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The map label for this gene is qseB [H]

Identifier: 162147307

GI number: 162147307

Start: 1520960

End: 1521658

Strand: Reverse

Name: qseB [H]

Synonym: GDI_1512

Alternate gene names: 162147307

Gene position: 1521658-1520960 (Counterclockwise)

Preceding gene: 162147308

Following gene: 162147306

Centisome position: 38.58

GC content: 69.38

Gene sequence:

>699_bases
GTGCGAATCCTGATCATCGAGGACGAAGCCCCGCTGGGATCGGCCGTGCAGGAACGGCTGCGCCGGGCCGGGCATGCCGC
CGACTGGTTCACCACGCTGGGCGATGCCCGTGCCGCCCTGGCCGCCGCATCCTATGACGTCCTGCTGCTGGATCTGGGCC
TGCCCGACGGCAGCGGCCGCGACCTGCTACGCGAGATCCGCCGAAATGGTCATGGGGGAAACGGCCTGGGGGGGAACGGG
TCCGCGATGGCGATCCTGATCACCACCGCGCAGGACCAGATCAGCGACCGCATCGCCGGCCTGTCGGACGGGGCGGACGA
TTATATCGTCAAACCCTACGATTTCGACGAATTGCTGGCGCGGCTGGATGCCGTGTCGCGCCGCTATGTCGCGCTGGTCG
ATAATCGCCTGGCGCTGGGCGAGGTCGAGATCGACCTGTCCCGCCGCCGCCTGTCCCGCCTGGGCGCGGAAGTGGACCTG
ACGGCGCGCGAATGGGCGGTGATCGAACTGCTGGCCCGCCGCGCCGGCGCGATCTGCTCGCGCGAGCAGATCGAGGACGC
GCTCTACGGCCTGGGCGAGGAAATCGAGAGCAACGCGATCGAGGTCTTCATCAGCCGCGTGCGCAAGAAGGTCGGGGCCG
GGCTGATCCGGACGGTGCGCGGACGTGGCTATCGCCTGGCGCGCGAGGACGGCGCGTGA

Upstream 100 bases:

>100_bases
TGGCCACCGTGGTGATCGGGGGACTGGTATCGTCCACGTTGCTGACTTTGCTGGTGCTGCCGTCGCTTTATGCGCGCGTC
ATGCGGGAGCGGAATGACCG

Downstream 100 bases:

>100_bases
CGCGCCCCGCCGGGGGACGCCCCACCGGAGGACGATGGAGCCTGGCCACCCGCATCATGGCCGGGGTGCTGGTGGTCGTT
CTGGGCTGCCTGATGCTGCT

Product: two component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MRILIIEDEAPLGSAVQERLRRAGHAADWFTTLGDARAALAAASYDVLLLDLGLPDGSGRDLLREIRRNGHGGNGLGGNG
SAMAILITTAQDQISDRIAGLSDGADDYIVKPYDFDELLARLDAVSRRYVALVDNRLALGEVEIDLSRRRLSRLGAEVDL
TAREWAVIELLARRAGAICSREQIEDALYGLGEEIESNAIEVFISRVRKKVGAGLIRTVRGRGYRLAREDGA

Sequences:

>Translated_232_residues
MRILIIEDEAPLGSAVQERLRRAGHAADWFTTLGDARAALAAASYDVLLLDLGLPDGSGRDLLREIRRNGHGGNGLGGNG
SAMAILITTAQDQISDRIAGLSDGADDYIVKPYDFDELLARLDAVSRRYVALVDNRLALGEVEIDLSRRRLSRLGAEVDL
TAREWAVIELLARRAGAICSREQIEDALYGLGEEIESNAIEVFISRVRKKVGAGLIRTVRGRGYRLAREDGA
>Mature_232_residues
MRILIIEDEAPLGSAVQERLRRAGHAADWFTTLGDARAALAAASYDVLLLDLGLPDGSGRDLLREIRRNGHGGNGLGGNG
SAMAILITTAQDQISDRIAGLSDGADDYIVKPYDFDELLARLDAVSRRYVALVDNRLALGEVEIDLSRRRLSRLGAEVDL
TAREWAVIELLARRAGAICSREQIEDALYGLGEEIESNAIEVFISRVRKKVGAGLIRTVRGRGYRLAREDGA

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. Currently it is not known whether this effect is direct or not [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=41.5929203539823, Blast_Score=169, Evalue=1e-43,
Organism=Escherichia coli, GI1790552, Length=227, Percent_Identity=37.8854625550661, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1787375, Length=228, Percent_Identity=35.9649122807018, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1786784, Length=236, Percent_Identity=33.8983050847458, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI87082012, Length=234, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1786599, Length=231, Percent_Identity=29.4372294372294, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1788394, Length=231, Percent_Identity=33.7662337662338, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1786911, Length=235, Percent_Identity=31.9148936170213, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787229, Length=234, Percent_Identity=31.1965811965812, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1790860, Length=235, Percent_Identity=28.0851063829787, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789809, Length=235, Percent_Identity=29.3617021276596, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI2367329, Length=240, Percent_Identity=30.4166666666667, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1790863, Length=243, Percent_Identity=26.3374485596708, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25238; Mature: 25238

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILIIEDEAPLGSAVQERLRRAGHAADWFTTLGDARAALAAASYDVLLLDLGLPDGSGR
CEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCH
DLLREIRRNGHGGNGLGGNGSAMAILITTAQDQISDRIAGLSDGADDYIVKPYDFDELLA
HHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEECCCCHHHHHH
RLDAVSRRYVALVDNRLALGEVEIDLSRRRLSRLGAEVDLTAREWAVIELLARRAGAICS
HHHHHHHHHHHHHCCCEEECEEEEHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCHHH
REQIEDALYGLGEEIESNAIEVFISRVRKKVGAGLIRTVRGRGYRLAREDGA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEECCCCCC
>Mature Secondary Structure
MRILIIEDEAPLGSAVQERLRRAGHAADWFTTLGDARAALAAASYDVLLLDLGLPDGSGR
CEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCH
DLLREIRRNGHGGNGLGGNGSAMAILITTAQDQISDRIAGLSDGADDYIVKPYDFDELLA
HHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCEECCCCHHHHHH
RLDAVSRRYVALVDNRLALGEVEIDLSRRRLSRLGAEVDLTAREWAVIELLARRAGAICS
HHHHHHHHHHHHHCCCEEECEEEEHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCHHH
REQIEDALYGLGEEIESNAIEVFISRVRKKVGAGLIRTVRGRGYRLAREDGA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]