Click here to switch to the map view.

The map label for this gene is 162147367

Identifier: 162147367

GI number: 162147367

Start: 1585443

End: 1586030

Strand: Reverse

Name: 162147367

Synonym: GDI_1581

Alternate gene names: NA

Gene position: 1586030-1585443 (Counterclockwise)

Preceding gene: 162147370

Following gene: 162147366

Centisome position: 40.21

GC content: 65.14

Gene sequence:

>588_bases
GTGATTCACAGGATGCCGAACCGGGCGGGAGGCATCCGAATGGGCGGGGCGTTAGCGTTGCGTGAGGATTATGATGCGGC
GGGACTGCGTGCTCTGGCGCGGACAACGAGGCATGCGGGCCAGGCGCGTCGGCTTCTGGCGCTGGCGGCGATCTACGATG
GTGCGTCACGCGGAGACGCGGCACGACTGGCTGGGACGGATCGGCAGATTGTGCGGGACTGGGTGGTGCGTTTCAACGCC
GAGGGCCCGGATGGCGTGCGGGATCATCATGGGGGCGGTGTCGTTCCCCGCCTGACACCAGCCATGTTGGAAGCGCTGAT
GCGCCGGATCGAGGACGGCCCGATCGCTGCCGTGCATGGGGTGGTGCGCTGGCGGCAGGCTGATCTGGGGCAATGGCTTT
ATGAGGAATTCGGCGTCTCTCTTTCGCGCAGCCGGCTGAGCGCCGTTATCCGGGGCCTCGACTTCCGCCTTCTGACGGGA
CGCCCCCGGCACCATGCCCAGGATCCCGAGGCCCAGGACGTTTTTAAAAAAGCTTCCCCGACGTCATGTGTCAGTGCTGG
ATGTAATCTCCTCAAAACGGCTGGCTGA

Upstream 100 bases:

>100_bases
GGATATCAAGGCGACAGGCTCGGTTCTTAAGACATAATACCAACTCCGGTCCGCCCTGACTCATATGTGATTGCCTGACG
GTATCGTTCTGGAACGAGCT

Downstream 100 bases:

>100_bases
AATTTCCCCAGTTTGACCGAGGACCGTCCTGGCGGGGGCATGCCCCCGCCAGGACGGTCGTTCCCCAAATAACCTGCCTA
TGCCGACGGAAGGGCGAGCA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MIHRMPNRAGGIRMGGALALREDYDAAGLRALARTTRHAGQARRLLALAAIYDGASRGDAARLAGTDRQIVRDWVVRFNA
EGPDGVRDHHGGGVVPRLTPAMLEALMRRIEDGPIAAVHGVVRWRQADLGQWLYEEFGVSLSRSRLSAVIRGLDFRLLTG
RPRHHAQDPEAQDVFKKASPTSCVSAGCNLLKTAG

Sequences:

>Translated_195_residues
MIHRMPNRAGGIRMGGALALREDYDAAGLRALARTTRHAGQARRLLALAAIYDGASRGDAARLAGTDRQIVRDWVVRFNA
EGPDGVRDHHGGGVVPRLTPAMLEALMRRIEDGPIAAVHGVVRWRQADLGQWLYEEFGVSLSRSRLSAVIRGLDFRLLTG
RPRHHAQDPEAQDVFKKASPTSCVSAGCNLLKTAG
>Mature_195_residues
MIHRMPNRAGGIRMGGALALREDYDAAGLRALARTTRHAGQARRLLALAAIYDGASRGDAARLAGTDRQIVRDWVVRFNA
EGPDGVRDHHGGGVVPRLTPAMLEALMRRIEDGPIAAVHGVVRWRQADLGQWLYEEFGVSLSRSRLSAVIRGLDFRLLTG
RPRHHAQDPEAQDVFKKASPTSCVSAGCNLLKTAG

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.xylinum IS1268 ORFA [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21205; Mature: 21205

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHRMPNRAGGIRMGGALALREDYDAAGLRALARTTRHAGQARRLLALAAIYDGASRGDA
CCCCCCCCCCCEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
ARLAGTDRQIVRDWVVRFNAEGPDGVRDHHGGGVVPRLTPAMLEALMRRIEDGPIAAVHG
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
VVRWRQADLGQWLYEEFGVSLSRSRLSAVIRGLDFRLLTGRPRHHAQDPEAQDVFKKASP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCC
TSCVSAGCNLLKTAG
HHHHHHCCHHHHCCC
>Mature Secondary Structure
MIHRMPNRAGGIRMGGALALREDYDAAGLRALARTTRHAGQARRLLALAAIYDGASRGDA
CCCCCCCCCCCEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
ARLAGTDRQIVRDWVVRFNAEGPDGVRDHHGGGVVPRLTPAMLEALMRRIEDGPIAAVHG
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
VVRWRQADLGQWLYEEFGVSLSRSRLSAVIRGLDFRLLTGRPRHHAQDPEAQDVFKKASP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCC
TSCVSAGCNLLKTAG
HHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]