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The map label for this gene is dcd [H]

Identifier: 162147238

GI number: 162147238

Start: 1446363

End: 1446950

Strand: Reverse

Name: dcd [H]

Synonym: GDI_1443

Alternate gene names: 162147238

Gene position: 1446950-1446363 (Counterclockwise)

Preceding gene: 162147239

Following gene: 162147237

Centisome position: 36.69

GC content: 63.27

Gene sequence:

>588_bases
ATGGTCACCCTCCACGCGACGGAAGGATCTTTGATGCCGATTATGCCCGATAGCTGGATCAGACAGCAGGCCCGCGAGGC
CGGGATGATCGAACCGTTCGTCGAGCAGCAGACGCGCGAGGGCGTGATTTCCTACGGCCTGTCCTCGTACGGGTACGACG
CGCGGGTGGCATCGGAATTCAAGATCTTCACCGACGTCGACAACGCCATCGTCGACCCCAAGAACTTCGCGTCCAACAGC
TTCGTCACGCGTGAGGGGCCGGTCTGCATCATTCCACCCAACAGCTTCGCGCTGGCGCACACGGTGGAATATTTCCGCAT
CCCGCGCGACACGCTGGTCGTCTGCCTGGGCAAGTCCACCTATGCCCGCTGCGGCATCATCGTGAACGTCACCCCGCTGG
AGCCCGAATGGGAAGGCCAGGTGACGATCGAGATCAGCAACACCACCCCCCTGCCGGCGCGCATCTACGCCAACGAGGGG
ATCTGCCAGTTCCTGTTCTTCCAGGGCGCGTCGCCGTGCGAGGTCAGCTATGCCGACCGGGCGGGCAAATATATGGGACA
GCGCGGCGTCGCGACCCCACGGATGTAG

Upstream 100 bases:

>100_bases
CCGCGCCGCCCGTCCCGGACGCGGCGGCCGAGGACGGCGCAAAGAGCTGATTGCGGTCGGGCGCGGCCTTCGCTAGTGGT
CGGGGCTGGCAGGGAGGAGG

Downstream 100 bases:

>100_bases
GAGCCCGGCCATGGACCGTTTCATCATTCACGGCGGCCACCGGCTGCGCGGCGACATCGTCATCGGCGGCGCCAAGAACG
CGGCGCTGAAGCTGCTGGTC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVTLHATEGSLMPIMPDSWIRQQAREAGMIEPFVEQQTREGVISYGLSSYGYDARVASEFKIFTDVDNAIVDPKNFASNS
FVTREGPVCIIPPNSFALAHTVEYFRIPRDTLVVCLGKSTYARCGIIVNVTPLEPEWEGQVTIEISNTTPLPARIYANEG
ICQFLFFQGASPCEVSYADRAGKYMGQRGVATPRM

Sequences:

>Translated_195_residues
MVTLHATEGSLMPIMPDSWIRQQAREAGMIEPFVEQQTREGVISYGLSSYGYDARVASEFKIFTDVDNAIVDPKNFASNS
FVTREGPVCIIPPNSFALAHTVEYFRIPRDTLVVCLGKSTYARCGIIVNVTPLEPEWEGQVTIEISNTTPLPARIYANEG
ICQFLFFQGASPCEVSYADRAGKYMGQRGVATPRM
>Mature_195_residues
MVTLHATEGSLMPIMPDSWIRQQAREAGMIEPFVEQQTREGVISYGLSSYGYDARVASEFKIFTDVDNAIVDPKNFASNS
FVTREGPVCIIPPNSFALAHTVEYFRIPRDTLVVCLGKSTYARCGIIVNVTPLEPEWEGQVTIEISNTTPLPARIYANEG
ICQFLFFQGASPCEVSYADRAGKYMGQRGVATPRM

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 21613; Mature: 21613

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLHATEGSLMPIMPDSWIRQQAREAGMIEPFVEQQTREGVISYGLSSYGYDARVASEF
CEEEEECCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCE
KIFTDVDNAIVDPKNFASNSFVTREGPVCIIPPNSFALAHTVEYFRIPRDTLVVCLGKST
EEEECCCCCEECCCCCCCCCEEECCCCEEEECCCCEEHHHHHHHHCCCCCCEEEEECCCC
YARCGIIVNVTPLEPEWEGQVTIEISNTTPLPARIYANEGICQFLFFQGASPCEVSYADR
CCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCEECHHHH
AGKYMGQRGVATPRM
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MVTLHATEGSLMPIMPDSWIRQQAREAGMIEPFVEQQTREGVISYGLSSYGYDARVASEF
CEEEEECCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCE
KIFTDVDNAIVDPKNFASNSFVTREGPVCIIPPNSFALAHTVEYFRIPRDTLVVCLGKST
EEEECCCCCEECCCCCCCCCEEECCCCEEEECCCCEEHHHHHHHHCCCCCCEEEEECCCC
YARCGIIVNVTPLEPEWEGQVTIEISNTTPLPARIYANEGICQFLFFQGASPCEVSYADR
CCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCEECHHHH
AGKYMGQRGVATPRM
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA