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The map label for this gene is nagD [C]

Identifier: 162147286

GI number: 162147286

Start: 1498132

End: 1498971

Strand: Direct

Name: nagD [C]

Synonym: GDI_1491

Alternate gene names: 162147286

Gene position: 1498132-1498971 (Clockwise)

Preceding gene: 162147285

Following gene: 162147291

Centisome position: 37.98

GC content: 72.86

Gene sequence:

>840_bases
ATGAACCCGCGCGCGCTGGCCGGCATCGCGGCGCTGGTGGGGCACTACGATGTCCTGTTCGTGGATCAGTTCGGCGTCCT
GCATGATGGCACGGCGCCTTATCCGGGGGTGCGCGATGCGCTGGCCCGCCTGCGCGATGCGGGGCAGCGCGTGGTGCTGC
TCAGCAATTCGGGGCGGCCCGGCCCCTATAACGCGGGCCGGCTGGCGCGGCTGGGGCTGGGGCCCGAACTGTACGAGACG
ATCGTGACCTCGGGCGACACGGCCCTGGCGCTGGCACGGTCGGGTGAAATCCCGGTGCGGCCGGGCATGCGCTGCCTGCT
GATCGATAGCGGCGGGCAGGACACGGCGTTCTGCGACGCGCTGGGCCTGGTGGTCGAGGCCGAACCGGCGCGGGCGGACC
TGGTGCTGATCGCGGGCAGCCGGGGCGACGTGGTGACCGAGGCCGAATACCGCGCCATGCTGGCACCGCTGGCCCGGCGT
GGCGCGCGCGCGGTCTGCACCAACCCCGACCGGCGGATGCTGGTGCCCGGTGGGACCGCCTTCGGCGCCGGGCGCATCGC
CGAACTGTACGAGGAGGAAGGCGGCACGGTGGACTGGATCGGCAAGCCCCATCCAGCCATCTACGCCCATGCCGCGCGGC
TGTGCCGCGTGCGGGCCGAACGTGTGCTGTGCATCGGCGACAGCGTGGAACATGACATCGCCGGCGCACGCGGGTTCGGC
GCCGACAGCGCGCTGGTTCGGACGGGCATCCTGGCCGATGCCGCCCCCGCCGCGCTGCGGGCCGCGTTCGTGCGGCATGG
GGTGTGGCCGGATTACGTTCTGCCGGGGCTGGTCTGGTAA

Upstream 100 bases:

>100_bases
CCAGGATCGGGGTGCCGTTCTTGCCCAGCGTGTCCGAGGACGCATGCGTGGGCGCGGCGCGTCTGGGTCTGTTCGGGGGC
CTGTCCGAGGGGAAGGCGGC

Downstream 100 bases:

>100_bases
CCGCGCACCGCCGCGACCACGACGTTTTCCACCAGCACGATCAGCACCAGGATCAGGCCCATCATGCCGGCCTGCAGGGT
CGGGTTGAAATCGTTGTAGT

Product: haloacid dehalogenase-like hydrolase

Products: NA

Alternate protein names: HAD-Superfamily Subfamily IIA Hydrolase; HAD-Superfamily Hydrolase; HAD-Superfamily Hydrolase Subfamily IIA; HAD-Superfamily Subfamily IIA Hydrolase Like Protein; HAD-Superfamily Subfamily IIA Hydrolase TIGR; Hydrolase; HAD Superfamily Hydrolase; Had-Superfamily Subfamily IIa Hydrolase Like Protein; Sugar Phosphatases Of HAD Superfamily; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase; N-Acetyl-Glucosamine Catabolism Protein; Haloacid Dehalogenase Domain Protein Hydrolase; Hydrolase IIA; HAD Family Sugar Phosphatase; Sugar Phosphatase Of HAD Superfamily; Sugar Phosphatase; HAD-Superfamily Subfamily IIA Hydrolase-Like Protein; P-Nitrophenyl Phosphatase

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNPRALAGIAALVGHYDVLFVDQFGVLHDGTAPYPGVRDALARLRDAGQRVVLLSNSGRPGPYNAGRLARLGLGPELYET
IVTSGDTALALARSGEIPVRPGMRCLLIDSGGQDTAFCDALGLVVEAEPARADLVLIAGSRGDVVTEAEYRAMLAPLARR
GARAVCTNPDRRMLVPGGTAFGAGRIAELYEEEGGTVDWIGKPHPAIYAHAARLCRVRAERVLCIGDSVEHDIAGARGFG
ADSALVRTGILADAAPAALRAAFVRHGVWPDYVLPGLVW

Sequences:

>Translated_279_residues
MNPRALAGIAALVGHYDVLFVDQFGVLHDGTAPYPGVRDALARLRDAGQRVVLLSNSGRPGPYNAGRLARLGLGPELYET
IVTSGDTALALARSGEIPVRPGMRCLLIDSGGQDTAFCDALGLVVEAEPARADLVLIAGSRGDVVTEAEYRAMLAPLARR
GARAVCTNPDRRMLVPGGTAFGAGRIAELYEEEGGTVDWIGKPHPAIYAHAARLCRVRAERVLCIGDSVEHDIAGARGFG
ADSALVRTGILADAAPAALRAAFVRHGVWPDYVLPGLVW
>Mature_279_residues
MNPRALAGIAALVGHYDVLFVDQFGVLHDGTAPYPGVRDALARLRDAGQRVVLLSNSGRPGPYNAGRLARLGLGPELYET
IVTSGDTALALARSGEIPVRPGMRCLLIDSGGQDTAFCDALGLVVEAEPARADLVLIAGSRGDVVTEAEYRAMLAPLARR
GARAVCTNPDRRMLVPGGTAFGAGRIAELYEEEGGTVDWIGKPHPAIYAHAARLCRVRAERVLCIGDSVEHDIAGARGFG
ADSALVRTGILADAAPAALRAAFVRHGVWPDYVLPGLVW

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29378; Mature: 29378

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPRALAGIAALVGHYDVLFVDQFGVLHDGTAPYPGVRDALARLRDAGQRVVLLSNSGRP
CCCHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCC
GPYNAGRLARLGLGPELYETIVTSGDTALALARSGEIPVRPGMRCLLIDSGGQDTAFCDA
CCCCCCCEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHH
LGLVVEAEPARADLVLIAGSRGDVVTEAEYRAMLAPLARRGARAVCTNPDRRMLVPGGTA
HCEEEECCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCC
FGAGRIAELYEEEGGTVDWIGKPHPAIYAHAARLCRVRAERVLCIGDSVEHDIAGARGFG
CCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHEEEEECCCCCHHCCCCCCCC
ADSALVRTGILADAAPAALRAAFVRHGVWPDYVLPGLVW
CCHHHHHHCCHHCCHHHHHHHHHHHCCCCHHHHCCCCCC
>Mature Secondary Structure
MNPRALAGIAALVGHYDVLFVDQFGVLHDGTAPYPGVRDALARLRDAGQRVVLLSNSGRP
CCCHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCC
GPYNAGRLARLGLGPELYETIVTSGDTALALARSGEIPVRPGMRCLLIDSGGQDTAFCDA
CCCCCCCEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHH
LGLVVEAEPARADLVLIAGSRGDVVTEAEYRAMLAPLARRGARAVCTNPDRRMLVPGGTA
HCEEEECCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCC
FGAGRIAELYEEEGGTVDWIGKPHPAIYAHAARLCRVRAERVLCIGDSVEHDIAGARGFG
CCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHEEEEECCCCCHHCCCCCCCC
ADSALVRTGILADAAPAALRAAFVRHGVWPDYVLPGLVW
CCHHHHHHCCHHCCHHHHHHHHHHHCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA