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The map label for this gene is ycgB [H]

Identifier: 162147589

GI number: 162147589

Start: 1838073

End: 1839644

Strand: Direct

Name: ycgB [H]

Synonym: GDI_1805

Alternate gene names: 162147589

Gene position: 1838073-1839644 (Clockwise)

Preceding gene: 162147588

Following gene: 162147590

Centisome position: 46.6

GC content: 62.66

Gene sequence:

>1572_bases
ATGATGAACCAGATCACGCCCAAAGGCGGTGGGGATGGGGGCGGCGCCCGGCCGGGCGGCCTGCTCTATTCCGGCAATGA
CTGGAACTTCCAGATCCTCCGCGATTGCTACGATGCGATCGCCGAGATCGCGGACAAGGAACTGGGGCTGGAACTCTATG
CCAACCGGATCGAGATCATCACGTCCGAACAGATGCTGGACGTCTATACCTCGCACGGGATGCCGCTGGGGTACAAGCAC
TGGTCGTTCGGCAAGCGCTTCATCGGGCATGAAAACGCCTATCGCCGCGGACTGATGGGCCTGGCCTACGAGGTCGTCAT
CAATTCCGATCCCTGCATCAACTATCTGATGGAGGAAAATTCGGCGACGATGCAGGCGCTGGTCATCGCCCACGCCGCGT
TCGGCCATAACCATTTTTTCCGCAACAACCGGCTGTTCCGCGAATGGACGGACCCGTCGGAGATTTTGGACTACCTGGAA
TTCGCCCGCGGCTTCATCGCGCGGTGCGAGGAACGGCACGGCGTGCGCGCGGTGGAGCGAATCCTGGATGCCGCCCACGC
CCTGCAGAACCAGGGCGTCCACCGTCATTCGGGCGCCCGCAAGCTGGATCTGAAGGCCGAGCAGCAGCGCGCGCGCGAAC
GGCGCGCCTATGAAGACAGCATGTTCAACGATCTGTGGCGCACCCTGCCCACCGAACCGGCCGGCGAGGAAGGGCAGGCC
GAGGGCGCCCTGGCACGGCGCCTGCTGGGCCTGCCCGAGGAAAACCTGCTCTATTTCCTGGAAAAGAACGCCCCCCGCCT
GGCGTCGTGGGAGCGCGAGATCATCCGGATCGTGCGGATGGTCGCGCAATATTTCTACCCGCAGCCCCAGGTGAAGATGA
TGAACGAGGGCTGCGCCACCTGGGTGCATTCCTACATCATGCGCCGGCTGCATGAACTGGGCCGGATCGACGACGCGGCG
TATCTGGAAGTCATCCATTCCACATCGAATGTGATCAGCCAGCCCGGTTTCGATGCCGGCGGCGGACCGTCCTTCAATCC
CTACGCGCTGGGCTATGCGATGATGACCGACATCGCCCGGATCTGCGAGACACCCACCGAGGAGGACCGGACCTGGTTCC
CCGATATCGCCGGCAACGGCGACCCGATCGGCACCCTGCGGCATGCCTGGGCGGAATACCGGGATGAAAGCTTCATCCAG
CAATTCCTTTCCCCCAAGGTGATCCGGGATTTCCGCATGTTCCGCCTGCGCGACGACACCAGCCAGCCCTACCTGCTGGT
CGACGCGATCCATGACGAGGCCGGATATCGCGACATCCGCCGCAGCGTGGCGCTGACCTACGATCCCGGGACGTTCTATA
CCGAAATCGAGATCGTGGATGTGGACCTGCTGGGCGACCGCACCCTGGTGCTGGAACATCGCAGCCGCACCGGCCAGATG
CTCCAGCCCGGCGATGCGCGGCAGACGCTCGATTATCTTGCATTATTATGGGGTTATGGCGTCATCCTGAAGGAAATCGA
CAGCCAGACCGGAACCGTCGTCACCACCCATTCGGCCAAACCATCCGCATAA

Upstream 100 bases:

>100_bases
ATGAAAACGACCACCTGGCGATCCGGCAGGTCGGCGACCGCAAGGAAATCTTCCCCGTTTTCCGCGAACTGTTTTCCCGA
CAGCACGACACGGCGGAGGC

Downstream 100 bases:

>100_bases
CGCCGGGCACGTCCCGGCGGATCGGGAAAACGGGCTGGCCTTCGCCTGCGAAAATTTGTATCGAATGGAGATCGAAACGG
GAGGCGATCGGTCGTGCGCG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MMNQITPKGGGDGGGARPGGLLYSGNDWNFQILRDCYDAIAEIADKELGLELYANRIEIITSEQMLDVYTSHGMPLGYKH
WSFGKRFIGHENAYRRGLMGLAYEVVINSDPCINYLMEENSATMQALVIAHAAFGHNHFFRNNRLFREWTDPSEILDYLE
FARGFIARCEERHGVRAVERILDAAHALQNQGVHRHSGARKLDLKAEQQRARERRAYEDSMFNDLWRTLPTEPAGEEGQA
EGALARRLLGLPEENLLYFLEKNAPRLASWEREIIRIVRMVAQYFYPQPQVKMMNEGCATWVHSYIMRRLHELGRIDDAA
YLEVIHSTSNVISQPGFDAGGGPSFNPYALGYAMMTDIARICETPTEEDRTWFPDIAGNGDPIGTLRHAWAEYRDESFIQ
QFLSPKVIRDFRMFRLRDDTSQPYLLVDAIHDEAGYRDIRRSVALTYDPGTFYTEIEIVDVDLLGDRTLVLEHRSRTGQM
LQPGDARQTLDYLALLWGYGVILKEIDSQTGTVVTTHSAKPSA

Sequences:

>Translated_523_residues
MMNQITPKGGGDGGGARPGGLLYSGNDWNFQILRDCYDAIAEIADKELGLELYANRIEIITSEQMLDVYTSHGMPLGYKH
WSFGKRFIGHENAYRRGLMGLAYEVVINSDPCINYLMEENSATMQALVIAHAAFGHNHFFRNNRLFREWTDPSEILDYLE
FARGFIARCEERHGVRAVERILDAAHALQNQGVHRHSGARKLDLKAEQQRARERRAYEDSMFNDLWRTLPTEPAGEEGQA
EGALARRLLGLPEENLLYFLEKNAPRLASWEREIIRIVRMVAQYFYPQPQVKMMNEGCATWVHSYIMRRLHELGRIDDAA
YLEVIHSTSNVISQPGFDAGGGPSFNPYALGYAMMTDIARICETPTEEDRTWFPDIAGNGDPIGTLRHAWAEYRDESFIQ
QFLSPKVIRDFRMFRLRDDTSQPYLLVDAIHDEAGYRDIRRSVALTYDPGTFYTEIEIVDVDLLGDRTLVLEHRSRTGQM
LQPGDARQTLDYLALLWGYGVILKEIDSQTGTVVTTHSAKPSA
>Mature_523_residues
MMNQITPKGGGDGGGARPGGLLYSGNDWNFQILRDCYDAIAEIADKELGLELYANRIEIITSEQMLDVYTSHGMPLGYKH
WSFGKRFIGHENAYRRGLMGLAYEVVINSDPCINYLMEENSATMQALVIAHAAFGHNHFFRNNRLFREWTDPSEILDYLE
FARGFIARCEERHGVRAVERILDAAHALQNQGVHRHSGARKLDLKAEQQRARERRAYEDSMFNDLWRTLPTEPAGEEGQA
EGALARRLLGLPEENLLYFLEKNAPRLASWEREIIRIVRMVAQYFYPQPQVKMMNEGCATWVHSYIMRRLHELGRIDDAA
YLEVIHSTSNVISQPGFDAGGGPSFNPYALGYAMMTDIARICETPTEEDRTWFPDIAGNGDPIGTLRHAWAEYRDESFIQ
QFLSPKVIRDFRMFRLRDDTSQPYLLVDAIHDEAGYRDIRRSVALTYDPGTFYTEIEIVDVDLLGDRTLVLEHRSRTGQM
LQPGDARQTLDYLALLWGYGVILKEIDSQTGTVVTTHSAKPSA

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=500, Percent_Identity=50.4, Blast_Score=498, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59597; Mature: 59597

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNQITPKGGGDGGGARPGGLLYSGNDWNFQILRDCYDAIAEIADKELGLELYANRIEII
CCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCHHHEE
TSEQMLDVYTSHGMPLGYKHWSFGKRFIGHENAYRRGLMGLAYEVVINSDPCINYLMEEN
EHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHEEEEEECCCHHHHHHHHCC
SATMQALVIAHAAFGHNHFFRNNRLFREWTDPSEILDYLEFARGFIARCEERHGVRAVER
CHHHHHHHHHHHHHCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ILDAAHALQNQGVHRHSGARKLDLKAEQQRARERRAYEDSMFNDLWRTLPTEPAGEEGQA
HHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
EGALARRLLGLPEENLLYFLEKNAPRLASWEREIIRIVRMVAQYFYPQPQVKMMNEGCAT
HHHHHHHHHCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
WVHSYIMRRLHELGRIDDAAYLEVIHSTSNVISQPGFDAGGGPSFNPYALGYAMMTDIAR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ICETPTEEDRTWFPDIAGNGDPIGTLRHAWAEYRDESFIQQFLSPKVIRDFRMFRLRDDT
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEECCC
SQPYLLVDAIHDEAGYRDIRRSVALTYDPGTFYTEIEIVDVDLLGDRTLVLEHRSRTGQM
CCCEEEEEEHHCCCCHHHHHHCEEEEECCCCEEEEEEEEEEEEECCCEEEEECCCCCCCC
LQPGDARQTLDYLALLWGYGVILKEIDSQTGTVVTTHSAKPSA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MMNQITPKGGGDGGGARPGGLLYSGNDWNFQILRDCYDAIAEIADKELGLELYANRIEII
CCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCHHHEE
TSEQMLDVYTSHGMPLGYKHWSFGKRFIGHENAYRRGLMGLAYEVVINSDPCINYLMEEN
EHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHEEEEEECCCHHHHHHHHCC
SATMQALVIAHAAFGHNHFFRNNRLFREWTDPSEILDYLEFARGFIARCEERHGVRAVER
CHHHHHHHHHHHHHCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ILDAAHALQNQGVHRHSGARKLDLKAEQQRARERRAYEDSMFNDLWRTLPTEPAGEEGQA
HHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
EGALARRLLGLPEENLLYFLEKNAPRLASWEREIIRIVRMVAQYFYPQPQVKMMNEGCAT
HHHHHHHHHCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
WVHSYIMRRLHELGRIDDAAYLEVIHSTSNVISQPGFDAGGGPSFNPYALGYAMMTDIAR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ICETPTEEDRTWFPDIAGNGDPIGTLRHAWAEYRDESFIQQFLSPKVIRDFRMFRLRDDT
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEECCC
SQPYLLVDAIHDEAGYRDIRRSVALTYDPGTFYTEIEIVDVDLLGDRTLVLEHRSRTGQM
CCCEEEEEEHHCCCCHHHHHHCEEEEECCCCEEEEEEEEEEEEECCCEEEEECCCCCCCC
LQPGDARQTLDYLALLWGYGVILKEIDSQTGTVVTTHSAKPSA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]