| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is iorB [H]
Identifier: 162147570
GI number: 162147570
Start: 1815768
End: 1817915
Strand: Direct
Name: iorB [H]
Synonym: GDI_1786
Alternate gene names: 162147570
Gene position: 1815768-1817915 (Clockwise)
Preceding gene: 162147569
Following gene: 162147571
Centisome position: 46.04
GC content: 70.11
Gene sequence:
>2148_bases ATGGGCCGCACGATGCTGTCGCGCCGCCAGGCCCTGGCGGGCACGGGCGGCCTGCTGCTGGCGGCCATGCTGCCGCGCGG GGCGGCCCGGGCCGCGACCCGGATCGTCGAGGACCAGACCGGCCCGTTCGCGCCCAACGCCTTCGTACGAATCGCACCCG ATGGGGCCATCACGCTGATCCTGCCCAATGTCGAAATGGGGCAGGGGATCTATACCGGCGAGGCGATGCTGATCGCCGAG GAACTGGATATCGGGCTGGAACAGATCCAGATCGAGGCCGCCCCCCCGGACGACGCCTACGTGACCAGGGAACTGGGCAC GCAGGCAACCGGCGGATCGACCTCGACGATCGCGACGTGGAAGAGCCTGCGAGAAGCCGGGGCGGTGGCGCGGACGCTTC TGGTCCAGGCGGCGGCGGCCCAGTGGTCGGTCGATCCCGCATCCTGCACCACCGGGGGCGGCATGGTCCGGCACGAGGCG ACGGGGCGCAGCCTGGCCTATGGCGAACTCGCAACCGCCGCCGCCGCCCTGCCGGTGCCGGCCGCACCCGTGACGCTGCG AGATCCGTCTTCCTTTCGCCTGGTCGGGCGATCCCAGCACCGTCTGGACGCGCCGGCCAAGGTCGCGGGAACCGCGACGT TCGGCATCGACGTGCAGGTACCGGGCATGCGCATCGGCACCGTGGCGGCCTGCCCGGTCATGGGCGGCGTGCTGGCGCAT GTGGATGACAGCGCGGCGCGGCAGGTCCCCGGCGTGCGGGACGTCCTGACGATCGGCAATGCGGTCTGCGTGGTCGGGAA CCATTTCTGGGCAGCGCGCAAGGGGCTGGATGCCCTGGTGATCACATGGGACGAAGGCGTCAACGCGGCGGTTTCCACCG ATACGATCTATCGCCAGTTGCACGAGGCGCTGGACGGTCCGGCCATTACCGCCCACGCCAAGGGCGACGCCAGGGCGGCG ATCGCAGGTGCCACGACGCGGGTCGAGGCCGTGTACCAGCAGCCCCTGCTGGCCCACGCGCCGATGGAGCCGATCAACTG CACCGTGCAGGTCACGCCCGAACGCTGCGACATCTGGGTGGGTTCGCAGGTACCTATGCGCGCGCGCGACGCGGCGGCGG ACATCACCGGGCTGGGCAAGGACCGGGTCCATGTCCACAACCAGTATATCGGCGGCGGCTTCGGCCGGCGGCTGGAACAT GAATATGTCATCCAGGCGGTGCAGTTCGCCCGTCAGGTCGCCTATCCGCTCAAGATCGTCTGGACGCGCGAGGAAGACCT GACGCTGGACCGCTTTCGTCCGGCCTATGTCGATCGCCTGGTCGGCGGCCTGGACCGGAAGGGAAACCTGGTCGGACTGT CGCACCGGATCGTCGGCCCCGCCGTGGTCGCCCGCTGGGCGCCCGAGGCGCTGCTGCCCAACGGGGTGGACGACGACCTG CTGGCCGCGACGGTCGAGACCCCGTACGCCATTCCCGCGATGTTCCTGGATTACGCCCGGCGCGAGGCCCCGGGCGTGGT CACCGCGTGGTGGCGCGGGGTAGGGGGCACGCGGGGCGTCTTCGTGGTCGAAAGCTTCATCGACGAACTGGCGGCGCGTG CCGGGAAGGATGCGGTGGCGTTTCGCCGCCAGATGACCGGGGGCAATCCCCGCGCCCGGGCGGTACTGGACCTGGCCGCC GAAAAGGCGAGCTGGGGCGAGCCGCTGCCCAAGCATGTCGGCCGCGGGATTGCCCTGCAATACGTGTTCGGCTCCTACCT GGCCACGGTGATGGAGGTCGACATGTCCGACATGGACACGGTACGCGTCCTGCGCGCCGTGGTGGCCGTGGATTGCGGCC GGATGGTCAATCCCGACCAGGTCGTATCCCAGATCGAGGGCGGCCTGATCTTCGGCATCAGCGCCGCCCTGTTCAACGAG GTGACGCTGCGCGACGGCCGCGTGCAGGAGACGAATTTCCATTCCTACCGGGTCCTGCGCATGAACGAATCCCCCATGAT CGAGGTGCATCTGGTGAACAGCACCGAGGACCCGGGCGGCATCGGCGAAACCGGCACGGCGGCGGCGGCGGCGGCGCTGG CCAACGCCATGGCCGCCGCCACCGGCCGGCGCTATCGCAGGCTGCCCCTGACGGGACCCCAGGCATGA
Upstream 100 bases:
>100_bases CCGACGAGGAGATCGAGCAGGCGATGGCCGGCAATATCTGTCGCTGCGGCACCTATCGCCGGATTCGCGCGGCTATCCGC AACGCCGCCGGGGCTGCGTG
Downstream 100 bases:
>100_bases GGGCGGTGCGTGCCGTCCTGGCGCTGGTGACGCTGGGCGTGGCCACGGGCGGCGTGGCCCAGGCCCAGGACCAGGCCCAA GTTCAGGCCCAGGATTCGGA
Product: isoquinoline 1-oxidoreductase subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 715; Mature: 714
Protein sequence:
>715_residues MGRTMLSRRQALAGTGGLLLAAMLPRGAARAATRIVEDQTGPFAPNAFVRIAPDGAITLILPNVEMGQGIYTGEAMLIAE ELDIGLEQIQIEAAPPDDAYVTRELGTQATGGSTSTIATWKSLREAGAVARTLLVQAAAAQWSVDPASCTTGGGMVRHEA TGRSLAYGELATAAAALPVPAAPVTLRDPSSFRLVGRSQHRLDAPAKVAGTATFGIDVQVPGMRIGTVAACPVMGGVLAH VDDSAARQVPGVRDVLTIGNAVCVVGNHFWAARKGLDALVITWDEGVNAAVSTDTIYRQLHEALDGPAITAHAKGDARAA IAGATTRVEAVYQQPLLAHAPMEPINCTVQVTPERCDIWVGSQVPMRARDAAADITGLGKDRVHVHNQYIGGGFGRRLEH EYVIQAVQFARQVAYPLKIVWTREEDLTLDRFRPAYVDRLVGGLDRKGNLVGLSHRIVGPAVVARWAPEALLPNGVDDDL LAATVETPYAIPAMFLDYARREAPGVVTAWWRGVGGTRGVFVVESFIDELAARAGKDAVAFRRQMTGGNPRARAVLDLAA EKASWGEPLPKHVGRGIALQYVFGSYLATVMEVDMSDMDTVRVLRAVVAVDCGRMVNPDQVVSQIEGGLIFGISAALFNE VTLRDGRVQETNFHSYRVLRMNESPMIEVHLVNSTEDPGGIGETGTAAAAAALANAMAAATGRRYRRLPLTGPQA
Sequences:
>Translated_715_residues MGRTMLSRRQALAGTGGLLLAAMLPRGAARAATRIVEDQTGPFAPNAFVRIAPDGAITLILPNVEMGQGIYTGEAMLIAE ELDIGLEQIQIEAAPPDDAYVTRELGTQATGGSTSTIATWKSLREAGAVARTLLVQAAAAQWSVDPASCTTGGGMVRHEA TGRSLAYGELATAAAALPVPAAPVTLRDPSSFRLVGRSQHRLDAPAKVAGTATFGIDVQVPGMRIGTVAACPVMGGVLAH VDDSAARQVPGVRDVLTIGNAVCVVGNHFWAARKGLDALVITWDEGVNAAVSTDTIYRQLHEALDGPAITAHAKGDARAA IAGATTRVEAVYQQPLLAHAPMEPINCTVQVTPERCDIWVGSQVPMRARDAAADITGLGKDRVHVHNQYIGGGFGRRLEH EYVIQAVQFARQVAYPLKIVWTREEDLTLDRFRPAYVDRLVGGLDRKGNLVGLSHRIVGPAVVARWAPEALLPNGVDDDL LAATVETPYAIPAMFLDYARREAPGVVTAWWRGVGGTRGVFVVESFIDELAARAGKDAVAFRRQMTGGNPRARAVLDLAA EKASWGEPLPKHVGRGIALQYVFGSYLATVMEVDMSDMDTVRVLRAVVAVDCGRMVNPDQVVSQIEGGLIFGISAALFNE VTLRDGRVQETNFHSYRVLRMNESPMIEVHLVNSTEDPGGIGETGTAAAAAALANAMAAATGRRYRRLPLTGPQA >Mature_714_residues GRTMLSRRQALAGTGGLLLAAMLPRGAARAATRIVEDQTGPFAPNAFVRIAPDGAITLILPNVEMGQGIYTGEAMLIAEE LDIGLEQIQIEAAPPDDAYVTRELGTQATGGSTSTIATWKSLREAGAVARTLLVQAAAAQWSVDPASCTTGGGMVRHEAT GRSLAYGELATAAAALPVPAAPVTLRDPSSFRLVGRSQHRLDAPAKVAGTATFGIDVQVPGMRIGTVAACPVMGGVLAHV DDSAARQVPGVRDVLTIGNAVCVVGNHFWAARKGLDALVITWDEGVNAAVSTDTIYRQLHEALDGPAITAHAKGDARAAI AGATTRVEAVYQQPLLAHAPMEPINCTVQVTPERCDIWVGSQVPMRARDAAADITGLGKDRVHVHNQYIGGGFGRRLEHE YVIQAVQFARQVAYPLKIVWTREEDLTLDRFRPAYVDRLVGGLDRKGNLVGLSHRIVGPAVVARWAPEALLPNGVDDDLL AATVETPYAIPAMFLDYARREAPGVVTAWWRGVGGTRGVFVVESFIDELAARAGKDAVAFRRQMTGGNPRARAVLDLAAE KASWGEPLPKHVGRGIALQYVFGSYLATVMEVDMSDMDTVRVLRAVVAVDCGRMVNPDQVVSQIEGGLIFGISAALFNEV TLRDGRVQETNFHSYRVLRMNESPMIEVHLVNSTEDPGGIGETGTAAAAAALANAMAAATGRRYRRLPLTGPQA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=383, Percent_Identity=26.6318537859008, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 75857; Mature: 75725
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTMLSRRQALAGTGGLLLAAMLPRGAARAATRIVEDQTGPFAPNAFVRIAPDGAITLI CCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEE LPNVEMGQGIYTGEAMLIAEELDIGLEQIQIEAAPPDDAYVTRELGTQATGGSTSTIATW ECCCCCCCCEEECCEEEEEEHHCCCEEEEEEECCCCCCCEEEHHHCCCCCCCCCHHHHHH KSLREAGAVARTLLVQAAAAQWSVDPASCTTGGGMVRHEATGRSLAYGELATAAAALPVP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEHHHHHHHHHHCCCC AAPVTLRDPSSFRLVGRSQHRLDAPAKVAGTATFGIDVQVPGMRIGTVAACPVMGGVLAH CCCEEECCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCEEECHHHHHHHHCCHHHH VDDSAARQVPGVRDVLTIGNAVCVVGNHFWAARKGLDALVITWDEGVNAAVSTDTIYRQL CCCHHHHHCCCHHHHHHHCCEEEEECCCHHHHHCCCCEEEEEECCCCCCEEHHHHHHHHH HEALDGPAITAHAKGDARAAIAGATTRVEAVYQQPLLAHAPMEPINCTVQVTPERCDIWV HHHHCCCEEEEECCCCCCEEEECCHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCCEEE GSQVPMRARDAAADITGLGKDRVHVHNQYIGGGFGRRLEHEYVIQAVQFARQVAYPLKIV CCCCCCCHHHHHHHHHCCCCCCEEEECEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE WTREEDLTLDRFRPAYVDRLVGGLDRKGNLVGLSHRIVGPAVVARWAPEALLPNGVDDDL EECCCCCCHHHCCHHHHHHHHCCCCCCCCEEEECHHHHCHHHHHHCCCHHHCCCCCCHHH LAATVETPYAIPAMFLDYARREAPGVVTAWWRGVGGTRGVFVVESFIDELAARAGKDAVA HEEECCCCCHHHHHHHHHHHHCCCCEEEEHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHH FRRQMTGGNPRARAVLDLAAEKASWGEPLPKHVGRGIALQYVFGSYLATVMEVDMSDMDT HHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHH VRVLRAVVAVDCGRMVNPDQVVSQIEGGLIFGISAALFNEVTLRDGRVQETNFHSYRVLR HHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHEECCCEEECCCCCEEEEEE MNESPMIEVHLVNSTEDPGGIGETGTAAAAAALANAMAAATGRRYRRLPLTGPQA ECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCC >Mature Secondary Structure GRTMLSRRQALAGTGGLLLAAMLPRGAARAATRIVEDQTGPFAPNAFVRIAPDGAITLI CCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEE LPNVEMGQGIYTGEAMLIAEELDIGLEQIQIEAAPPDDAYVTRELGTQATGGSTSTIATW ECCCCCCCCEEECCEEEEEEHHCCCEEEEEEECCCCCCCEEEHHHCCCCCCCCCHHHHHH KSLREAGAVARTLLVQAAAAQWSVDPASCTTGGGMVRHEATGRSLAYGELATAAAALPVP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEHHHHHHHHHHCCCC AAPVTLRDPSSFRLVGRSQHRLDAPAKVAGTATFGIDVQVPGMRIGTVAACPVMGGVLAH CCCEEECCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCEEECHHHHHHHHCCHHHH VDDSAARQVPGVRDVLTIGNAVCVVGNHFWAARKGLDALVITWDEGVNAAVSTDTIYRQL CCCHHHHHCCCHHHHHHHCCEEEEECCCHHHHHCCCCEEEEEECCCCCCEEHHHHHHHHH HEALDGPAITAHAKGDARAAIAGATTRVEAVYQQPLLAHAPMEPINCTVQVTPERCDIWV HHHHCCCEEEEECCCCCCEEEECCHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCCEEE GSQVPMRARDAAADITGLGKDRVHVHNQYIGGGFGRRLEHEYVIQAVQFARQVAYPLKIV CCCCCCCHHHHHHHHHCCCCCCEEEECEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEE WTREEDLTLDRFRPAYVDRLVGGLDRKGNLVGLSHRIVGPAVVARWAPEALLPNGVDDDL EECCCCCCHHHCCHHHHHHHHCCCCCCCCEEEECHHHHCHHHHHHCCCHHHCCCCCCHHH LAATVETPYAIPAMFLDYARREAPGVVTAWWRGVGGTRGVFVVESFIDELAARAGKDAVA HEEECCCCCHHHHHHHHHHHHCCCCEEEEHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHH FRRQMTGGNPRARAVLDLAAEKASWGEPLPKHVGRGIALQYVFGSYLATVMEVDMSDMDT HHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHH VRVLRAVVAVDCGRMVNPDQVVSQIEGGLIFGISAALFNEVTLRDGRVQETNFHSYRVLR HHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHEECCCEEECCCCCEEEEEE MNESPMIEVHLVNSTEDPGGIGETGTAAAAAALANAMAAATGRRYRRLPLTGPQA ECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]