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The map label for this gene is ctaA

Identifier: 162147136

GI number: 162147136

Start: 1340320

End: 1341420

Strand: Reverse

Name: ctaA

Synonym: GDI_1341

Alternate gene names: 162147136

Gene position: 1341420-1340320 (Counterclockwise)

Preceding gene: 162147142

Following gene: 162147131

Centisome position: 34.01

GC content: 67.94

Gene sequence:

>1101_bases
ATGTCCGCACACATGTCCCTGCGTCCGGCCGGCAGCCGCGACGATGCCTCGCCCATCGCGCTTCGCGACCGCAGGCGTAT
CTCGACCTGGCTGTTCGTCATCTGCTTCATGCTGATCGGCCAGATCGCGCTGGGCGGATACACCCGGCTGACCGGTTCGG
GCCTGTCGATCATGGACTGGCGGCCGGTCACCGGCATCATCCCGCCCTTGTCCCACACGGAATGGGAGCGGCAGTTCGCG
CTGTACCAGACCATTCCGCAGTACAAGATCCTGCATGACGGATTCGGGCTGGCCGGGTTCCAGAAGATCTTCTGGGCGGA
ATGGACCCATCGGTTCTGGGCCCGGGTCATGAGCCTGGCGCTGCTGGCGCCGCTGGTCTGGTTCGCCGTGACCGGCGCGC
TGACGCGGGGACTGATCGCGCGGCTGCTGCTGTATTTCGTGCTGGGCGGGCTGCAGGGGGCGATCGGCTGGTTCATGGTC
GCATCGGGCTTCGACCAGAACAGCACGGCGGTCGAGCCGGTGCGGCTGGTCCTGCATCTGGGCTGCGCCTTCGCGCTGTA
TATCGCCATCCTGTGGACCGCGCTGTCGGTCCGCACGCCCCGCGCCGCCTTCATCCCCGCCACGGCGGCGGTGGTGCGGA
CGAAGCGGCTGGTGTGGTGCGCCACGATCCTGATCGGCATCACCATCACCGCTGGCGGCTTTACCGCCGGGACCCACGCG
GGTTTTTCCTACAACACCTTTCCGCTGATGGACGGGCGCCTGATTCCCCATGGCTACGCCCGGCTGTCGCCGTTCTGGCT
GAACTGGTTCGAGAACGTGCCGGCCGTCCAGTTCGACCACCGGCTGCTGGCGACCGTGACCGCGCTGGCCATCGGGGCCT
GCCTGTTCGCGGGCCTGCGCACGCCGCAACTGGGCAAGCCGGCGCAGGACGCGCTGATGCTAATGGGCTGGGCGGTCCTG
ATTCAGTACGCGCTGGGCATCACCACCCTGCTTCTGGTCGTTCCCGCCTGGGCCGGAACCGTGCACCAGACCTGGGCCGC
CGTCCTTCTGACCATCGCCATCGTGACCCTGCACCGGCTTCGCGGCGTCGGCCGCGTCTGA

Upstream 100 bases:

>100_bases
CGAAGCCCTTTTGGAAACCGGCTCGTTTATCGATTGGTGGGGGATGGCCCGCTCTAGCATCCGCTTGCCGTCCGTCGCAA
GGCCGGTCTAAATCCCGATC

Downstream 100 bases:

>100_bases
TCCGGCGGCCACAGGCGCCGGCGCAGGGGGGGCCGGGCCCGACACGGCTGGAACCGGCGCCCCGGACGGGACCGGCTTGT
CCTGCACCGTGGCGGCCGGC

Product: cytochrome c oxidase assembly protein

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MSAHMSLRPAGSRDDASPIALRDRRRISTWLFVICFMLIGQIALGGYTRLTGSGLSIMDWRPVTGIIPPLSHTEWERQFA
LYQTIPQYKILHDGFGLAGFQKIFWAEWTHRFWARVMSLALLAPLVWFAVTGALTRGLIARLLLYFVLGGLQGAIGWFMV
ASGFDQNSTAVEPVRLVLHLGCAFALYIAILWTALSVRTPRAAFIPATAAVVRTKRLVWCATILIGITITAGGFTAGTHA
GFSYNTFPLMDGRLIPHGYARLSPFWLNWFENVPAVQFDHRLLATVTALAIGACLFAGLRTPQLGKPAQDALMLMGWAVL
IQYALGITTLLLVVPAWAGTVHQTWAAVLLTIAIVTLHRLRGVGRV

Sequences:

>Translated_366_residues
MSAHMSLRPAGSRDDASPIALRDRRRISTWLFVICFMLIGQIALGGYTRLTGSGLSIMDWRPVTGIIPPLSHTEWERQFA
LYQTIPQYKILHDGFGLAGFQKIFWAEWTHRFWARVMSLALLAPLVWFAVTGALTRGLIARLLLYFVLGGLQGAIGWFMV
ASGFDQNSTAVEPVRLVLHLGCAFALYIAILWTALSVRTPRAAFIPATAAVVRTKRLVWCATILIGITITAGGFTAGTHA
GFSYNTFPLMDGRLIPHGYARLSPFWLNWFENVPAVQFDHRLLATVTALAIGACLFAGLRTPQLGKPAQDALMLMGWAVL
IQYALGITTLLLVVPAWAGTVHQTWAAVLLTIAIVTLHRLRGVGRV
>Mature_365_residues
SAHMSLRPAGSRDDASPIALRDRRRISTWLFVICFMLIGQIALGGYTRLTGSGLSIMDWRPVTGIIPPLSHTEWERQFAL
YQTIPQYKILHDGFGLAGFQKIFWAEWTHRFWARVMSLALLAPLVWFAVTGALTRGLIARLLLYFVLGGLQGAIGWFMVA
SGFDQNSTAVEPVRLVLHLGCAFALYIAILWTALSVRTPRAAFIPATAAVVRTKRLVWCATILIGITITAGGFTAGTHAG
FSYNTFPLMDGRLIPHGYARLSPFWLNWFENVPAVQFDHRLLATVTALAIGACLFAGLRTPQLGKPAQDALMLMGWAVLI
QYALGITTLLLVVPAWAGTVHQTWAAVLLTIAIVTLHRLRGVGRV

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 2 subfamily

Homologues:

Organism=Homo sapiens, GI17921985, Length=347, Percent_Identity=37.7521613832853, Blast_Score=208, Evalue=7e-54,
Organism=Homo sapiens, GI17921987, Length=317, Percent_Identity=36.9085173501577, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17536069, Length=352, Percent_Identity=35.5113636363636, Blast_Score=187, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6320989, Length=380, Percent_Identity=34.2105263157895, Blast_Score=191, Evalue=1e-49,
Organism=Drosophila melanogaster, GI19922860, Length=355, Percent_Identity=34.3661971830986, Blast_Score=182, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CTAA_GLUDA (A9HEV3)

Other databases:

- EMBL:   AM889285
- EMBL:   CP001189
- RefSeq:   YP_001601597.1
- RefSeq:   YP_002276422.1
- GeneID:   5792100
- GeneID:   6975474
- GenomeReviews:   AM889285_GR
- GenomeReviews:   CP001189_GR
- KEGG:   gdj:Gdia_2047
- HOGENOM:   HBG628966
- OMA:   GLSIVEW
- ProtClustDB:   CLSK2780094
- HAMAP:   MF_01665
- InterPro:   IPR003780

Pfam domain/function: PF02628 COX15-CtaA

EC number: NA

Molecular weight: Translated: 40264; Mature: 40133

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: BINDING 342-342

Signals:

None

Transmembrane regions:

HASH(0x13ec1d24)-; HASH(0x149d19b0)-; HASH(0x14776a50)-; HASH(0x133edddc)-; HASH(0x14f80e74)-; HASH(0x14f73db8)-; HASH(0x146f7f34)-; HASH(0x14f5be78)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHMSLRPAGSRDDASPIALRDRRRISTWLFVICFMLIGQIALGGYTRLTGSGLSIMDW
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEECC
RPVTGIIPPLSHTEWERQFALYQTIPQYKILHDGFGLAGFQKIFWAEWTHRFWARVMSLA
CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLAPLVWFAVTGALTRGLIARLLLYFVLGGLQGAIGWFMVASGFDQNSTAVEPVRLVLHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GCAFALYIAILWTALSVRTPRAAFIPATAAVVRTKRLVWCATILIGITITAGGFTAGTHA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GFSYNTFPLMDGRLIPHGYARLSPFWLNWFENVPAVQFDHRLLATVTALAIGACLFAGLR
CCCCCCCCCCCCEECCCCHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
TPQLGKPAQDALMLMGWAVLIQYALGITTLLLVVPAWAGTVHQTWAAVLLTIAIVTLHRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RGVGRV
HCCCCH
>Mature Secondary Structure 
SAHMSLRPAGSRDDASPIALRDRRRISTWLFVICFMLIGQIALGGYTRLTGSGLSIMDW
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEECC
RPVTGIIPPLSHTEWERQFALYQTIPQYKILHDGFGLAGFQKIFWAEWTHRFWARVMSLA
CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLAPLVWFAVTGALTRGLIARLLLYFVLGGLQGAIGWFMVASGFDQNSTAVEPVRLVLHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GCAFALYIAILWTALSVRTPRAAFIPATAAVVRTKRLVWCATILIGITITAGGFTAGTHA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GFSYNTFPLMDGRLIPHGYARLSPFWLNWFENVPAVQFDHRLLATVTALAIGACLFAGLR
CCCCCCCCCCCCEECCCCHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
TPQLGKPAQDALMLMGWAVLIQYALGITTLLLVVPAWAGTVHQTWAAVLLTIAIVTLHRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RGVGRV
HCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA