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The map label for this gene is bioC [C]

Identifier: 162147686

GI number: 162147686

Start: 1938263

End: 1939132

Strand: Reverse

Name: bioC [C]

Synonym: GDI_1902

Alternate gene names: 162147686

Gene position: 1939132-1938263 (Counterclockwise)

Preceding gene: 162147692

Following gene: 162147681

Centisome position: 49.16

GC content: 70.69

Gene sequence:

>870_bases
ATGCCGTCCATGAATGATCCCCTGATTTTCGACCGGCGCGCGGTGCGTCGGCACCGCGATCGCGCCGCCCCGATGGTGCA
TGAGATCGCCCCCGTCCTGGAGGAGGTCGCGGACCGGCTGCTGGACCGGCTGGACGACACGACCTATCGCTTCACCGCCG
CGCTGGATATCGGGGGGCGCGGCGTGGTGGCCCCGCGCCTGCGCGCCCGGGGCATCGGCAGCGTCGTCTCCTGCGATCTG
TCGCCGCGCATGGCGCGGATCAACGGCGGAACGGTCCTGTGCGCGGACGAGGAATGGCTGCCCTTCGGTCCGGGTTCGTT
CGACCTCGTCGTCGCCAACCTGTCGCTGCATTGGGTCAACGACCTGCCCGGCGCGCTGGCGCAGATCCGTCACGCGCTGA
AGCCGGATGGACTGTTCCTGGCCAGCCTGCCGGTCCTGCCCAGCCTGTCCGACCTGCGCCGCGCGCTGACCGAGGCGGAA
GCGGCCCTGACAGGCGGGGCGACGCCGCGTGTCTCGCCCTTTCCGGACCTGCGTGACTGCGCGGCGCTGCTGCAACGCGC
GGGGTTCGCCCTGCCGGTGGCCGACGCCGAAACGGTGACGCTGGCCTATCGCTCGCCCTTCCGCCTGCTGCAGGACCTGC
GCGCGGCGGGCGAGACCAACGCGCTGGTGCTACGCAGCCGGCAATTCACCCAGCCGGACCTGTTTCCCGCCGCCTTCGCC
GCCCTGGCATCCGCCGCCGGAGACGATCCGCTGTCCGTGCCGCTGCGCCTGGCCATCATGACTGGCTGGTCGCCCGATGC
CAGCCAGCCCCAGCCGCTACGCCCCGGCCAGTTCACCGTGTCGTTGGAAGATGCGATCAAGAAAATATAA

Upstream 100 bases:

>100_bases
AGGCGGCGCGCCATGCCCCCCGGTCCGGTCATCGTTGTCGTGCGTATCGCCCCATCCATCACGCAAAGGTGCCATTGGCA
TCCTCCATCCGGAAGAGCAC

Downstream 100 bases:

>100_bases
TAACAGACTGATTATACAATATTGTCTGTCTATTTTACCCGCCGGTGACGCTCATGTGCCTGCGGATGGCGGCGGGGTCG
TCTGCGTGGCGCCCGATCAG

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MPSMNDPLIFDRRAVRRHRDRAAPMVHEIAPVLEEVADRLLDRLDDTTYRFTAALDIGGRGVVAPRLRARGIGSVVSCDL
SPRMARINGGTVLCADEEWLPFGPGSFDLVVANLSLHWVNDLPGALAQIRHALKPDGLFLASLPVLPSLSDLRRALTEAE
AALTGGATPRVSPFPDLRDCAALLQRAGFALPVADAETVTLAYRSPFRLLQDLRAAGETNALVLRSRQFTQPDLFPAAFA
ALASAAGDDPLSVPLRLAIMTGWSPDASQPQPLRPGQFTVSLEDAIKKI

Sequences:

>Translated_289_residues
MPSMNDPLIFDRRAVRRHRDRAAPMVHEIAPVLEEVADRLLDRLDDTTYRFTAALDIGGRGVVAPRLRARGIGSVVSCDL
SPRMARINGGTVLCADEEWLPFGPGSFDLVVANLSLHWVNDLPGALAQIRHALKPDGLFLASLPVLPSLSDLRRALTEAE
AALTGGATPRVSPFPDLRDCAALLQRAGFALPVADAETVTLAYRSPFRLLQDLRAAGETNALVLRSRQFTQPDLFPAAFA
ALASAAGDDPLSVPLRLAIMTGWSPDASQPQPLRPGQFTVSLEDAIKKI
>Mature_288_residues
PSMNDPLIFDRRAVRRHRDRAAPMVHEIAPVLEEVADRLLDRLDDTTYRFTAALDIGGRGVVAPRLRARGIGSVVSCDLS
PRMARINGGTVLCADEEWLPFGPGSFDLVVANLSLHWVNDLPGALAQIRHALKPDGLFLASLPVLPSLSDLRRALTEAEA
ALTGGATPRVSPFPDLRDCAALLQRAGFALPVADAETVTLAYRSPFRLLQDLRAAGETNALVLRSRQFTQPDLFPAAFAA
LASAAGDDPLSVPLRLAIMTGWSPDASQPQPLRPGQFTVSLEDAIKKI

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40018642, Length=284, Percent_Identity=37.6760563380282, Blast_Score=170, Evalue=1e-42,
Organism=Homo sapiens, GI86792933, Length=285, Percent_Identity=32.9824561403509, Blast_Score=128, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI17535003, Length=299, Percent_Identity=30.7692307692308, Blast_Score=131, Evalue=3e-31,
Organism=Drosophila melanogaster, GI19922210, Length=287, Percent_Identity=37.2822299651568, Blast_Score=180, Evalue=8e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 31180; Mature: 31049

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSMNDPLIFDRRAVRRHRDRAAPMVHEIAPVLEEVADRLLDRLDDTTYRFTAALDIGGR
CCCCCCCEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
GVVAPRLRARGIGSVVSCDLSPRMARINGGTVLCADEEWLPFGPGSFDLVVANLSLHWVN
CEECCCHHHCCCCCEEEECCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEEEEEEEEHH
DLPGALAQIRHALKPDGLFLASLPVLPSLSDLRRALTEAEAALTGGATPRVSPFPDLRDC
CCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
AALLQRAGFALPVADAETVTLAYRSPFRLLQDLRAAGETNALVLRSRQFTQPDLFPAAFA
HHHHHHCCCEEEECCCCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH
ALASAAGDDPLSVPLRLAIMTGWSPDASQPQPLRPGQFTVSLEDAIKKI
HHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHCC
>Mature Secondary Structure 
PSMNDPLIFDRRAVRRHRDRAAPMVHEIAPVLEEVADRLLDRLDDTTYRFTAALDIGGR
CCCCCCEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
GVVAPRLRARGIGSVVSCDLSPRMARINGGTVLCADEEWLPFGPGSFDLVVANLSLHWVN
CEECCCHHHCCCCCEEEECCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEEEEEEEEHH
DLPGALAQIRHALKPDGLFLASLPVLPSLSDLRRALTEAEAALTGGATPRVSPFPDLRDC
CCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
AALLQRAGFALPVADAETVTLAYRSPFRLLQDLRAAGETNALVLRSRQFTQPDLFPAAFA
HHHHHHCCCEEEECCCCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH
ALASAAGDDPLSVPLRLAIMTGWSPDASQPQPLRPGQFTVSLEDAIKKI
HHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]