRYVYASNRLGDSLAIFRVGPDGSLTLIDEVWMHADYGRAMVFDPSGTFLYCANQRSDSVTSFRVNPETGALDFNWHF TAIGSPTTFAFLQI >Mature_413_residues TMPFSRRNLLLALAASGTAPLASSLTGPRPARAAIPAMSRTLCYIGGYNKHAPPGGAGNGQGIAIFEMNRVTGGLIPVST FMDIASPSFITMSADSRFLYALSEIDDFNADHDGSVTAFSVDRTSGELNRLNVVSSGGAVPAHLSVHRAGHHVLVANYVG GSVGVLPIRPDGSLGEPTDVVHNTGPHMPERAEDNPPGNFAISDHSGSHVHMVASDPSGRFVVACDAGLDRVYVWTLDLA SGKLRPAATPFINLIPGSAPRHFAFSKDGRTIYILCEQDSKVVVASFDPRTGALVPQQKVSTVTSYFQGSTLAAEILISP NGRYVYASNRLGDSLAIFRVGPDGSLTLIDEVWMHADYGRAMVFDPSGTFLYCANQRSDSVTSFRVNPETGALDFNWHFT AIGSPTTFAFLQI
Specific function: Unknown
COG id: COG2706
COG function: function code G; 3-carboxymuconate cyclase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cycloisomerase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1786983, Length=334, Percent_Identity=23.3532934131737, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011048 - InterPro: IPR019405 - InterPro: IPR015943 [H]
Pfam domain/function: PF10282 DUF2394 [H]
EC number: NA
Molecular weight: Translated: 44000; Mature: 43869
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPFSRRNLLLALAASGTAPLASSLTGPRPARAAIPAMSRTLCYIGGYNKHAPPGGAGN CCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCHHHCCHHHCEEEEECCCCCCCCCCCCCC GQGIAIFEMNRVTGGLIPVSTFMDIASPSFITMSADSRFLYALSEIDDFNADHDGSVTAF CCEEEEEEECCCCCCEEEHHHHHHHCCCCEEEEECCCEEEEEEEHHCCCCCCCCCCEEEE SVDRTSGELNRLNVVSSGGAVPAHLSVHRAGHHVLVANYVGGSVGVLPIRPDGSLGEPTD EEECCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCHH VVHNTGPHMPERAEDNPPGNFAISDHSGSHVHMVASDPSGRFVVACDAGLDRVYVWTLDL HHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEEEE ASGKLRPAATPFINLIPGSAPRHFAFSKDGRTIYILCEQDSKVVVASFDPRTGALVPQQK CCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCHHH VSTVTSYFQGSTLAAEILISPNGRYVYASNRLGDSLAIFRVGPDGSLTLIDEVWMHADYG HHHHHHHHCCCEEEEEEEECCCCCEEEECCCCCCEEEEEEECCCCCEEEEEHHHEECCCC RAMVFDPSGTFLYCANQRSDSVTSFRVNPETGALDFNWHFTAIGSPTTFAFLQI CEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEC >Mature Secondary Structure TMPFSRRNLLLALAASGTAPLASSLTGPRPARAAIPAMSRTLCYIGGYNKHAPPGGAGN CCCCCCCCEEEEEECCCCCCHHHCCCCCCCCHHHCCHHHCEEEEECCCCCCCCCCCCCC GQGIAIFEMNRVTGGLIPVSTFMDIASPSFITMSADSRFLYALSEIDDFNADHDGSVTAF CCEEEEEEECCCCCCEEEHHHHHHHCCCCEEEEECCCEEEEEEEHHCCCCCCCCCCEEEE SVDRTSGELNRLNVVSSGGAVPAHLSVHRAGHHVLVANYVGGSVGVLPIRPDGSLGEPTD EEECCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCHH VVHNTGPHMPERAEDNPPGNFAISDHSGSHVHMVASDPSGRFVVACDAGLDRVYVWTLDL HHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEEEE ASGKLRPAATPFINLIPGSAPRHFAFSKDGRTIYILCEQDSKVVVASFDPRTGALVPQQK CCCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCHHH VSTVTSYFQGSTLAAEILISPNGRYVYASNRLGDSLAIFRVGPDGSLTLIDEVWMHADYG HHHHHHHHCCCEEEEEEEECCCCCEEEECCCCCCEEEEEEECCCCCEEEEEHHHEECCCC RAMVFDPSGTFLYCANQRSDSVTSFRVNPETGALDFNWHFTAIGSPTTFAFLQI CEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]