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The map label for this gene is trbE [H]

Identifier: 162146834

GI number: 162146834

Start: 1030697

End: 1033123

Strand: Reverse

Name: trbE [H]

Synonym: GDI_1016

Alternate gene names: 162146834

Gene position: 1033123-1030697 (Counterclockwise)

Preceding gene: 162146835

Following gene: 162146833

Centisome position: 26.19

GC content: 66.58

Gene sequence:

>2427_bases
ATGCTGAACCTCGCCGAATACCGCCACCGCCGCGACCGGCTGGCCGATTTCCTGCCCTGGGCGGCGCTGGTCGCCAGAGG
CGTGGTGCTGAACAAGGATGGTGCCTTTCAGCGCACCGCCCGCTTTCGCGGCCCGGACCTGGAGTCCTCGACCGCGTCCG
AACTGGTCGCCATCACGTCCCGCCTGAACAACGCGCTGCGGCGGCTTGGCTCCGGCTGGGCCATTTTCGTGGAAGCGCAG
CGTCATCCGGCGCGTGGCTATCCGTCTGGCCCATTCCCCGACCCTGCCTCCGAACTGGTCGACGCCGAACGTCGGGCACA
GTTCGAGGAAGAGGGGGCGCATTATGAGAGCCATTATTTCCTCACCTTGGTCTGGCTGCCACCGGCGGACGATGCTGCCC
GTGCGGAGGCCTGGCTCTATGAGAACCGCGCCCGTGGTGGTTCCGACTGGAAGGCCGTGGTCGCGGGCTTCATCGACCAG
ACTGACCGAGTGCTGGCCTTGCTCGACGGCTTTATGCCCGAGGCCGACTGGCTCGATGACGGCGAAACCCTGACCTATCT
CCACTCCTGCATCTCCACGCGGATGCAGCGGGTCCGGGTGCCTGAAATCCCGATGCACCTCGACGCCATTCTGGTGGATG
AGGAACTGACCGGCGGACTGGAGCCGCGCCTGGGTGACGCCCATCTGCGCACGCTCACCATCACCGGCTTTCCGACCCAG
ACCTGGCCGGGTCTGCTCGACGAGCTGAACCGGCTGGCCTTTCCCTATCGCTGGTCGACGCGGGCGATCTGCCTGGACCG
CACCGATGCGACCAGGGTGCTGGGCCGGATCCGGCGGCAGTGGTTCGCCAAGCGCAAATCGATCATGGCCATCCTCAAGG
AGGTCATGACCAATGAGGCGTCGGTGCTGCTGGATTCCGACGCCGCCAACAAGGCGGCCGACGCCGATGCGGCGTTGCAG
GAACTCGGCACCGACCAGGTCGGACAGGCCTATGTCACCGCCACCGTCACGGTGTGGGACGAGGATCCTGTCATTGCCGC
CGATCGACTGCGGCTGGTGGAGAAGACAATCCAGGGCCGCGATTTCACCTGCATGCGTGAGACGGTGAACGCCATTGAGG
CCTGGTTCGGCAGCCTGCCGGGGCATGTCTACGCCAATGTGCGCCAGCCCTGCGTCTCGACCCTGAACCTGGCGCACATG
ATCCCGCTCTCCGCCGTCTGGGCCGGGCCGGAACGTGACGGACATTTCGCGGCGCCGCCTCTGTTCTATGCCCGCACCGA
GGGTTCGACCCCGTTCCGCTTCGCTCTCCACGTCGGCGATGTCGGCCACACGCTGATCGTCGGGCCGACGGGCGCTGGCA
AGTCCGTGCTGCTGGCCTTCATGGCGATGCAGTTCCGCCGCTACGCCGGTGCCCGGATATTCGCGTTCGATTTCGGCGGC
TCGATCCGTGCGGCCACCCTGGCGATGGGTGGCGACTGGCACGATCTCGGCGGCGCGCTGGCGCAGGACGTGAACGATTC
CGTCGCGTTGCAGCCGTTGGCGCGGATCGACGAGCCGGGCGAACGGGCCTGGGCGGCGGAATGGGTGGCGAGCCTGCTGG
AGCGCGAGGGCGTCACCGTTGCGCCCGACCTCAAGGACCATCTATGGTCGGCGTTGACCTCGCTGGCCTCGGCCCCGGTC
GCGGAACGCACCCTTACCGGCCTGTCGGCGCTGCTCCAGTCGCTGGCCTTGAAGCAGGCCCTTCAACCCTATTGTGTTGG
CGGTCCGTGGGGACAATTGCTCGACGCCGAGCATGAGCGGCTGGGTGTCGCCGATATCCAGGCCTTCGAGATCGAGGGGC
TGATCGGCTCGGGGGCGGCGTCAGCCGTGCTGTCCTATCTGTTCCACCGTATCGAGGACCGGTTTGACGGCAGCCCGACA
CTGCTGATCATCGACGAGGGCTGGCTGGCGCTGGATGACCGCGCCTTTGCCGGACAGTTGCGGGAATGGCTGAAGACGCT
GCGCAAGAAGAACGCCTCCGTCATCTTCGCCACCCAGTCGCTGGCCGATATCGACGCCAGCCCCATCGCGCCGGCGCTGA
TCGAAAGCTGCCCGACACGGGTGTTCCTGCCCAACGACCGGGCGCTGGAGCCGCAGATCACCACGATCTATCGCCGTTTC
GGGCTGAACGACCGCCAGATCGAGATCCTCAGCCGGGCGACGCCCAAGCGCGACTATTACTGCCAGTCCCGTCGTGGCAA
CAGGCTGTTCGACCTTGGCCTGTCCGAAGTGGCGCTGGCTTTCACCGCCGCATCTTCGCCCGACGATCAGGCCGCTATCG
ACCGGATTTTCGCCGGGCATGGGCGCGATGGGTTTGCGGCTGCCTGGCTGGCGCACAAGGGTGTCGAGTGGGCGGTGGAG
ATGCTCAAGCCGGGAGCGGTGCTGTGA

Upstream 100 bases:

>100_bases
CATCTCGCCGCCGTCTATGCGGCCAAACGCGATCCCGCCTTCGTCGACGTGGTACGCCGGCATCTGCGTTATCCCACCCA
TCTGGTCGGATGAGGGCGCC

Downstream 100 bases:

>100_bases
AAAACATACTGACAGTAAAATCAGCTTTCGTATTCGGGGTCGGTCTCGTTCTGCCGGTCGTCGCGAGCGCACCGGCTCAT
GCGCAATGGGCAGTCTATGA

Product: conjugal transfer ATPase TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 808; Mature: 808

Protein sequence:

>808_residues
MLNLAEYRHRRDRLADFLPWAALVARGVVLNKDGAFQRTARFRGPDLESSTASELVAITSRLNNALRRLGSGWAIFVEAQ
RHPARGYPSGPFPDPASELVDAERRAQFEEEGAHYESHYFLTLVWLPPADDAARAEAWLYENRARGGSDWKAVVAGFIDQ
TDRVLALLDGFMPEADWLDDGETLTYLHSCISTRMQRVRVPEIPMHLDAILVDEELTGGLEPRLGDAHLRTLTITGFPTQ
TWPGLLDELNRLAFPYRWSTRAICLDRTDATRVLGRIRRQWFAKRKSIMAILKEVMTNEASVLLDSDAANKAADADAALQ
ELGTDQVGQAYVTATVTVWDEDPVIAADRLRLVEKTIQGRDFTCMRETVNAIEAWFGSLPGHVYANVRQPCVSTLNLAHM
IPLSAVWAGPERDGHFAAPPLFYARTEGSTPFRFALHVGDVGHTLIVGPTGAGKSVLLAFMAMQFRRYAGARIFAFDFGG
SIRAATLAMGGDWHDLGGALAQDVNDSVALQPLARIDEPGERAWAAEWVASLLEREGVTVAPDLKDHLWSALTSLASAPV
AERTLTGLSALLQSLALKQALQPYCVGGPWGQLLDAEHERLGVADIQAFEIEGLIGSGAASAVLSYLFHRIEDRFDGSPT
LLIIDEGWLALDDRAFAGQLREWLKTLRKKNASVIFATQSLADIDASPIAPALIESCPTRVFLPNDRALEPQITTIYRRF
GLNDRQIEILSRATPKRDYYCQSRRGNRLFDLGLSEVALAFTAASSPDDQAAIDRIFAGHGRDGFAAAWLAHKGVEWAVE
MLKPGAVL

Sequences:

>Translated_808_residues
MLNLAEYRHRRDRLADFLPWAALVARGVVLNKDGAFQRTARFRGPDLESSTASELVAITSRLNNALRRLGSGWAIFVEAQ
RHPARGYPSGPFPDPASELVDAERRAQFEEEGAHYESHYFLTLVWLPPADDAARAEAWLYENRARGGSDWKAVVAGFIDQ
TDRVLALLDGFMPEADWLDDGETLTYLHSCISTRMQRVRVPEIPMHLDAILVDEELTGGLEPRLGDAHLRTLTITGFPTQ
TWPGLLDELNRLAFPYRWSTRAICLDRTDATRVLGRIRRQWFAKRKSIMAILKEVMTNEASVLLDSDAANKAADADAALQ
ELGTDQVGQAYVTATVTVWDEDPVIAADRLRLVEKTIQGRDFTCMRETVNAIEAWFGSLPGHVYANVRQPCVSTLNLAHM
IPLSAVWAGPERDGHFAAPPLFYARTEGSTPFRFALHVGDVGHTLIVGPTGAGKSVLLAFMAMQFRRYAGARIFAFDFGG
SIRAATLAMGGDWHDLGGALAQDVNDSVALQPLARIDEPGERAWAAEWVASLLEREGVTVAPDLKDHLWSALTSLASAPV
AERTLTGLSALLQSLALKQALQPYCVGGPWGQLLDAEHERLGVADIQAFEIEGLIGSGAASAVLSYLFHRIEDRFDGSPT
LLIIDEGWLALDDRAFAGQLREWLKTLRKKNASVIFATQSLADIDASPIAPALIESCPTRVFLPNDRALEPQITTIYRRF
GLNDRQIEILSRATPKRDYYCQSRRGNRLFDLGLSEVALAFTAASSPDDQAAIDRIFAGHGRDGFAAAWLAHKGVEWAVE
MLKPGAVL
>Mature_808_residues
MLNLAEYRHRRDRLADFLPWAALVARGVVLNKDGAFQRTARFRGPDLESSTASELVAITSRLNNALRRLGSGWAIFVEAQ
RHPARGYPSGPFPDPASELVDAERRAQFEEEGAHYESHYFLTLVWLPPADDAARAEAWLYENRARGGSDWKAVVAGFIDQ
TDRVLALLDGFMPEADWLDDGETLTYLHSCISTRMQRVRVPEIPMHLDAILVDEELTGGLEPRLGDAHLRTLTITGFPTQ
TWPGLLDELNRLAFPYRWSTRAICLDRTDATRVLGRIRRQWFAKRKSIMAILKEVMTNEASVLLDSDAANKAADADAALQ
ELGTDQVGQAYVTATVTVWDEDPVIAADRLRLVEKTIQGRDFTCMRETVNAIEAWFGSLPGHVYANVRQPCVSTLNLAHM
IPLSAVWAGPERDGHFAAPPLFYARTEGSTPFRFALHVGDVGHTLIVGPTGAGKSVLLAFMAMQFRRYAGARIFAFDFGG
SIRAATLAMGGDWHDLGGALAQDVNDSVALQPLARIDEPGERAWAAEWVASLLEREGVTVAPDLKDHLWSALTSLASAPV
AERTLTGLSALLQSLALKQALQPYCVGGPWGQLLDAEHERLGVADIQAFEIEGLIGSGAASAVLSYLFHRIEDRFDGSPT
LLIIDEGWLALDDRAFAGQLREWLKTLRKKNASVIFATQSLADIDASPIAPALIESCPTRVFLPNDRALEPQITTIYRRF
GLNDRQIEILSRATPKRDYYCQSRRGNRLFDLGLSEVALAFTAASSPDDQAAIDRIFAGHGRDGFAAAWLAHKGVEWAVE
MLKPGAVL

Specific function: Required For The Assembly Of Mature F-Pilin Subunits Into Extended F Pili. [C]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 88996; Mature: 88996

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLAEYRHRRDRLADFLPWAALVARGVVLNKDGAFQRTARFRGPDLESSTASELVAITS
CCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHH
RLNNALRRLGSGWAIFVEAQRHPARGYPSGPFPDPASELVDAERRAQFEEEGAHYESHYF
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
LTLVWLPPADDAARAEAWLYENRARGGSDWKAVVAGFIDQTDRVLALLDGFMPEADWLDD
EEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC
GETLTYLHSCISTRMQRVRVPEIPMHLDAILVDEELTGGLEPRLGDAHLRTLTITGFPTQ
CHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEECHHHCCCCCCCCCCCEEEEEEEECCCCC
TWPGLLDELNRLAFPYRWSTRAICLDRTDATRVLGRIRRQWFAKRKSIMAILKEVMTNEA
CCHHHHHHHHHHCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLLDSDAANKAADADAALQELGTDQVGQAYVTATVTVWDEDPVIAADRLRLVEKTIQGR
EEEEECCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCC
DFTCMRETVNAIEAWFGSLPGHVYANVRQPCVSTLNLAHMIPLSAVWAGPERDGHFAAPP
CCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC
LFYARTEGSTPFRFALHVGDVGHTLIVGPTGAGKSVLLAFMAMQFRRYAGARIFAFDFGG
EEEEECCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
SIRAATLAMGGDWHDLGGALAQDVNDSVALQPLARIDEPGERAWAAEWVASLLEREGVTV
CCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEE
APDLKDHLWSALTSLASAPVAERTLTGLSALLQSLALKQALQPYCVGGPWGQLLDAEHER
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHCCHHHH
LGVADIQAFEIEGLIGSGAASAVLSYLFHRIEDRFDGSPTLLIIDEGWLALDDRAFAGQL
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCHHHHHHH
REWLKTLRKKNASVIFATQSLADIDASPIAPALIESCPTRVFLPNDRALEPQITTIYRRF
HHHHHHHHHCCCEEEEEECHHHCCCCCCCCHHHHHHCCCEEECCCCCCCCCHHHHHHHHH
GLNDRQIEILSRATPKRDYYCQSRRGNRLFDLGLSEVALAFTAASSPDDQAAIDRIFAGH
CCCCCHHHHHHHCCCCCCCEECCCCCCEEEECCHHHHHHHHEECCCCCHHHHHHHHHHCC
GRDGFAAAWLAHKGVEWAVEMLKPGAVL
CCCCHHHHHHHHCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MLNLAEYRHRRDRLADFLPWAALVARGVVLNKDGAFQRTARFRGPDLESSTASELVAITS
CCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHH
RLNNALRRLGSGWAIFVEAQRHPARGYPSGPFPDPASELVDAERRAQFEEEGAHYESHYF
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
LTLVWLPPADDAARAEAWLYENRARGGSDWKAVVAGFIDQTDRVLALLDGFMPEADWLDD
EEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC
GETLTYLHSCISTRMQRVRVPEIPMHLDAILVDEELTGGLEPRLGDAHLRTLTITGFPTQ
CHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEECHHHCCCCCCCCCCCEEEEEEEECCCCC
TWPGLLDELNRLAFPYRWSTRAICLDRTDATRVLGRIRRQWFAKRKSIMAILKEVMTNEA
CCHHHHHHHHHHCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLLDSDAANKAADADAALQELGTDQVGQAYVTATVTVWDEDPVIAADRLRLVEKTIQGR
EEEEECCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCC
DFTCMRETVNAIEAWFGSLPGHVYANVRQPCVSTLNLAHMIPLSAVWAGPERDGHFAAPP
CCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCC
LFYARTEGSTPFRFALHVGDVGHTLIVGPTGAGKSVLLAFMAMQFRRYAGARIFAFDFGG
EEEEECCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
SIRAATLAMGGDWHDLGGALAQDVNDSVALQPLARIDEPGERAWAAEWVASLLEREGVTV
CCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEE
APDLKDHLWSALTSLASAPVAERTLTGLSALLQSLALKQALQPYCVGGPWGQLLDAEHER
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHCCHHHH
LGVADIQAFEIEGLIGSGAASAVLSYLFHRIEDRFDGSPTLLIIDEGWLALDDRAFAGQL
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCHHHHHHH
REWLKTLRKKNASVIFATQSLADIDASPIAPALIESCPTRVFLPNDRALEPQITTIYRRF
HHHHHHHHHCCCEEEEEECHHHCCCCCCCCHHHHHHCCCEEECCCCCCCCCHHHHHHHHH
GLNDRQIEILSRATPKRDYYCQSRRGNRLFDLGLSEVALAFTAASSPDDQAAIDRIFAGH
CCCCCHHHHHHHCCCCCCCEECCCCCCEEEECCHHHHHHHHEECCCCCHHHHHHHHHHCC
GRDGFAAAWLAHKGVEWAVEMLKPGAVL
CCCCHHHHHHHHCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]