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The map label for this gene is 162147571

Identifier: 162147571

GI number: 162147571

Start: 1817912

End: 1819174

Strand: Direct

Name: 162147571

Synonym: GDI_1787

Alternate gene names: NA

Gene position: 1817912-1819174 (Clockwise)

Preceding gene: 162147570

Following gene: 162147572

Centisome position: 46.09

GC content: 69.83

Gene sequence:

>1263_bases
ATGAGGGCGGTGCGTGCCGTCCTGGCGCTGGTGACGCTGGGCGTGGCCACGGGCGGCGTGGCCCAGGCCCAGGACCAGGC
CCAAGTTCAGGCCCAGGATTCGGATCTGGTGCGGCGTGGCGCCTATCTGGAGCACGCGGCGGATTGCGAGGTCTGTCATA
CGAAACCGGGCGGCCGGCCCTTTGCGGGCGGGCGGGCCTTCGACCTTCCGGGGATCGGCACGATCTACGCCCCCAACATC
ACCCCGGACCGGGAAACCGGCATCGGCGCCTATACCGACGCGCAGTTCGATTCGGCGGTACGGGCCGGCGTCGCGCCGGG
CTGGACGCATCTCTATCCCGTCATGCCCTACGCATCCTATGCGCGGATGACGGCGGACGACGTGCGTGCCATCCGGGCCT
ATCTGGCGACCCTGGCGCCGGTCCATGCGACGGCACGGGCCAACCGGGTGCGGTTCCCCTACAGTATCCGCCTGGCGATG
GTGGCGTGGAACCTGCTGTATCGGCCCTCCAGCGCGATGACGGACGAACCGGGACGCTCGGCCGCGTGGAATCGTGGCCG
CTATCTGGTCGAGGCCGCGGGCCATTGCGCCGAATGCCATTCGCCCCGCACCATGATGCAGGCGACATCCGGCGCCCGGT
CCTATGCGGGCGCGCTTACTGCGGGGTGGGAGGCGTATAATATCTCCTCCGATCCCGACAGCGGGATCGGGGCATGGACC
GACGCGCAACTGACGGCGTACCTGTCCACCGGCCATGCCGACGGGCGCGGCACGGCCGCCGGACCGATGGCCGAAGTGGT
CGGCTACAGCCTGCGGTATCTGACCCCGCAGGATATCGCGTCCATGGTGACCTATCTGCGCAGCCTGCCGGCCCGGCAGT
CGAACGAGACCGTCGCCGCCATACCGCCGCAGGCCCTGGCCCACGCCACCCCCACGCACAGCAATGGCGAGCGGCTGTTC
GCCGGCGCCTGCGCCGGGTGTCACCTGACGGACGGGCAGGGGCGGCAGGTCGATGAAGCCGCATTGTGGGGCGCGCGCAG
CCTGGGCGAGATCCAGGGGCGGAACCTGATCCAGACCATGGTCCAGGGATCGCGGCTGGATACCGCCCGGGGTGTGATGA
CGATGCCGGCCTTCGGCCCGGAATATCGCGATCAGGACCTGGCGGACCTGGCGAACTACACGATCGGTCACTTCGCCAAC
CGCGTCGGGCACGTCACGGCCCAGGATATCGCGGCAGTGCGGCAGCCGGGGGGCGCGCATTGA

Upstream 100 bases:

>100_bases
GCGAAACCGGCACGGCGGCGGCGGCGGCGGCGCTGGCCAACGCCATGGCCGCCGCCACCGGCCGGCGCTATCGCAGGCTG
CCCCTGACGGGACCCCAGGC

Downstream 100 bases:

>100_bases
GAGGCTTTTGAAACAGCCTCGGAAAAAAGGGGAAAGACCCGACGCGTGGTAGCGGCGGACGGATTTGAACCGCCGACCAA
GGGATTATGATTCCCCTGCT

Product: alcohol dehydrogenase cytochrome c subunit

Products: NA

Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MRAVRAVLALVTLGVATGGVAQAQDQAQVQAQDSDLVRRGAYLEHAADCEVCHTKPGGRPFAGGRAFDLPGIGTIYAPNI
TPDRETGIGAYTDAQFDSAVRAGVAPGWTHLYPVMPYASYARMTADDVRAIRAYLATLAPVHATARANRVRFPYSIRLAM
VAWNLLYRPSSAMTDEPGRSAAWNRGRYLVEAAGHCAECHSPRTMMQATSGARSYAGALTAGWEAYNISSDPDSGIGAWT
DAQLTAYLSTGHADGRGTAAGPMAEVVGYSLRYLTPQDIASMVTYLRSLPARQSNETVAAIPPQALAHATPTHSNGERLF
AGACAGCHLTDGQGRQVDEAALWGARSLGEIQGRNLIQTMVQGSRLDTARGVMTMPAFGPEYRDQDLADLANYTIGHFAN
RVGHVTAQDIAAVRQPGGAH

Sequences:

>Translated_420_residues
MRAVRAVLALVTLGVATGGVAQAQDQAQVQAQDSDLVRRGAYLEHAADCEVCHTKPGGRPFAGGRAFDLPGIGTIYAPNI
TPDRETGIGAYTDAQFDSAVRAGVAPGWTHLYPVMPYASYARMTADDVRAIRAYLATLAPVHATARANRVRFPYSIRLAM
VAWNLLYRPSSAMTDEPGRSAAWNRGRYLVEAAGHCAECHSPRTMMQATSGARSYAGALTAGWEAYNISSDPDSGIGAWT
DAQLTAYLSTGHADGRGTAAGPMAEVVGYSLRYLTPQDIASMVTYLRSLPARQSNETVAAIPPQALAHATPTHSNGERLF
AGACAGCHLTDGQGRQVDEAALWGARSLGEIQGRNLIQTMVQGSRLDTARGVMTMPAFGPEYRDQDLADLANYTIGHFAN
RVGHVTAQDIAAVRQPGGAH
>Mature_420_residues
MRAVRAVLALVTLGVATGGVAQAQDQAQVQAQDSDLVRRGAYLEHAADCEVCHTKPGGRPFAGGRAFDLPGIGTIYAPNI
TPDRETGIGAYTDAQFDSAVRAGVAPGWTHLYPVMPYASYARMTADDVRAIRAYLATLAPVHATARANRVRFPYSIRLAM
VAWNLLYRPSSAMTDEPGRSAAWNRGRYLVEAAGHCAECHSPRTMMQATSGARSYAGALTAGWEAYNISSDPDSGIGAWT
DAQLTAYLSTGHADGRGTAAGPMAEVVGYSLRYLTPQDIASMVTYLRSLPARQSNETVAAIPPQALAHATPTHSNGERLF
AGACAGCHLTDGQGRQVDEAALWGARSLGEIQGRNLIQTMVQGSRLDTARGVMTMPAFGPEYRDQDLADLANYTIGHFAN
RVGHVTAQDIAAVRQPGGAH

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 44599; Mature: 44599

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVRAVLALVTLGVATGGVAQAQDQAQVQAQDSDLVRRGAYLEHAADCEVCHTKPGGRP
CHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHCHHHHHHHCHHHHHCCCCCEEECCCCCCC
FAGGRAFDLPGIGTIYAPNITPDRETGIGAYTDAQFDSAVRAGVAPGWTHLYPVMPYASY
CCCCCEECCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCHHHH
ARMTADDVRAIRAYLATLAPVHATARANRVRFPYSIRLAMVAWNLLYRPSSAMTDEPGRS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC
AAWNRGRYLVEAAGHCAECHSPRTMMQATSGARSYAGALTAGWEAYNISSDPDSGIGAWT
CCCCCCCEEEECCCCHHHHCCCHHHHHHHCCHHHHCCHHHCCCEEEECCCCCCCCCCCCC
DAQLTAYLSTGHADGRGTAAGPMAEVVGYSLRYLTPQDIASMVTYLRSLPARQSNETVAA
CCEEEEEEECCCCCCCCCCCCHHHHHHCCHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEE
IPPQALAHATPTHSNGERLFAGACAGCHLTDGQGRQVDEAALWGARSLGEIQGRNLIQTM
CCCHHHHCCCCCCCCCCEEEEEEECCCEEECCCCCCHHHHHHHCCHHHHHHCCHHHHHHH
VQGSRLDTARGVMTMPAFGPEYRDQDLADLANYTIGHFANRVGHVTAQDIAAVRQPGGAH
HCCCCCCHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MRAVRAVLALVTLGVATGGVAQAQDQAQVQAQDSDLVRRGAYLEHAADCEVCHTKPGGRP
CHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHCHHHHHHHCHHHHHCCCCCEEECCCCCCC
FAGGRAFDLPGIGTIYAPNITPDRETGIGAYTDAQFDSAVRAGVAPGWTHLYPVMPYASY
CCCCCEECCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCHHHH
ARMTADDVRAIRAYLATLAPVHATARANRVRFPYSIRLAMVAWNLLYRPSSAMTDEPGRS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC
AAWNRGRYLVEAAGHCAECHSPRTMMQATSGARSYAGALTAGWEAYNISSDPDSGIGAWT
CCCCCCCEEEECCCCHHHHCCCHHHHHHHCCHHHHCCHHHCCCEEEECCCCCCCCCCCCC
DAQLTAYLSTGHADGRGTAAGPMAEVVGYSLRYLTPQDIASMVTYLRSLPARQSNETVAA
CCEEEEEEECCCCCCCCCCCCHHHHHHCCHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEE
IPPQALAHATPTHSNGERLFAGACAGCHLTDGQGRQVDEAALWGARSLGEIQGRNLIQTM
CCCHHHHCCCCCCCCCCEEEEEEECCCEEECCCCCCHHHHHHHCCHHHHHHCCHHHHHHH
VQGSRLDTARGVMTMPAFGPEYRDQDLADLANYTIGHFANRVGHVTAQDIAAVRQPGGAH
HCCCCCCHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]