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The map label for this gene is rfaF [C]

Identifier: 162147242

GI number: 162147242

Start: 1450037

End: 1450939

Strand: Direct

Name: rfaF [C]

Synonym: GDI_1447

Alternate gene names: 162147242

Gene position: 1450037-1450939 (Clockwise)

Preceding gene: 162147241

Following gene: 162147243

Centisome position: 36.76

GC content: 74.75

Gene sequence:

>903_bases
ATGACGCGCATTCTCGTGATCAAGCTGGGTGCGCTGGGCGATCTGGTCCAGGCCTTCGCCCCCTTCGCCGCCATCCGCGC
CCATCATCGTTCTGCCTCCGTCACCCTGCTGACGACCGCCCCGTTCGCGGCCCTGATGCGCGCATCCCCCTGGTTCGACC
GGGTGGAGGTGGATTCGCGCCCGTCCTGGCGAAACCTGCGCGGGCTGGCGGCGCTGCGCCGCACGCTGGTCGGGTACGAC
ATGGTCTACGACCTGCAGACATCCGGCCGGTCGTCGCGCTATTTTCGCCTGGCGGGCCGTCCCGCCTGGTCGGGGATCGC
GGCGGGCGCGGGCTGGCCGCACGACAATCCCCACCGCGATGTCATGCATACCCGTGCCCGCCAGCGCGACCAGTTGCGCC
GTGCCGGCATCGCCCAGGTGCCCGACCCCGACCTGTCCTGGCTGGCGGGGGGCGGGCCGGTCCTGCCCGCGCCCTATGCG
CTGCTGGTGCCGGGCGCTGCCCCGCACCGGCCGGCCAAGCGCTGGCCGGCCGAACGGTTCGGGGCCCTGGCCTGCCGCCT
GCACCAGCGCGGCCTGACGCCGGTGATCGTGGGCACGCAGGCCGAATCCGGCCTGGCCGCCATCATTCGCGCCGCCTGCC
CGGCCGCGCGCGACCTGACGGGCCGGACCGGCCTGCCCGACCTGGCCGGGCTGGCGGCGCGCGCGGCGCTGGCGGTGGGC
AACGATACCGGGCCGATGCACCTGGCCGCCGCCATGGGCTGCCCCGCGACGGTGCTGTTTTCGCGCGACAGCGACCCGTC
CCTGACCGCGCCGCTGGGCCGCGCGCCGGGGCAGGTGCGGGTCCTGCGCGTTGACGATCTGGCCACTCTGAGCGTGGATA
GGGTTGCGGCCTGCCTCGGCTGA

Upstream 100 bases:

>100_bases
ACCAGAATCCGGCCCCTCGGGGCGACGCCGGTTCGTCCCGCCGGTTCATGGTTGGGGCGGCCTTCTTTTCACGCGGGACA
TTCTGGCCTAACGAGAACGC

Downstream 100 bases:

>100_bases
CGCCATTACAGCGACTTCCCTTTGTCTGGAGCATCGACATCATGCCTGCCATCACCCTGCCTGACGGATCCGTTCGCCGC
TTTGACGGTCCGGTGACGGG

Product: glycosyl transferase

Products: NA

Alternate protein names: ADP-Heptose-LPS Heptosyltransferase; Heptosyltransferase Family Protein; Heptosyltransferase I; ADP-Heptose Of LPS Heptosyltransferase; Lipopolysaccharide Heptosyltransferase; Lipopolysaccharide Core Biosynthesis Protein; ADP-Heptose-LPS Heptosyltransferase II; Family 9 Glycosyl Transferase

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTRILVIKLGALGDLVQAFAPFAAIRAHHRSASVTLLTTAPFAALMRASPWFDRVEVDSRPSWRNLRGLAALRRTLVGYD
MVYDLQTSGRSSRYFRLAGRPAWSGIAAGAGWPHDNPHRDVMHTRARQRDQLRRAGIAQVPDPDLSWLAGGGPVLPAPYA
LLVPGAAPHRPAKRWPAERFGALACRLHQRGLTPVIVGTQAESGLAAIIRAACPAARDLTGRTGLPDLAGLAARAALAVG
NDTGPMHLAAAMGCPATVLFSRDSDPSLTAPLGRAPGQVRVLRVDDLATLSVDRVAACLG

Sequences:

>Translated_300_residues
MTRILVIKLGALGDLVQAFAPFAAIRAHHRSASVTLLTTAPFAALMRASPWFDRVEVDSRPSWRNLRGLAALRRTLVGYD
MVYDLQTSGRSSRYFRLAGRPAWSGIAAGAGWPHDNPHRDVMHTRARQRDQLRRAGIAQVPDPDLSWLAGGGPVLPAPYA
LLVPGAAPHRPAKRWPAERFGALACRLHQRGLTPVIVGTQAESGLAAIIRAACPAARDLTGRTGLPDLAGLAARAALAVG
NDTGPMHLAAAMGCPATVLFSRDSDPSLTAPLGRAPGQVRVLRVDDLATLSVDRVAACLG
>Mature_299_residues
TRILVIKLGALGDLVQAFAPFAAIRAHHRSASVTLLTTAPFAALMRASPWFDRVEVDSRPSWRNLRGLAALRRTLVGYDM
VYDLQTSGRSSRYFRLAGRPAWSGIAAGAGWPHDNPHRDVMHTRARQRDQLRRAGIAQVPDPDLSWLAGGGPVLPAPYAL
LVPGAAPHRPAKRWPAERFGALACRLHQRGLTPVIVGTQAESGLAAIIRAACPAARDLTGRTGLPDLAGLAARAALAVGN
DTGPMHLAAAMGCPATVLFSRDSDPSLTAPLGRAPGQVRVLRVDDLATLSVDRVAACLG

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 31860; Mature: 31729

Theoretical pI: Translated: 11.67; Mature: 11.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRILVIKLGALGDLVQAFAPFAAIRAHHRSASVTLLTTAPFAALMRASPWFDRVEVDSR
CCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCEEECCCC
PSWRNLRGLAALRRTLVGYDMVYDLQTSGRSSRYFRLAGRPAWSGIAAGAGWPHDNPHRD
CCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
VMHTRARQRDQLRRAGIAQVPDPDLSWLAGGGPVLPAPYALLVPGAAPHRPAKRWPAERF
HHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCHHCCCHHHH
GALACRLHQRGLTPVIVGTQAESGLAAIIRAACPAARDLTGRTGLPDLAGLAARAALAVG
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHEEC
NDTGPMHLAAAMGCPATVLFSRDSDPSLTAPLGRAPGQVRVLRVDDLATLSVDRVAACLG
CCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TRILVIKLGALGDLVQAFAPFAAIRAHHRSASVTLLTTAPFAALMRASPWFDRVEVDSR
CEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCEEECCCC
PSWRNLRGLAALRRTLVGYDMVYDLQTSGRSSRYFRLAGRPAWSGIAAGAGWPHDNPHRD
CCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
VMHTRARQRDQLRRAGIAQVPDPDLSWLAGGGPVLPAPYALLVPGAAPHRPAKRWPAERF
HHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCHHCCCHHHH
GALACRLHQRGLTPVIVGTQAESGLAAIIRAACPAARDLTGRTGLPDLAGLAARAALAVG
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHEEC
NDTGPMHLAAAMGCPATVLFSRDSDPSLTAPLGRAPGQVRVLRVDDLATLSVDRVAACLG
CCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA