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The map label for this gene is qseC [H]

Identifier: 162147306

GI number: 162147306

Start: 1519578

End: 1520963

Strand: Reverse

Name: qseC [H]

Synonym: GDI_1511

Alternate gene names: 162147306

Gene position: 1520963-1519578 (Counterclockwise)

Preceding gene: 162147307

Following gene: 162147301

Centisome position: 38.56

GC content: 69.77

Gene sequence:

>1386_bases
GTGACGCGCCCCGCCGGGGGACGCCCCACCGGAGGACGATGGAGCCTGGCCACCCGCATCATGGCCGGGGTGCTGGTGGT
CGTTCTGGGCTGCCTGATGCTGCTGAGCGTGCTGGTCGCCGGCTTCACGCGCTACGAGGTCACGGAACGGCTGGACAATT
CCCTTCAGGAAGTGGCCGAGCGGCTGGAATTCGTCATTGCCGCCGTGGCCCCCCGCCCGCATGGCGGCACAGCCGGCGAC
GTGGCCCTGCTGCCCCAGGTCGGGCCGCGCACCCTGGCCTACCAGATCGCGGCCGCGGACGGGCATCTGGTGCTGCGGTC
GCAGAACGCGCCGGCTTCGGTGTTCGTGCCGTCGCTGCGGCCCGGTTTCTATGACCGGCCGCGCTTTCGCGTCTATGTCG
TGAAATCGTCGGATGGCGGGCATACCATCCTGGTGGGCGAGCCGACCTTCCACCGGCGCGAGGCCGTGCGGCGGGCGACG
CTGATTTCGGTCCTGCCGATGGTGGTGTTCCTGCCCTGCGTGTGGCTGCTGGTGCGCTGGGTGGTGCGTCGCGCCCTGCG
CCCGCTGACCGACCTGCAGGCCGAAATCCGCGTGCGCGGCGGCGGCAACCTGGCGCCCATTCCAGCGCTTGACCTGCCCG
GCGAACTGTCGGCCATCCATGCGGCGGTCAATTCGCTGCTGGACCGGCTGAAGAAGGCGCTGTCGTCGGAACGCGCGTTC
GCGGCCAACGCGGCGCACGAACTGCGCAACCCGATCGGCGCCCTGCTGGGGCAGGCGCAGATGCTGCGCGAGCAGTTGCA
CGAACCCGAGGCCCCCGCCCGCGCCGCCGCCATGATCGCGCAGATCCGCCGGCTGGGCCGGATGACGGAAAAGCTGCTGC
AGCTCTCGCGCGCCTCGTCGGGCGCGGCGATGGCCGACGACCGGTTCGACCTTGTCGCGGTGTTGCAGATCCTGGCCGAG
GAATTCCAGGACATGCCCCCCGCCTTTCGCGAGGTCATCGTGACCTGCGACGGGATAGAGGCGCTGTTCGTGCGCGGCGA
CATGGACGCGGCGGGCATCCTGTTCCGCAACCTGATCGAAAACGCCGCCCATCACGGCACGCCCGGCACCCCCATCACCG
TCATGCTGACCCGTGGGGGCGTGGTCGAGATTATCAACGACTGCGCGCCCCTGCCGCCCGATATCCTGGGGCACCTGACG
GAACCGTTCGTGCGCGGCGGCAGCGGGGCGGACGGCAGCGGGCTGGGCCTGGCCATCGTGGCCAGCATCGCGGGCCAGAT
GGGCGCGCGGCTGGACATTGCATCACCCGTTCCGGGGGAATTTCGGGTGCGTGTGGCGGTGAAGGACGTGGCCTCTTTTT
CTGAAGAAGAAGAAGCCACTTGCTGA

Upstream 100 bases:

>100_bases
CGATCGAGGTCTTCATCAGCCGCGTGCGCAAGAAGGTCGGGGCCGGGCTGATCCGGACGGTGCGCGGACGTGGCTATCGC
CTGGCGCGCGAGGACGGCGC

Downstream 100 bases:

>100_bases
CCTCCGGACGCCTTATCCGGCCTGCGGCGACAGACGCCCCGCACGGGACAGCAGAACCAGCACCACACCAAGCAGGCTGA
TTCCCAGTCCCGCAGCCGAA

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MTRPAGGRPTGGRWSLATRIMAGVLVVVLGCLMLLSVLVAGFTRYEVTERLDNSLQEVAERLEFVIAAVAPRPHGGTAGD
VALLPQVGPRTLAYQIAAADGHLVLRSQNAPASVFVPSLRPGFYDRPRFRVYVVKSSDGGHTILVGEPTFHRREAVRRAT
LISVLPMVVFLPCVWLLVRWVVRRALRPLTDLQAEIRVRGGGNLAPIPALDLPGELSAIHAAVNSLLDRLKKALSSERAF
AANAAHELRNPIGALLGQAQMLREQLHEPEAPARAAAMIAQIRRLGRMTEKLLQLSRASSGAAMADDRFDLVAVLQILAE
EFQDMPPAFREVIVTCDGIEALFVRGDMDAAGILFRNLIENAAHHGTPGTPITVMLTRGGVVEIINDCAPLPPDILGHLT
EPFVRGGSGADGSGLGLAIVASIAGQMGARLDIASPVPGEFRVRVAVKDVASFSEEEEATC

Sequences:

>Translated_461_residues
MTRPAGGRPTGGRWSLATRIMAGVLVVVLGCLMLLSVLVAGFTRYEVTERLDNSLQEVAERLEFVIAAVAPRPHGGTAGD
VALLPQVGPRTLAYQIAAADGHLVLRSQNAPASVFVPSLRPGFYDRPRFRVYVVKSSDGGHTILVGEPTFHRREAVRRAT
LISVLPMVVFLPCVWLLVRWVVRRALRPLTDLQAEIRVRGGGNLAPIPALDLPGELSAIHAAVNSLLDRLKKALSSERAF
AANAAHELRNPIGALLGQAQMLREQLHEPEAPARAAAMIAQIRRLGRMTEKLLQLSRASSGAAMADDRFDLVAVLQILAE
EFQDMPPAFREVIVTCDGIEALFVRGDMDAAGILFRNLIENAAHHGTPGTPITVMLTRGGVVEIINDCAPLPPDILGHLT
EPFVRGGSGADGSGLGLAIVASIAGQMGARLDIASPVPGEFRVRVAVKDVASFSEEEEATC
>Mature_460_residues
TRPAGGRPTGGRWSLATRIMAGVLVVVLGCLMLLSVLVAGFTRYEVTERLDNSLQEVAERLEFVIAAVAPRPHGGTAGDV
ALLPQVGPRTLAYQIAAADGHLVLRSQNAPASVFVPSLRPGFYDRPRFRVYVVKSSDGGHTILVGEPTFHRREAVRRATL
ISVLPMVVFLPCVWLLVRWVVRRALRPLTDLQAEIRVRGGGNLAPIPALDLPGELSAIHAAVNSLLDRLKKALSSERAFA
ANAAHELRNPIGALLGQAQMLREQLHEPEAPARAAAMIAQIRRLGRMTEKLLQLSRASSGAAMADDRFDLVAVLQILAEE
FQDMPPAFREVIVTCDGIEALFVRGDMDAAGILFRNLIENAAHHGTPGTPITVMLTRGGVVEIINDCAPLPPDILGHLTE
PFVRGGSGADGSGLGLAIVASIAGQMGARLDIASPVPGEFRVRVAVKDVASFSEEEEATC

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790551, Length=280, Percent_Identity=30.7142857142857, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1789403, Length=457, Percent_Identity=27.1334792122538, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI1786600, Length=209, Percent_Identity=31.5789473684211, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1788393, Length=232, Percent_Identity=29.3103448275862, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786783, Length=226, Percent_Identity=26.9911504424779, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87082128, Length=291, Percent_Identity=22.680412371134, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788279, Length=301, Percent_Identity=24.2524916943522, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 49341; Mature: 49210

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPAGGRPTGGRWSLATRIMAGVLVVVLGCLMLLSVLVAGFTRYEVTERLDNSLQEVAE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLEFVIAAVAPRPHGGTAGDVALLPQVGPRTLAYQIAAADGHLVLRSQNAPASVFVPSLR
HHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCEEEEECCCCCCEEECCCCC
PGFYDRPRFRVYVVKSSDGGHTILVGEPTFHRREAVRRATLISVLPMVVFLPCVWLLVRW
CCCCCCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRRALRPLTDLQAEIRVRGGGNLAPIPALDLPGELSAIHAAVNSLLDRLKKALSSERAF
HHHHHHCHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AANAAHELRNPIGALLGQAQMLREQLHEPEAPARAAAMIAQIRRLGRMTEKLLQLSRASS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAAMADDRFDLVAVLQILAEEFQDMPPAFREVIVTCDGIEALFVRGDMDAAGILFRNLIE
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH
NAAHHGTPGTPITVMLTRGGVVEIINDCAPLPPDILGHLTEPFVRGGSGADGSGLGLAIV
HHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
ASIAGQMGARLDIASPVPGEFRVRVAVKDVASFSEEEEATC
HHHHHHHCCCEECCCCCCCCEEEEEEHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TRPAGGRPTGGRWSLATRIMAGVLVVVLGCLMLLSVLVAGFTRYEVTERLDNSLQEVAE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLEFVIAAVAPRPHGGTAGDVALLPQVGPRTLAYQIAAADGHLVLRSQNAPASVFVPSLR
HHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCEEEEECCCCCCEEECCCCC
PGFYDRPRFRVYVVKSSDGGHTILVGEPTFHRREAVRRATLISVLPMVVFLPCVWLLVRW
CCCCCCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRRALRPLTDLQAEIRVRGGGNLAPIPALDLPGELSAIHAAVNSLLDRLKKALSSERAF
HHHHHHCHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AANAAHELRNPIGALLGQAQMLREQLHEPEAPARAAAMIAQIRRLGRMTEKLLQLSRASS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAAMADDRFDLVAVLQILAEEFQDMPPAFREVIVTCDGIEALFVRGDMDAAGILFRNLIE
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH
NAAHHGTPGTPITVMLTRGGVVEIINDCAPLPPDILGHLTEPFVRGGSGADGSGLGLAIV
HHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
ASIAGQMGARLDIASPVPGEFRVRVAVKDVASFSEEEEATC
HHHHHHHCCCEECCCCCCCCEEEEEEHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]