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The map label for this gene is ydbC [H]

Identifier: 162147175

GI number: 162147175

Start: 1383918

End: 1384859

Strand: Direct

Name: ydbC [H]

Synonym: GDI_1380

Alternate gene names: 162147175

Gene position: 1383918-1384859 (Clockwise)

Preceding gene: 162147174

Following gene: 162147176

Centisome position: 35.09

GC content: 68.9

Gene sequence:

>942_bases
TTGTTTCGTTCTTTTTTGAAGAAAGAAGAAATCTTCTTCATGCAGGAGGCCCGAATGTCCCACCCAGACGCCCGCCAGGC
GGGACTCTTCTCCATCGGCGGTGACATCCCGGTCGCCCGGATGGGTTTCGGCGCCATGCGCATCACCGGGCGCGGCATCT
GGGGCGACCCGCCGGACCGCGATCGTTCCCTGGCCACCCTGCGGCGCGCGGCGGCGTGCGGCGTCACGCTGATCGACACC
GCCGACAGCTACGGCTCTTGTGTCAGCGAGGACCTGATCCGCGCCGCGCTGCATCCCTATGATGGGCTGACGATCGCGAC
CAAGGGCGGCCACACGCGGCATGGTCCCGATATCTGGCGCCCGGTCGGCAACCCCAATTACCTGCGCCAGTGTGTGCTGA
TGAGCATGCGCCGCCTGGGCGTGGCGCGGATCGACCTGTGGCAGTTGCATCGCGTGGGGCCCGACTGCCCGCCCGAGGCG
CAGTTCGAGGTGATCGCCGCGATGCGCCAGGAAGGGCTGATCCGCCATGTCGGCCTGTCCGAGGTCTCGGTGGACATGAT
CGAACGCGCGGCGCGCTTCTTCCCGGTCGCCACGGTGCAGAACCGCTACAACCTGGTGAACCGCGCGTCCGAGGACGTGC
TGGAATACTGCATCGCGCACGGGATCGGCTTCATTCCCTGGGCGCCGCTGGCGGCGGGCGGGCTGACGCAGGGCCATACC
GCGCTGGCCCGGACGGCGGCCGACCTGCAAGCCACGCCGGGGCAGGTGGCGCTGGCCTGGCTGCTGCGCCGCGCTCCGGT
CATGCTGCCGATCCCCGGCACCGGCAGCCCCGACCATGTGGATGAAAACACCGCCGCCGCCGGGCTGGTGCTGGACGACG
CCACGTTCGCGCAACTGGACAGGGAAGGGCGCGAGGAATGGCACCGGCTGTCGGGTTCCTGA

Upstream 100 bases:

>100_bases
GGGCCGACGCGCATCAATTATGGCCGCATTATCCCGGTGGTGGATTACACCGCGCGGGTTATCGGCCGGATGCTGGGGTG
ACTGCCTCGCCAGTGCCATA

Downstream 100 bases:

>100_bases
GCGCGGGACGAGACGCGGGCGCGCGACAATGCTAGGACACCGCCTATCGTGATGGACCCTCTTGTGCTGGACATTGCTCC
CTTGGACCTCGCCTGTTGGA

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MFRSFLKKEEIFFMQEARMSHPDARQAGLFSIGGDIPVARMGFGAMRITGRGIWGDPPDRDRSLATLRRAAACGVTLIDT
ADSYGSCVSEDLIRAALHPYDGLTIATKGGHTRHGPDIWRPVGNPNYLRQCVLMSMRRLGVARIDLWQLHRVGPDCPPEA
QFEVIAAMRQEGLIRHVGLSEVSVDMIERAARFFPVATVQNRYNLVNRASEDVLEYCIAHGIGFIPWAPLAAGGLTQGHT
ALARTAADLQATPGQVALAWLLRRAPVMLPIPGTGSPDHVDENTAAAGLVLDDATFAQLDREGREEWHRLSGS

Sequences:

>Translated_313_residues
MFRSFLKKEEIFFMQEARMSHPDARQAGLFSIGGDIPVARMGFGAMRITGRGIWGDPPDRDRSLATLRRAAACGVTLIDT
ADSYGSCVSEDLIRAALHPYDGLTIATKGGHTRHGPDIWRPVGNPNYLRQCVLMSMRRLGVARIDLWQLHRVGPDCPPEA
QFEVIAAMRQEGLIRHVGLSEVSVDMIERAARFFPVATVQNRYNLVNRASEDVLEYCIAHGIGFIPWAPLAAGGLTQGHT
ALARTAADLQATPGQVALAWLLRRAPVMLPIPGTGSPDHVDENTAAAGLVLDDATFAQLDREGREEWHRLSGS
>Mature_313_residues
MFRSFLKKEEIFFMQEARMSHPDARQAGLFSIGGDIPVARMGFGAMRITGRGIWGDPPDRDRSLATLRRAAACGVTLIDT
ADSYGSCVSEDLIRAALHPYDGLTIATKGGHTRHGPDIWRPVGNPNYLRQCVLMSMRRLGVARIDLWQLHRVGPDCPPEA
QFEVIAAMRQEGLIRHVGLSEVSVDMIERAARFFPVATVQNRYNLVNRASEDVLEYCIAHGIGFIPWAPLAAGGLTQGHT
ALARTAADLQATPGQVALAWLLRRAPVMLPIPGTGSPDHVDENTAAAGLVLDDATFAQLDREGREEWHRLSGS

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=284, Percent_Identity=40.8450704225352, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI87081735, Length=308, Percent_Identity=28.8961038961039, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788070, Length=319, Percent_Identity=30.0940438871473, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1789375, Length=285, Percent_Identity=27.0175438596491, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1788081, Length=267, Percent_Identity=28.8389513108614, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34255; Mature: 34255

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRSFLKKEEIFFMQEARMSHPDARQAGLFSIGGDIPVARMGFGAMRITGRGIWGDPPDR
CCHHHHHHHHHHHHHHHHCCCCCHHHCCCEECCCCCCHHHHCCCEEEEECCCCCCCCCCC
DRSLATLRRAAACGVTLIDTADSYGSCVSEDLIRAALHPYDGLTIATKGGHTRHGPDIWR
CHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHC
PVGNPNYLRQCVLMSMRRLGVARIDLWQLHRVGPDCPPEAQFEVIAAMRQEGLIRHVGLS
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCHH
EVSVDMIERAARFFPVATVQNRYNLVNRASEDVLEYCIAHGIGFIPWAPLAAGGLTQGHT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHH
ALARTAADLQATPGQVALAWLLRRAPVMLPIPGTGSPDHVDENTAAAGLVLDDATFAQLD
HHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHH
REGREEWHRLSGS
HHHHHHHHHCCCC
>Mature Secondary Structure
MFRSFLKKEEIFFMQEARMSHPDARQAGLFSIGGDIPVARMGFGAMRITGRGIWGDPPDR
CCHHHHHHHHHHHHHHHHCCCCCHHHCCCEECCCCCCHHHHCCCEEEEECCCCCCCCCCC
DRSLATLRRAAACGVTLIDTADSYGSCVSEDLIRAALHPYDGLTIATKGGHTRHGPDIWR
CHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHC
PVGNPNYLRQCVLMSMRRLGVARIDLWQLHRVGPDCPPEAQFEVIAAMRQEGLIRHVGLS
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCHH
EVSVDMIERAARFFPVATVQNRYNLVNRASEDVLEYCIAHGIGFIPWAPLAAGGLTQGHT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHH
ALARTAADLQATPGQVALAWLLRRAPVMLPIPGTGSPDHVDENTAAAGLVLDDATFAQLD
HHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHH
REGREEWHRLSGS
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]