| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is mtrA [H]
Identifier: 162147599
GI number: 162147599
Start: 1848883
End: 1849650
Strand: Direct
Name: mtrA [H]
Synonym: GDI_1815
Alternate gene names: 162147599
Gene position: 1848883-1849650 (Clockwise)
Preceding gene: 162147597
Following gene: 162147602
Centisome position: 46.88
GC content: 64.19
Gene sequence:
>768_bases ATGGATACCGGCCCCACGCAGATGGGGAACGGTCAAAATAAAGAGGGTTCGATGGCAGGTGCGCGTCCCATTCTGATAGT GGATGACGATCAGACGTTACGTCATATGCTCGTCGAACAATTGCAGTTGGAAGGAGAGTTCCAGGCGATCGAAGCCGACT CGGTCGCCGATGCCTGGGACAAGCTGAATGCCCCGGGGGCGCGATTCGACGCCATCATCCTGGACGTGACGCTGCCCGAC GGGGACGGACGGGATTTCTGCGCCGAGCTGCGGCGCCAGGGCAAGCGGATCCCCATCATCATCCTGACGGGTTCGGACGA TGAAACGGACGTGGTACGCGGGCTGGATGCCGGGGCCAACGACTATGTCGCCAAGCCCTTCCGCATCGCCGAGCTGCTGG CCCGGCTGCGCGCCCAGATGCGCATCTTCGAAAACAGCGAGGACGCGGTCTTCTCGATCGGGCCGTATGTGTTCCGTCCG TCGGCCAAGCTGCTGCAGGAACCCACGCGCAACCGCCGCATCCGGCTGACCGAGAAAGAGGCGGCGATCCTGAAATTCCT CTATCGCGCCGGGACGCGGCCGGTGCCGCGCCAGGTCCTGCTGAACGAGGTCTGGGGCTATAACGCCGCCGTCACCACCC ACACGCTGGAAACCCACATCTACCGCCTGCGGCAGAAGATCGAGCCCGATCCGACCAACGCGTCGCTGCTGGTGACCGAG GGCGGCGGCTATCGCCTGGACCCCGAGGGTGGAATGCGCATCGCCTGA
Upstream 100 bases:
>100_bases CGGTCCTAGAGTGGACGATACCGGCGTAGTCGTGAAAGAGGTACCGTGCGGGGTGGCTGGCTCCGGACGCTGCCGTTTCC GCGCCAGGATGATATAGGTT
Downstream 100 bases:
>100_bases GTATTGGTCCGGAAACGCGCGCTGGTGGTGATCCGGCGCGCGTTTCCGGGATGCTCCGGTGCGCAGAAACACATGGCGGA GGCGGGCCCTTTGGGACGCT
Product: DNA-binding response regulator mtrA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MDTGPTQMGNGQNKEGSMAGARPILIVDDDQTLRHMLVEQLQLEGEFQAIEADSVADAWDKLNAPGARFDAIILDVTLPD GDGRDFCAELRRQGKRIPIIILTGSDDETDVVRGLDAGANDYVAKPFRIAELLARLRAQMRIFENSEDAVFSIGPYVFRP SAKLLQEPTRNRRIRLTEKEAAILKFLYRAGTRPVPRQVLLNEVWGYNAAVTTHTLETHIYRLRQKIEPDPTNASLLVTE GGGYRLDPEGGMRIA
Sequences:
>Translated_255_residues MDTGPTQMGNGQNKEGSMAGARPILIVDDDQTLRHMLVEQLQLEGEFQAIEADSVADAWDKLNAPGARFDAIILDVTLPD GDGRDFCAELRRQGKRIPIIILTGSDDETDVVRGLDAGANDYVAKPFRIAELLARLRAQMRIFENSEDAVFSIGPYVFRP SAKLLQEPTRNRRIRLTEKEAAILKFLYRAGTRPVPRQVLLNEVWGYNAAVTTHTLETHIYRLRQKIEPDPTNASLLVTE GGGYRLDPEGGMRIA >Mature_255_residues MDTGPTQMGNGQNKEGSMAGARPILIVDDDQTLRHMLVEQLQLEGEFQAIEADSVADAWDKLNAPGARFDAIILDVTLPD GDGRDFCAELRRQGKRIPIIILTGSDDETDVVRGLDAGANDYVAKPFRIAELLARLRAQMRIFENSEDAVFSIGPYVFRP SAKLLQEPTRNRRIRLTEKEAAILKFLYRAGTRPVPRQVLLNEVWGYNAAVTTHTLETHIYRLRQKIEPDPTNASLLVTE GGGYRLDPEGGMRIA
Specific function: Member of the two-component regulatory system sphR/sphS. Response regulator. Involved in inducible production of alkaline phosphatase in response to phosphate limitation as it is directly involved in the regulation of phoA transcription in response to pho
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=234, Percent_Identity=36.7521367521368, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=35.8407079646018, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=33.9285714285714, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1789809, Length=239, Percent_Identity=34.3096234309623, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=36.7713004484305, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1789402, Length=167, Percent_Identity=37.125748502994, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1786784, Length=233, Percent_Identity=33.9055793991416, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=32.1266968325792, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1790860, Length=229, Percent_Identity=33.1877729257642, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=30.5309734513274, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI2367329, Length=216, Percent_Identity=34.2592592592593, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=29.9145299145299, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1787229, Length=189, Percent_Identity=30.1587301587302, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 28400; Mature: 28400
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTGPTQMGNGQNKEGSMAGARPILIVDDDQTLRHMLVEQLQLEGEFQAIEADSVADAWD CCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHH KLNAPGARFDAIILDVTLPDGDGRDFCAELRRQGKRIPIIILTGSDDETDVVRGLDAGAN HCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCC DYVAKPFRIAELLARLRAQMRIFENSEDAVFSIGPYVFRPSAKLLQEPTRNRRIRLTEKE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCCHHHHHCCCCCCEEEEEHHH AAILKFLYRAGTRPVPRQVLLNEVWGYNAAVTTHTLETHIYRLRQKIEPDPTNASLLVTE HHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEC GGGYRLDPEGGMRIA CCCEEECCCCCCCCC >Mature Secondary Structure MDTGPTQMGNGQNKEGSMAGARPILIVDDDQTLRHMLVEQLQLEGEFQAIEADSVADAWD CCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHH KLNAPGARFDAIILDVTLPDGDGRDFCAELRRQGKRIPIIILTGSDDETDVVRGLDAGAN HCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCC DYVAKPFRIAELLARLRAQMRIFENSEDAVFSIGPYVFRPSAKLLQEPTRNRRIRLTEKE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCCHHHHHCCCCCCEEEEEHHH AAILKFLYRAGTRPVPRQVLLNEVWGYNAAVTTHTLETHIYRLRQKIEPDPTNASLLVTE HHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEC GGGYRLDPEGGMRIA CCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8497200; 8157591 [H]