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The map label for this gene is arnT [H]

Identifier: 162146970

GI number: 162146970

Start: 1172214

End: 1173872

Strand: Reverse

Name: arnT [H]

Synonym: GDI_1175

Alternate gene names: 162146970

Gene position: 1173872-1172214 (Counterclockwise)

Preceding gene: 162146971

Following gene: 162146969

Centisome position: 29.76

GC content: 70.46

Gene sequence:

>1659_bases
ATGACGCGGCTGACCTTGCGGCATTACGTCATGCTGGCGTTGTGTACGTTCATGATCTTCCTGCCCGGGCGGGCCAGCCT
GCCGCCCCTGGACCGGGACGAGCCGCGCTATATGGAAGCCAGCGCGCAGATGCTGCGCAGCGGCAATTTCATCGATGTCC
GGTTCCAGGACCAGCCGCGCTATCTGCAGCCCGCCGGCATCTACTGGCTGGAGGCCGCCTCGGTCGCCGCCACCGGCACC
CTGCGCCAGCATGCGGTGTGGGCCTATCGCATTCCGTCGCTGCTGGCGGTGACGGCCGTGGTGGTGCTGACGGCCTGGAT
CGGCGCCACCCTGTTCGGTCCGGCCAGCGGTCTGCTGGCGGCGGGACTGCTCGCCGTGTCGGTGCTGACGACGGCCGAGG
GCCGGATGGCCACCATCGACACCACCCTGCTGCTGGCGGTGCTGCTGGCGCAGACGGGGCTCCTGCGCGCCTATCTGGAC
CGTGAACGCGACCGGCCGACGCCGCTTTCGGCCGCGCTGCTGTACTGGACGGCGCTGGGGGTGGGGCTGATGCTCAAGGG
GCCGGTGGTGCTGATCCCGGGCTTCGGCACGCCGCTGGCGCTGGCGCTGGTGGAACGGCGCATCGACTGGTGGCACCGGC
TGCGGCCCGCGTGGGGCTGGGCGGTGATGCTGGCGATCGTCCTGCCCTGGTGCGTCGCGATCGGGGTCGTCAGCCATGGC
GATTTCTTCTCGCGCGCGGTGGGAACCAATTTCCTCGGCAAGGTGGCCCATGGCCAGCAGGCGCACGGCCTGCCGCCCGG
GTATCACCTGCTGGCGTTCGCCATCGCCTTCTGGCCCGGCTCGATCTTCGCGGCGATGGCGCTGCCCTTCGTCTGGGCCC
GGCGGCATGCGCCGCCGGTGCGTTTCCTGCTGTGCTGGATCGTGCCGCACTGGCTGGTGTTCGAAGCCATCGCGACCAAG
CTGCCGCATTACGTGCTGCCCACCTATCCGGCGATCGCGATGCTGACCGCGGCGGCGATCATGACCATGCCCGACCGCTG
GTCATGGCCGGCCGCGCTGTGGGGCCGGGTGGTGCTGGCGGTGTACGGCGTGCTGTGGCTGGTGCTGGGGGTCGCGCTGT
CCGTGGCGGGGCCTGTGCTGCTGTGGCGGCTGGAGCATCGGGTGGAGCCCGCGGCGCTGATCGTGCCGCTGGGCGCGTTG
CCGCTGGTGCTGGTGTCCGCCTGGCTGCTGGTGGGGCGCCAGCCCCTGCGGGCCGCCATGGCGGCGGTCGCGGCGGCGGT
AATCATCCATGTCGGCCTGTTCGTGACCGTGATCCCGAACCTGCAGGCGATCTGGCTCAGTCCGCGCCTGGCCGCGCTGG
TGGACGATTACCGGCCGTGCCCGGATACGATCGTGGCCTCGCCCTCGTTCTCGGAACCCAGCCTGGTGTTCCTGGTGGGG
CAGAATACGGCGCTGGTCGATCCCGTTGCCGCGGCCGACCTGCTGCGCGACAACCGGGCCTGCGGCCTGGCGCTGGTGGA
CCGCCGCGACGAACCGGCCTTTCGCGCGCGCCTGCGGCGGGACGGCCTGAACGTGATCGAATTCGGCCGCGTCGCGGGGC
TGAATTATTCGACGGGCAAGCATCTCGATATCGGGCTGTTTGGACCGACACCCCCATAA

Upstream 100 bases:

>100_bases
AACCGCGCGCTGGTCGGTATCCGCGACCTTCTGGGCGTGATGTGGCTGAACAACCGCACACGGCTTCCCCATCATATCAC
CGAACGCTAGGGCGCGGCGG

Downstream 100 bases:

>100_bases
AAAAGCCGGGCTGTGCCCGGACCCGGCAGGGCATGATGCCCTGCACCCCGAGGATAAGGACCCACGCCGTGACCGGATTG
CTGCGCGTGTTGACAGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MTRLTLRHYVMLALCTFMIFLPGRASLPPLDRDEPRYMEASAQMLRSGNFIDVRFQDQPRYLQPAGIYWLEAASVAATGT
LRQHAVWAYRIPSLLAVTAVVVLTAWIGATLFGPASGLLAAGLLAVSVLTTAEGRMATIDTTLLLAVLLAQTGLLRAYLD
RERDRPTPLSAALLYWTALGVGLMLKGPVVLIPGFGTPLALALVERRIDWWHRLRPAWGWAVMLAIVLPWCVAIGVVSHG
DFFSRAVGTNFLGKVAHGQQAHGLPPGYHLLAFAIAFWPGSIFAAMALPFVWARRHAPPVRFLLCWIVPHWLVFEAIATK
LPHYVLPTYPAIAMLTAAAIMTMPDRWSWPAALWGRVVLAVYGVLWLVLGVALSVAGPVLLWRLEHRVEPAALIVPLGAL
PLVLVSAWLLVGRQPLRAAMAAVAAAVIIHVGLFVTVIPNLQAIWLSPRLAALVDDYRPCPDTIVASPSFSEPSLVFLVG
QNTALVDPVAAADLLRDNRACGLALVDRRDEPAFRARLRRDGLNVIEFGRVAGLNYSTGKHLDIGLFGPTPP

Sequences:

>Translated_552_residues
MTRLTLRHYVMLALCTFMIFLPGRASLPPLDRDEPRYMEASAQMLRSGNFIDVRFQDQPRYLQPAGIYWLEAASVAATGT
LRQHAVWAYRIPSLLAVTAVVVLTAWIGATLFGPASGLLAAGLLAVSVLTTAEGRMATIDTTLLLAVLLAQTGLLRAYLD
RERDRPTPLSAALLYWTALGVGLMLKGPVVLIPGFGTPLALALVERRIDWWHRLRPAWGWAVMLAIVLPWCVAIGVVSHG
DFFSRAVGTNFLGKVAHGQQAHGLPPGYHLLAFAIAFWPGSIFAAMALPFVWARRHAPPVRFLLCWIVPHWLVFEAIATK
LPHYVLPTYPAIAMLTAAAIMTMPDRWSWPAALWGRVVLAVYGVLWLVLGVALSVAGPVLLWRLEHRVEPAALIVPLGAL
PLVLVSAWLLVGRQPLRAAMAAVAAAVIIHVGLFVTVIPNLQAIWLSPRLAALVDDYRPCPDTIVASPSFSEPSLVFLVG
QNTALVDPVAAADLLRDNRACGLALVDRRDEPAFRARLRRDGLNVIEFGRVAGLNYSTGKHLDIGLFGPTPP
>Mature_551_residues
TRLTLRHYVMLALCTFMIFLPGRASLPPLDRDEPRYMEASAQMLRSGNFIDVRFQDQPRYLQPAGIYWLEAASVAATGTL
RQHAVWAYRIPSLLAVTAVVVLTAWIGATLFGPASGLLAAGLLAVSVLTTAEGRMATIDTTLLLAVLLAQTGLLRAYLDR
ERDRPTPLSAALLYWTALGVGLMLKGPVVLIPGFGTPLALALVERRIDWWHRLRPAWGWAVMLAIVLPWCVAIGVVSHGD
FFSRAVGTNFLGKVAHGQQAHGLPPGYHLLAFAIAFWPGSIFAAMALPFVWARRHAPPVRFLLCWIVPHWLVFEAIATKL
PHYVLPTYPAIAMLTAAAIMTMPDRWSWPAALWGRVVLAVYGVLWLVLGVALSVAGPVLLWRLEHRVEPAALIVPLGALP
LVLVSAWLLVGRQPLRAAMAAVAAAVIIHVGLFVTVIPNLQAIWLSPRLAALVDDYRPCPDTIVASPSFSEPSLVFLVGQ
NTALVDPVAAADLLRDNRACGLALVDRRDEPAFRARLRRDGLNVIEFGRVAGLNYSTGKHLDIGLFGPTPP

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 60138; Mature: 60007

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLTLRHYVMLALCTFMIFLPGRASLPPLDRDEPRYMEASAQMLRSGNFIDVRFQDQPR
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCC
YLQPAGIYWLEAASVAATGTLRQHAVWAYRIPSLLAVTAVVVLTAWIGATLFGPASGLLA
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AGLLAVSVLTTAEGRMATIDTTLLLAVLLAQTGLLRAYLDRERDRPTPLSAALLYWTALG
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VGLMLKGPVVLIPGFGTPLALALVERRIDWWHRLRPAWGWAVMLAIVLPWCVAIGVVSHG
HHHEECCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
DFFSRAVGTNFLGKVAHGQQAHGLPPGYHLLAFAIAFWPGSIFAAMALPFVWARRHAPPV
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHH
RFLLCWIVPHWLVFEAIATKLPHYVLPTYPAIAMLTAAAIMTMPDRWSWPAALWGRVVLA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VYGVLWLVLGVALSVAGPVLLWRLEHRVEPAALIVPLGALPLVLVSAWLLVGRQPLRAAM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHH
AAVAAAVIIHVGLFVTVIPNLQAIWLSPRLAALVDDYRPCPDTIVASPSFSEPSLVFLVG
HHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCCEECCCCCCCCCEEEEEE
QNTALVDPVAAADLLRDNRACGLALVDRRDEPAFRARLRRDGLNVIEFGRVAGLNYSTGK
CCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
HLDIGLFGPTPP
EEEEEECCCCCC
>Mature Secondary Structure 
TRLTLRHYVMLALCTFMIFLPGRASLPPLDRDEPRYMEASAQMLRSGNFIDVRFQDQPR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCC
YLQPAGIYWLEAASVAATGTLRQHAVWAYRIPSLLAVTAVVVLTAWIGATLFGPASGLLA
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AGLLAVSVLTTAEGRMATIDTTLLLAVLLAQTGLLRAYLDRERDRPTPLSAALLYWTALG
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VGLMLKGPVVLIPGFGTPLALALVERRIDWWHRLRPAWGWAVMLAIVLPWCVAIGVVSHG
HHHEECCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
DFFSRAVGTNFLGKVAHGQQAHGLPPGYHLLAFAIAFWPGSIFAAMALPFVWARRHAPPV
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHH
RFLLCWIVPHWLVFEAIATKLPHYVLPTYPAIAMLTAAAIMTMPDRWSWPAALWGRVVLA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VYGVLWLVLGVALSVAGPVLLWRLEHRVEPAALIVPLGALPLVLVSAWLLVGRQPLRAAM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHH
AAVAAAVIIHVGLFVTVIPNLQAIWLSPRLAALVDDYRPCPDTIVASPSFSEPSLVFLVG
HHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCCEECCCCCCCCCEEEEEE
QNTALVDPVAAADLLRDNRACGLALVDRRDEPAFRARLRRDGLNVIEFGRVAGLNYSTGK
CCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
HLDIGLFGPTPP
EEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA