| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yeaH [C]
Identifier: 162147588
GI number: 162147588
Start: 1836769
End: 1838076
Strand: Direct
Name: yeaH [C]
Synonym: GDI_1804
Alternate gene names: 162147588
Gene position: 1836769-1838076 (Clockwise)
Preceding gene: 162147587
Following gene: 162147589
Centisome position: 46.57
GC content: 66.67
Gene sequence:
>1308_bases GTGGATATTATCGACAGACGTCCCAATCCCCATGGGAAGAATATCGAAAATCGGCGGCGCGTGCTGCAGCGCGCCCGTGC CGCCGTGCAGAAGGCCGTGCGCGATTCGGTCGCGCGCGGCAAGATCAGGGAGGTCGGGCAGGGAAATGCGGTGTCGATCC CGTCGGACGCGCTGCATGAGCCCACCTTCCACCGCGTCTTTTCCGAGGGTGTGCGCGAGATCGTGCTCACCGGTAACCGC GAGTTCTCGCGCGGGGACCGGCTGCAACGCCCGCCGGGCGGCGTAGGGCAGGGCGGTGGCGGCGAAGGGCAGGGCGGCGA AAAGGGGGGCGGCGAGGATTCCTTCCGCTTCGTGCTGAGCCGCGACGAATTCCTGGACCTGTTCTTCGACGACCTGGAAC TGCCGGACCTGGTCAAGCGCGAGATCGCGGCCACCGAGACCAGCAAGCCCACCCGCAGCGGGCTGAGCAACGAGGGCGCG CCGTCGCACCTGGATCTGGGGCGGACGATGCGGCGGTCGATCGCCCGGCGCATCGGGCTGGGCCGTCCCAAGCCCGACGA CCTGCGCGAGATCGAGGCCCGGATCGCCGAACTGGAGGACCGCCGGCCCCTGGGGACCGAGGATCTGGACGAACTGGAAT CCCTGTGCGAACGCCGGGGCACGCTGCGCCAGCGCCTGGCACGGATTCCGTGGGTCGATCCGGTCGATCTGCGGTTCCGC CGCTATACCGTCGTGCCGCAGCCGGCGACGCGGGCCGTGATGTTCTGCATCATGGACGTCTCGGGCTCGATGACCGAGCG GATGAAGGACCTGGCGAAGCAGTTCTTCCTGCTGCTGCACGTCTTTCTGGAGCGGCGGTACAAGAAGGTCGAAATCGTCT TCATCCGCCACGCCGAAAGCGCCGAGGAGGTGGACGAGGAAACCTTCTTCCACGATCCGCGCACCGGCGGGACCATCGTG TCCTCGGCGCTGGAACTGATGTCCAGCATCCAGCGCGAGCGCTTTCCGTCGGGAAGCTGGAACATCTATGTCGCGCAGGC GTCGGACGGCGACAATGCGTCGTCCGACACCACCCGGACCGCCAGCCTGCTGCGGGACGAGATCCTGCCGGCGGTCCAGT ACTATGCCTATATCGAAATCACGGGCTCGGGGGCGGTTATCCGTGGCGAGACCGACCTGTGGCGCAGCTACCGGACGATC GCGGATGAAAACGACCACCTGGCGATCCGGCAGGTCGGCGACCGCAAGGAAATCTTCCCCGTTTTCCGCGAACTGTTTTC CCGACAGCACGACACGGCGGAGGCATGA
Upstream 100 bases:
>100_bases CGGATGGTCTCGCGCGGATATACGGAACGACAGGTCCGCAGGCTCGTTGAGTGGTACATGCGGGTCAAGCAGTCTGCGTG AACGGGAATGGTGTCGCCCA
Downstream 100 bases:
>100_bases TGAACCAGATCACGCCCAAAGGCGGTGGGGATGGGGGCGGCGCCCGGCCGGGCGGCCTGCTCTATTCCGGCAATGACTGG AACTTCCAGATCCTCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MDIIDRRPNPHGKNIENRRRVLQRARAAVQKAVRDSVARGKIREVGQGNAVSIPSDALHEPTFHRVFSEGVREIVLTGNR EFSRGDRLQRPPGGVGQGGGGEGQGGEKGGGEDSFRFVLSRDEFLDLFFDDLELPDLVKREIAATETSKPTRSGLSNEGA PSHLDLGRTMRRSIARRIGLGRPKPDDLREIEARIAELEDRRPLGTEDLDELESLCERRGTLRQRLARIPWVDPVDLRFR RYTVVPQPATRAVMFCIMDVSGSMTERMKDLAKQFFLLLHVFLERRYKKVEIVFIRHAESAEEVDEETFFHDPRTGGTIV SSALELMSSIQRERFPSGSWNIYVAQASDGDNASSDTTRTASLLRDEILPAVQYYAYIEITGSGAVIRGETDLWRSYRTI ADENDHLAIRQVGDRKEIFPVFRELFSRQHDTAEA
Sequences:
>Translated_435_residues MDIIDRRPNPHGKNIENRRRVLQRARAAVQKAVRDSVARGKIREVGQGNAVSIPSDALHEPTFHRVFSEGVREIVLTGNR EFSRGDRLQRPPGGVGQGGGGEGQGGEKGGGEDSFRFVLSRDEFLDLFFDDLELPDLVKREIAATETSKPTRSGLSNEGA PSHLDLGRTMRRSIARRIGLGRPKPDDLREIEARIAELEDRRPLGTEDLDELESLCERRGTLRQRLARIPWVDPVDLRFR RYTVVPQPATRAVMFCIMDVSGSMTERMKDLAKQFFLLLHVFLERRYKKVEIVFIRHAESAEEVDEETFFHDPRTGGTIV SSALELMSSIQRERFPSGSWNIYVAQASDGDNASSDTTRTASLLRDEILPAVQYYAYIEITGSGAVIRGETDLWRSYRTI ADENDHLAIRQVGDRKEIFPVFRELFSRQHDTAEA >Mature_435_residues MDIIDRRPNPHGKNIENRRRVLQRARAAVQKAVRDSVARGKIREVGQGNAVSIPSDALHEPTFHRVFSEGVREIVLTGNR EFSRGDRLQRPPGGVGQGGGGEGQGGEKGGGEDSFRFVLSRDEFLDLFFDDLELPDLVKREIAATETSKPTRSGLSNEGA PSHLDLGRTMRRSIARRIGLGRPKPDDLREIEARIAELEDRRPLGTEDLDELESLCERRGTLRQRLARIPWVDPVDLRFR RYTVVPQPATRAVMFCIMDVSGSMTERMKDLAKQFFLLLHVFLERRYKKVEIVFIRHAESAEEVDEETFFHDPRTGGTIV SSALELMSSIQRERFPSGSWNIYVAQASDGDNASSDTTRTASLLRDEILPAVQYYAYIEITGSGAVIRGETDLWRSYRTI ADENDHLAIRQVGDRKEIFPVFRELFSRQHDTAEA
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=432, Percent_Identity=41.6666666666667, Blast_Score=345, Evalue=4e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 49216; Mature: 49216
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIIDRRPNPHGKNIENRRRVLQRARAAVQKAVRDSVARGKIREVGQGNAVSIPSDALHE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC PTFHRVFSEGVREIVLTGNREFSRGDRLQRPPGGVGQGGGGEGQGGEKGGGEDSFRFVLS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECC RDEFLDLFFDDLELPDLVKREIAATETSKPTRSGLSNEGAPSHLDLGRTMRRSIARRIGL HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC GRPKPDDLREIEARIAELEDRRPLGTEDLDELESLCERRGTLRQRLARIPWVDPVDLRFR CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE RYTVVPQPATRAVMFCIMDVSGSMTERMKDLAKQFFLLLHVFLERRYKKVEIVFIRHAES EEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCC AEEVDEETFFHDPRTGGTIVSSALELMSSIQRERFPSGSWNIYVAQASDGDNASSDTTRT HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHH ASLLRDEILPAVQYYAYIEITGSGAVIRGETDLWRSYRTIADENDHLAIRQVGDRKEIFP HHHHHHHHHHHHEEEEEEEEECCCEEEECCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH VFRELFSRQHDTAEA HHHHHHHCCCCCCCC >Mature Secondary Structure MDIIDRRPNPHGKNIENRRRVLQRARAAVQKAVRDSVARGKIREVGQGNAVSIPSDALHE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC PTFHRVFSEGVREIVLTGNREFSRGDRLQRPPGGVGQGGGGEGQGGEKGGGEDSFRFVLS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECC RDEFLDLFFDDLELPDLVKREIAATETSKPTRSGLSNEGAPSHLDLGRTMRRSIARRIGL HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC GRPKPDDLREIEARIAELEDRRPLGTEDLDELESLCERRGTLRQRLARIPWVDPVDLRFR CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE RYTVVPQPATRAVMFCIMDVSGSMTERMKDLAKQFFLLLHVFLERRYKKVEIVFIRHAES EEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCC AEEVDEETFFHDPRTGGTIVSSALELMSSIQRERFPSGSWNIYVAQASDGDNASSDTTRT HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHH ASLLRDEILPAVQYYAYIEITGSGAVIRGETDLWRSYRTIADENDHLAIRQVGDRKEIFP HHHHHHHHHHHHEEEEEEEEECCCEEEECCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH VFRELFSRQHDTAEA HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]