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The map label for this gene is 162146877

Identifier: 162146877

GI number: 162146877

Start: 1070425

End: 1070697

Strand: Direct

Name: 162146877

Synonym: GDI_1065

Alternate gene names: NA

Gene position: 1070425-1070697 (Clockwise)

Preceding gene: 162146876

Following gene: 162146878

Centisome position: 27.14

GC content: 61.17

Gene sequence:

>273_bases
ATGATGATGGCGTTCATCGACGCCCATCGCGAGGACTTGGGTATCGAGCCGATCTGCCGCGAACTGGCGATTGCCCCATC
CTCCTATCACGAACATGCTGTCCGTCTGGCGGACCCCGCCAGGCGGCCTGCGCGTGCCCGGCGCGACGACGAACTGAAGG
ACGAGATCAAGCGGGTATATGACGCCAGTTCAAAGCTCTACGGACGCGCAAAGTCTGGCATCAGATGCGCCGTGAAGGCA
TTGAGGTGGCCAAATGCACCGTGGAACGCCTGA

Upstream 100 bases:

>100_bases
AGGAACTTGAGCGCGAGGTCAAGGAGTTGCGCCGCGCCAACGAGATCCTGCGCAAGGCATCGGCGTATTTTGCGATGGCG
GAGCTCGACCGCCGCGGGAA

Downstream 100 bases:

>100_bases
TGCGTGCCATGGGCCTAGCCGGCATTCGGCGAGGGAAGAGGACGGTCACGACCATCAGCAATCCCAAGGCTCCGTGCCCG
CTGGACAAGGTGAACCGCGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MMMAFIDAHREDLGIEPICRELAIAPSSYHEHAVRLADPARRPARARRDDELKDEIKRVYDASSKLYGRAKSGIRCAVKA
LRWPNAPWNA

Sequences:

>Translated_90_residues
MMMAFIDAHREDLGIEPICRELAIAPSSYHEHAVRLADPARRPARARRDDELKDEIKRVYDASSKLYGRAKSGIRCAVKA
LRWPNAPWNA
>Mature_90_residues
MMMAFIDAHREDLGIEPICRELAIAPSSYHEHAVRLADPARRPARARRDDELKDEIKRVYDASSKLYGRAKSGIRCAVKA
LRWPNAPWNA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 10273; Mature: 10273

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMAFIDAHREDLGIEPICRELAIAPSSYHEHAVRLADPARRPARARRDDELKDEIKRVY
CCCHHCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
DASSKLYGRAKSGIRCAVKALRWPNAPWNA
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MMMAFIDAHREDLGIEPICRELAIAPSSYHEHAVRLADPARRPARARRDDELKDEIKRVY
CCCHHCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
DASSKLYGRAKSGIRCAVKALRWPNAPWNA
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]