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The map label for this gene is ydiF [H]

Identifier: 162147324

GI number: 162147324

Start: 1539986

End: 1541581

Strand: Direct

Name: ydiF [H]

Synonym: GDI_1530

Alternate gene names: 162147324

Gene position: 1539986-1541581 (Clockwise)

Preceding gene: 162147323

Following gene: 162147325

Centisome position: 39.04

GC content: 66.42

Gene sequence:

>1596_bases
ATGTCGAAAGTCAAGCAGGCCGCGGACGTCGCAACGCTGATCAGGGACGGCGCCGTGATCGCGGTCAATTCGTCCAGCGG
GCTCTGCTGCCCGGATGCGGTGCTGGCCGCGATCGGCGCGCAGTACCGCGATCATGGCACGCCCCGGAACGTCACCATGA
TCCATCCCATCGCGGCGGGCGACATGTTCGGCACCAAGGGCGTCGATCACCTGGCCCAGCCCGGCCTGATCGCGACCATC
ATCGGCGGGTCCTATCCGTCCGGTCCGTCCAGCGCGGAACCGCCGGTGATCCGCCAGATGATCGCCCGCAACGAGGTCGC
GGCCTATAACGTGCCCAGCGGCATCATCTTCGACCTGCTGCGCGAGGGCGCGGCCAGGCGTCCCGGCGTGATGACGCAGG
TCGGCATGGATACGTTCGTCGATCCGGACCAGGAGGGCTGCGCGATGAACGACGCGGCGCGCGAGAAGCCGATCGTGCGC
CGTATTGCCTTCGAAGGCGAGGACTGGCTGTATTTCCAGGCCATCCATCCCGACGTCGCGGTGATCCGTGCCAGCACCGC
CGACGAACGCGGCAACCTGACCTTTGAAAACGAGGGCGCCTATCTGGGTGCGATGGAACTGGCCCTTGCGGCGCACAACA
ATGGCGGCATGGTGATCGCGCAGGTCAAGCGCGTGGCCCAGTCCGGCACGCTCAAGCCGCACGACGTGCGTGTGCCCGGC
ATCCTGGTCGATTACGTGATCGAGGCGCCGGACCAGTTGCAGACCACGGCCACCCCGTACGATCCGGCGATTTCCGGCGA
AATCTTCCGCCCGCTCGACAGTTTCGAACTGCCGCCCTTCGACGTCGCGAAGGTCATGGCGCGCCGCGTCGCCTGCGAAC
TGCAAACCGGGTGGGCGGTGAATATCGGCTTCGGCATCTGCGCCGTCGTTCCGCGCGTGCTGCTGGAACAGGGCCGCCAC
GGCGACGTGACATGGGTCATCGAACAGGGCGCCGTGGGCGGCGTGCCCCTGCTGGACTTCAAGTTCGGATGCTCGTCCAA
TGCCGAGGCCTTCGTCGCCTCGCCGCACCAGTTCACCTATTTCCAGGCCGGGGGGTTCGATGTCTCGCTGCTGTCCTTCC
TGCAGATCGATCGCCATGGCTCGGTCAATGTCTCGAAACTCTCGGCCCGGCCGCACGTGACGGCGGGGTCGGGCGGCTTC
GTCGACATCACCTCGCGCGCACGCCGCATCATCTTCACCGGCTATTTCAACGCCGGGGCCAGACTGAGTATCGCCGACGG
CAAGGTCTCCATCGACCGCGAGGGAAAGATCGCGAAGATCGTCGAAAAGCTGGAGCAGGTCTCCTTCTCCGGAAAACGCG
CCATCGCGCAGGGGCAGGAGGTGATGTACGTCACCGAACGCTGCGTGATGAAGCTGACGCCGGACGGGCTGATGGTCACG
GAAATCGCGCCCGGCATCGATCTGCAGACGCAGATCCTCGACCAGGCGGAAATCCCGCTGCTGGTCGCGCCCGACCTGCG
CGTGATGGACGCGGCGCTGTTCCGGCCCGACGGCAAGGCGCCGGTGTCCGAACCCGCCAAGCAGGCCGCCGCCTGA

Upstream 100 bases:

>100_bases
ATGATCGCCGAGCGCGCCGCCGACCTGATCCGGGGCAATGCCTAGGCTCGGTCGGGTCCGGTAAAGTATCTAACCAGATA
GTTTTCAAGAGAGACGCACC

Downstream 100 bases:

>100_bases
ACCCGAGGACCGCCCCCGCCGGATGCCCGGCCGGGGCATCTGGCGCGGAGCTATATAAATATCCTGTTACTTCATGAAAA
ATGATAGGTCTTATGCATCC

Product: acyl-CoA transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MSKVKQAADVATLIRDGAVIAVNSSSGLCCPDAVLAAIGAQYRDHGTPRNVTMIHPIAAGDMFGTKGVDHLAQPGLIATI
IGGSYPSGPSSAEPPVIRQMIARNEVAAYNVPSGIIFDLLREGAARRPGVMTQVGMDTFVDPDQEGCAMNDAAREKPIVR
RIAFEGEDWLYFQAIHPDVAVIRASTADERGNLTFENEGAYLGAMELALAAHNNGGMVIAQVKRVAQSGTLKPHDVRVPG
ILVDYVIEAPDQLQTTATPYDPAISGEIFRPLDSFELPPFDVAKVMARRVACELQTGWAVNIGFGICAVVPRVLLEQGRH
GDVTWVIEQGAVGGVPLLDFKFGCSSNAEAFVASPHQFTYFQAGGFDVSLLSFLQIDRHGSVNVSKLSARPHVTAGSGGF
VDITSRARRIIFTGYFNAGARLSIADGKVSIDREGKIAKIVEKLEQVSFSGKRAIAQGQEVMYVTERCVMKLTPDGLMVT
EIAPGIDLQTQILDQAEIPLLVAPDLRVMDAALFRPDGKAPVSEPAKQAAA

Sequences:

>Translated_531_residues
MSKVKQAADVATLIRDGAVIAVNSSSGLCCPDAVLAAIGAQYRDHGTPRNVTMIHPIAAGDMFGTKGVDHLAQPGLIATI
IGGSYPSGPSSAEPPVIRQMIARNEVAAYNVPSGIIFDLLREGAARRPGVMTQVGMDTFVDPDQEGCAMNDAAREKPIVR
RIAFEGEDWLYFQAIHPDVAVIRASTADERGNLTFENEGAYLGAMELALAAHNNGGMVIAQVKRVAQSGTLKPHDVRVPG
ILVDYVIEAPDQLQTTATPYDPAISGEIFRPLDSFELPPFDVAKVMARRVACELQTGWAVNIGFGICAVVPRVLLEQGRH
GDVTWVIEQGAVGGVPLLDFKFGCSSNAEAFVASPHQFTYFQAGGFDVSLLSFLQIDRHGSVNVSKLSARPHVTAGSGGF
VDITSRARRIIFTGYFNAGARLSIADGKVSIDREGKIAKIVEKLEQVSFSGKRAIAQGQEVMYVTERCVMKLTPDGLMVT
EIAPGIDLQTQILDQAEIPLLVAPDLRVMDAALFRPDGKAPVSEPAKQAAA
>Mature_530_residues
SKVKQAADVATLIRDGAVIAVNSSSGLCCPDAVLAAIGAQYRDHGTPRNVTMIHPIAAGDMFGTKGVDHLAQPGLIATII
GGSYPSGPSSAEPPVIRQMIARNEVAAYNVPSGIIFDLLREGAARRPGVMTQVGMDTFVDPDQEGCAMNDAAREKPIVRR
IAFEGEDWLYFQAIHPDVAVIRASTADERGNLTFENEGAYLGAMELALAAHNNGGMVIAQVKRVAQSGTLKPHDVRVPGI
LVDYVIEAPDQLQTTATPYDPAISGEIFRPLDSFELPPFDVAKVMARRVACELQTGWAVNIGFGICAVVPRVLLEQGRHG
DVTWVIEQGAVGGVPLLDFKFGCSSNAEAFVASPHQFTYFQAGGFDVSLLSFLQIDRHGSVNVSKLSARPHVTAGSGGFV
DITSRARRIIFTGYFNAGARLSIADGKVSIDREGKIAKIVEKLEQVSFSGKRAIAQGQEVMYVTERCVMKLTPDGLMVTE
IAPGIDLQTQILDQAEIPLLVAPDLRVMDAALFRPDGKAPVSEPAKQAAA

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Escherichia coli, GI1787985, Length=515, Percent_Identity=37.6699029126214, Blast_Score=365, Evalue=1e-102,
Organism=Escherichia coli, GI1788551, Length=246, Percent_Identity=24.390243902439, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24655794, Length=535, Percent_Identity=24.2990654205607, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21358325, Length=535, Percent_Identity=24.2990654205607, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 56687; Mature: 56555

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVKQAADVATLIRDGAVIAVNSSSGLCCPDAVLAAIGAQYRDHGTPRNVTMIHPIAAG
CCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
DMFGTKGVDHLAQPGLIATIIGGSYPSGPSSAEPPVIRQMIARNEVAAYNVPSGIIFDLL
CCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHH
REGAARRPGVMTQVGMDTFVDPDQEGCAMNDAAREKPIVRRIAFEGEDWLYFQAIHPDVA
HHCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCHHHHHHEECCCCEEEEEEECCCEE
VIRASTADERGNLTFENEGAYLGAMELALAAHNNGGMVIAQVKRVAQSGTLKPHDVRVPG
EEEECCCCCCCCEEECCCCCEEEEEEEEEEEECCCCEEHHHHHHHHHCCCCCCCCEECCC
ILVDYVIEAPDQLQTTATPYDPAISGEIFRPLDSFELPPFDVAKVMARRVACELQTGWAV
EEEEHHHCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHEEECCCEEE
NIGFGICAVVPRVLLEQGRHGDVTWVIEQGAVGGVPLLDFKFGCSSNAEAFVASPHQFTY
EECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCEEEE
FQAGGFDVSLLSFLQIDRHGSVNVSKLSARPHVTAGSGGFVDITSRARRIIFTGYFNAGA
EECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCEEEECCCCCEEEEEEEECCCC
RLSIADGKVSIDREGKIAKIVEKLEQVSFSGKRAIAQGQEVMYVTERCVMKLTPDGLMVT
EEEEECCEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCCEEEEEEHHHHEEECCCCEEEE
EIAPGIDLQTQILDQAEIPLLVAPDLRVMDAALFRPDGKAPVSEPAKQAAA
ECCCCCCHHHHHHCCCCCCEEECCCCHHHHHHHCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure 
SKVKQAADVATLIRDGAVIAVNSSSGLCCPDAVLAAIGAQYRDHGTPRNVTMIHPIAAG
CHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
DMFGTKGVDHLAQPGLIATIIGGSYPSGPSSAEPPVIRQMIARNEVAAYNVPSGIIFDLL
CCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHH
REGAARRPGVMTQVGMDTFVDPDQEGCAMNDAAREKPIVRRIAFEGEDWLYFQAIHPDVA
HHCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCHHHHHHEECCCCEEEEEEECCCEE
VIRASTADERGNLTFENEGAYLGAMELALAAHNNGGMVIAQVKRVAQSGTLKPHDVRVPG
EEEECCCCCCCCEEECCCCCEEEEEEEEEEEECCCCEEHHHHHHHHHCCCCCCCCEECCC
ILVDYVIEAPDQLQTTATPYDPAISGEIFRPLDSFELPPFDVAKVMARRVACELQTGWAV
EEEEHHHCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHEEECCCEEE
NIGFGICAVVPRVLLEQGRHGDVTWVIEQGAVGGVPLLDFKFGCSSNAEAFVASPHQFTY
EECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCEEEE
FQAGGFDVSLLSFLQIDRHGSVNVSKLSARPHVTAGSGGFVDITSRARRIIFTGYFNAGA
EECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCEEEECCCCCEEEEEEEECCCC
RLSIADGKVSIDREGKIAKIVEKLEQVSFSGKRAIAQGQEVMYVTERCVMKLTPDGLMVT
EEEEECCEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCCEEEEEEHHHHEEECCCCEEEE
EIAPGIDLQTQILDQAEIPLLVAPDLRVMDAALFRPDGKAPVSEPAKQAAA
ECCCCCCHHHHHHCCCCCCEEECCCCHHHHHHHCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]