| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is ydeV [C]
Identifier: 162147285
GI number: 162147285
Start: 1496861
End: 1498135
Strand: Direct
Name: ydeV [C]
Synonym: GDI_1490
Alternate gene names: 162147285
Gene position: 1496861-1498135 (Clockwise)
Preceding gene: 162147284
Following gene: 162147286
Centisome position: 37.95
GC content: 76.71
Gene sequence:
>1275_bases ATGGTTGAGGCCGCGGCGCTGGGGATCGACCTGGGCACGTCGGGCGTGCGCGCGGCGGTGCTGGATGCGCGGGGGAACGT GCTGGCCGTGGAGGGCGCGCGGTTCGCGGCCCTGGGGGCGGCCGATGCGCCGGCCGTCTGGTGGCAGGCGCTGGCCGATA CGCTCGGCACGCTGCGGGCACGGCTGCCGCTGGACGGCGTGCGGTCGGTCACCGTGGACGGTACCTCCGGCACGCTGGTC GCCATCGACCAGGCCGGGTCCGTGATCGGCCCGGCCTCCATGTATCACGCGCGGGCCGCCGATGCCGCCGTGCTGGCGCG GATCGACGACCTGGCGCCCCCCGACAGCCCGGCGCGGGGCGCGGGCTCGCCGCTGGCGCGGGCGGTGGACATGGCGCGTC GTCCCGGCGTACGCGCCATCCTGCACCAGGCCGACTGGATTGCCGGCCGCCTGCGCGGGCGCTTCGGCGCGACCGACGCC AACAACGCGCTCAAGACCGGCGCGGACCCGGACGCGCTGGCCTGGCCGGACTGGGTGGGCGGGGCCGGGCTGGCGCCGGG GCTGCTGCCCGCCATCCACCTGCCGGGCACGCCGCTGGGGCCGGTGGGGGCCGAGGCCGCGGCGCTGGGCCTGCCGCCCG GTGCCGTCGTCCATGCGGGCACGACGGACGGGTGCGCCTCGTTCCTGGCCACGGGGGCCGACCGGGCCGGGGACGCGGTG ACGGCGCTGGGGTCCACCCTGGTGGTCAAGCTGCTGTCGGACGTGAAGGTCGACGCGGCCGCCTACGGCATCTACAGCCA CCGGATCGGCGGCCGGTATCTGGTGGGCGGGGCGTCCAACACCGGGGGGGCGGTCCTGCTGGCGCTGTTCGGCGCCGACC GGCTGGCCGCCCTGACGGCGGCGCTGCGGCCCGACAGGCCGACGGGGCTGGAGTATTATCCGCTGCTGCGCCCGGGCGAA CGCTTCCCGGTCAGCGACCCGGCGTTCCCGCCCCGGCTGGAACCGCGCCCGGCCGATGACGGGGTGTTCTTCCAGGGCGT GCTGGAAGGCATGGCGATGATCGAGGCCACGGGGTACGCCCGGCTGGAACAGTTGGGCGCGACGACGCTGCGCTCGGTCC GCACGGTCGGCGGCGGTGCGGCGAACGCGGGCTGGACCGCCCTGCGCCAGGCCAGGATCGGGGTGCCGTTCTTGCCCAGC GTGTCCGAGGACGCATGCGTGGGCGCGGCGCGTCTGGGTCTGTTCGGGGGCCTGTCCGAGGGGAAGGCGGCATGA
Upstream 100 bases:
>100_bases CGCCGCCTGACCGCCACGGATATCCACGCCCTGACCCATTGGGAGGCGGAGACCTACCGCCAGGCCCTGAACAAAGAGAC CCAGAACAGGACCACCCGCA
Downstream 100 bases:
>100_bases ACCCGCGCGCGCTGGCCGGCATCGCGGCGCTGGTGGGGCACTACGATGTCCTGTTCGTGGATCAGTTCGGCGTCCTGCAT GATGGCACGGCGCCTTATCC
Product: carbohydrate kinase protein
Products: NA
Alternate protein names: Carbohydrate Kinase; Sugar Kinase; Xylulose Kinase; Carbohydrate Kinase FGGY-Like Protein; FGGY Family Sugar Kinase; Carbohydrate Kinase Fggy Family; Carbohydrate Kinase FGGY Family; Carbohydrate Kinase FGGY Family Protein; Carbohydrate Kinase Fggy; FGGY Family Carbohydrate Kinase N- Domain Protein; D-Xylulose Kinase; FGGY Family Carbohydrate Kinase; Carbohydrate Kinase Protein; Pentulose/Hexulose Kinase
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MVEAAALGIDLGTSGVRAAVLDARGNVLAVEGARFAALGAADAPAVWWQALADTLGTLRARLPLDGVRSVTVDGTSGTLV AIDQAGSVIGPASMYHARAADAAVLARIDDLAPPDSPARGAGSPLARAVDMARRPGVRAILHQADWIAGRLRGRFGATDA NNALKTGADPDALAWPDWVGGAGLAPGLLPAIHLPGTPLGPVGAEAAALGLPPGAVVHAGTTDGCASFLATGADRAGDAV TALGSTLVVKLLSDVKVDAAAYGIYSHRIGGRYLVGGASNTGGAVLLALFGADRLAALTAALRPDRPTGLEYYPLLRPGE RFPVSDPAFPPRLEPRPADDGVFFQGVLEGMAMIEATGYARLEQLGATTLRSVRTVGGGAANAGWTALRQARIGVPFLPS VSEDACVGAARLGLFGGLSEGKAA
Sequences:
>Translated_424_residues MVEAAALGIDLGTSGVRAAVLDARGNVLAVEGARFAALGAADAPAVWWQALADTLGTLRARLPLDGVRSVTVDGTSGTLV AIDQAGSVIGPASMYHARAADAAVLARIDDLAPPDSPARGAGSPLARAVDMARRPGVRAILHQADWIAGRLRGRFGATDA NNALKTGADPDALAWPDWVGGAGLAPGLLPAIHLPGTPLGPVGAEAAALGLPPGAVVHAGTTDGCASFLATGADRAGDAV TALGSTLVVKLLSDVKVDAAAYGIYSHRIGGRYLVGGASNTGGAVLLALFGADRLAALTAALRPDRPTGLEYYPLLRPGE RFPVSDPAFPPRLEPRPADDGVFFQGVLEGMAMIEATGYARLEQLGATTLRSVRTVGGGAANAGWTALRQARIGVPFLPS VSEDACVGAARLGLFGGLSEGKAA >Mature_424_residues MVEAAALGIDLGTSGVRAAVLDARGNVLAVEGARFAALGAADAPAVWWQALADTLGTLRARLPLDGVRSVTVDGTSGTLV AIDQAGSVIGPASMYHARAADAAVLARIDDLAPPDSPARGAGSPLARAVDMARRPGVRAILHQADWIAGRLRGRFGATDA NNALKTGADPDALAWPDWVGGAGLAPGLLPAIHLPGTPLGPVGAEAAALGLPPGAVVHAGTTDGCASFLATGADRAGDAV TALGSTLVVKLLSDVKVDAAAYGIYSHRIGGRYLVGGASNTGGAVLLALFGADRLAALTAALRPDRPTGLEYYPLLRPGE RFPVSDPAFPPRLEPRPADDGVFFQGVLEGMAMIEATGYARLEQLGATTLRSVRTVGGGAANAGWTALRQARIGVPFLPS VSEDACVGAARLGLFGGLSEGKAA
Specific function: Unknown
COG id: COG1070
COG function: function code G; Sugar (pentulose and hexulose) kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42694; Mature: 42694
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEAAALGIDLGTSGVRAAVLDARGNVLAVEGARFAALGAADAPAVWWQALADTLGTLRA CCCCEEEEEECCCCCCEEEEEECCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHH RLPLDGVRSVTVDGTSGTLVAIDQAGSVIGPASMYHARAADAAVLARIDDLAPPDSPARG CCCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AGSPLARAVDMARRPGVRAILHQADWIAGRLRGRFGATDANNALKTGADPDALAWPDWVG CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GAGLAPGLLPAIHLPGTPLGPVGAEAAALGLPPGAVVHAGTTDGCASFLATGADRAGDAV CCCCCCCHHHEEECCCCCCCCCCCCHHHCCCCCCCEEECCCCHHHHHHHHCCCCCCCHHH TALGSTLVVKLLSDVKVDAAAYGIYSHRIGGRYLVGGASNTGGAVLLALFGADRLAALTA HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHH ALRPDRPTGLEYYPLLRPGERFPVSDPAFPPRLEPRPADDGVFFQGVLEGMAMIEATGYA HHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RLEQLGATTLRSVRTVGGGAANAGWTALRQARIGVPFLPSVSEDACVGAARLGLFGGLSE HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC GKAA CCCC >Mature Secondary Structure MVEAAALGIDLGTSGVRAAVLDARGNVLAVEGARFAALGAADAPAVWWQALADTLGTLRA CCCCEEEEEECCCCCCEEEEEECCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHH RLPLDGVRSVTVDGTSGTLVAIDQAGSVIGPASMYHARAADAAVLARIDDLAPPDSPARG CCCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AGSPLARAVDMARRPGVRAILHQADWIAGRLRGRFGATDANNALKTGADPDALAWPDWVG CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GAGLAPGLLPAIHLPGTPLGPVGAEAAALGLPPGAVVHAGTTDGCASFLATGADRAGDAV CCCCCCCHHHEEECCCCCCCCCCCCHHHCCCCCCCEEECCCCHHHHHHHHCCCCCCCHHH TALGSTLVVKLLSDVKVDAAAYGIYSHRIGGRYLVGGASNTGGAVLLALFGADRLAALTA HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHH ALRPDRPTGLEYYPLLRPGERFPVSDPAFPPRLEPRPADDGVFFQGVLEGMAMIEATGYA HHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RLEQLGATTLRSVRTVGGGAANAGWTALRQARIGVPFLPSVSEDACVGAARLGLFGGLSE HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC GKAA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA