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The map label for this gene is ybeY [C]

Identifier: 162147625

GI number: 162147625

Start: 1874989

End: 1875447

Strand: Reverse

Name: ybeY [C]

Synonym: GDI_1841

Alternate gene names: 162147625

Gene position: 1875447-1874989 (Counterclockwise)

Preceding gene: 162147626

Following gene: 162147624

Centisome position: 47.55

GC content: 72.55

Gene sequence:

>459_bases
GTGACCGACGCGCGCTGGCATGGCGCCGTGCCGGGCATTGCGGCCCTGGTCCGGCGCACCGCGCGCGCGGCCTGGGGCGG
TGACGCACCGGGGCCCGTCACGATCATGCTGGACAATGACCGCGCGATCCGCCGGTTGAACGCCCGGCATCGCGACCGGA
ACAAGCCGACCAACGTCCTGACCTTCGACTATCCCGGCGGCCTGCCGGGGGGCGACATCATGATCGCGCTGGAAACCGTG
CGGCGCGAGGCCCAGGCGGCCGGCCGGCCCATCCGCCACCACCTGATGCACCTGGTGGTGCACGGCATCCTGCACCTGCG
CGGCCACGACCATCACCAGGCCGGCGAGGCCCGGCGGATGGAAATGGAGGAAGCCCGGATCCTGGGCCGCCTGTCGGTGC
CCAATCCCTGGAAATACCGCCCCGGCGCACCGTCGGGGCTGATGGGGGACGGGCAGTGA

Upstream 100 bases:

>100_bases
GATAGAGCCGACGGCCGGACGCGCCGTCGGCCTTCCCCCTGTTCCGCTCCACGAGTGGGACGTCCCGGCCGGGGACGGCG
GCGATGACTGCGATGTCGTC

Downstream 100 bases:

>100_bases
ACCGCCCCCTGCCCGTTTCCGCGACGTCGGACGCCGCGCCGCATCGCACCGATGCCCCCAAGGCGGAGACGGCCCGCCCC
CCCGATGAGGTCCCCCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTDARWHGAVPGIAALVRRTARAAWGGDAPGPVTIMLDNDRAIRRLNARHRDRNKPTNVLTFDYPGGLPGGDIMIALETV
RREAQAAGRPIRHHLMHLVVHGILHLRGHDHHQAGEARRMEMEEARILGRLSVPNPWKYRPGAPSGLMGDGQ

Sequences:

>Translated_152_residues
MTDARWHGAVPGIAALVRRTARAAWGGDAPGPVTIMLDNDRAIRRLNARHRDRNKPTNVLTFDYPGGLPGGDIMIALETV
RREAQAAGRPIRHHLMHLVVHGILHLRGHDHHQAGEARRMEMEEARILGRLSVPNPWKYRPGAPSGLMGDGQ
>Mature_151_residues
TDARWHGAVPGIAALVRRTARAAWGGDAPGPVTIMLDNDRAIRRLNARHRDRNKPTNVLTFDYPGGLPGGDIMIALETVR
REAQAAGRPIRHHLMHLVVHGILHLRGHDHHQAGEARRMEMEEARILGRLSVPNPWKYRPGAPSGLMGDGQ

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity [H]

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family [H]

Homologues:

Organism=Escherichia coli, GI1786880, Length=110, Percent_Identity=40, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036 [H]

Pfam domain/function: PF02130 UPF0054 [H]

EC number: NA

Molecular weight: Translated: 16811; Mature: 16679

Theoretical pI: Translated: 11.62; Mature: 11.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDARWHGAVPGIAALVRRTARAAWGGDAPGPVTIMLDNDRAIRRLNARHRDRNKPTNVL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEE
TFDYPGGLPGGDIMIALETVRREAQAAGRPIRHHLMHLVVHGILHLRGHDHHQAGEARRM
EECCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
EMEEARILGRLSVPNPWKYRPGAPSGLMGDGQ
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDARWHGAVPGIAALVRRTARAAWGGDAPGPVTIMLDNDRAIRRLNARHRDRNKPTNVL
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEE
TFDYPGGLPGGDIMIALETVRREAQAAGRPIRHHLMHLVVHGILHLRGHDHHQAGEARRM
EECCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
EMEEARILGRLSVPNPWKYRPGAPSGLMGDGQ
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA