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The map label for this gene is trbJ

Identifier: 162146833

GI number: 162146833

Start: 1029954

End: 1030700

Strand: Reverse

Name: trbJ

Synonym: GDI_1015

Alternate gene names: NA

Gene position: 1030700-1029954 (Counterclockwise)

Preceding gene: 162146834

Following gene: 162146832

Centisome position: 26.13

GC content: 63.59

Gene sequence:

>747_bases
GTGAAAAACATACTGACAGTAAAATCAGCTTTCGTATTCGGGGTCGGTCTCGTTCTGCCGGTCGTCGCGAGCGCACCGGC
TCATGCGCAATGGGCAGTCTATGACGCGGCCAATCATGTGCAGAATGTTCTCACCGCCGCCAGGGAATTGCAGCAGGTCA
ACCAGCAGGCGCAGAGCCTGCTCAATGAGGCGACCATGCTGGAGAACCAGGCCCGCAATCTCGCCAATCTGCCGTTCTCC
GTGTTGGCCCCGCTGGAACAGTCGATCGCCCAGACTCAACAGATCGTCGGTCAGGCCCAAGGGCTTTCCTACAACCTGTC
CAGCATCGATCAGGCCTTCACCCAGACCTATCCCCAGGCGCTGGGTAGTCCGACCTCAGTGGCGCAGATGACCGCCGATG
CGCAGACCCGATGGCTGAACGCGCGGGGCGGTTATCAGGACGGGCTGCGCGTGCAGGCCGGCGCGGTGCAGAATCTCGAT
GCCACGCGCAGCCAGATCGACAGTCTGGTCACGTCCAGCCAGTCCGCGACCGGCGCCCTGCAGGCCGCGCAATCGGGCAA
CCAACTCACCGCGCTGCAGACGCGCCAGCTTGCCGACCTTACGGCTGTCGTCACGGCGATGGGCCGCGCCCAGGCGCTGG
ACGGCGCGCGTCAGGTCGAGAGCGAGGAGCAGGGCAGGGCGCAACTGGCGAATTTTCTCAATTATGGTGCCGGCTATACC
CCCGGAACCGCGCAGATGTTCCACTGA

Upstream 100 bases:

>100_bases
GGATTTTCGCCGGGCATGGGCGCGATGGGTTTGCGGCTGCCTGGCTGGCGCACAAGGGTGTCGAGTGGGCGGTGGAGATG
CTCAAGCCGGGAGCGGTGCT

Downstream 100 bases:

>100_bases
TGCGCGCGCCGCGCCTCTCCCCGCCGCTCGTCTTCCGGCTCGTTGCCGTTGGGCTGGTCGTGCTGATCCTGGTTGCTGCT
AGCCTGCATCTCCGGCACGT

Product: conjugal transfer protein TrbJ

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbJ; Conjugal Transfer TrbJ Signal Peptide Protein; Conjugal Transfer Protein Trbj; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbj; Conjugative Transfer Protein TrbJ

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKNILTVKSAFVFGVGLVLPVVASAPAHAQWAVYDAANHVQNVLTAARELQQVNQQAQSLLNEATMLENQARNLANLPFS
VLAPLEQSIAQTQQIVGQAQGLSYNLSSIDQAFTQTYPQALGSPTSVAQMTADAQTRWLNARGGYQDGLRVQAGAVQNLD
ATRSQIDSLVTSSQSATGALQAAQSGNQLTALQTRQLADLTAVVTAMGRAQALDGARQVESEEQGRAQLANFLNYGAGYT
PGTAQMFH

Sequences:

>Translated_248_residues
MKNILTVKSAFVFGVGLVLPVVASAPAHAQWAVYDAANHVQNVLTAARELQQVNQQAQSLLNEATMLENQARNLANLPFS
VLAPLEQSIAQTQQIVGQAQGLSYNLSSIDQAFTQTYPQALGSPTSVAQMTADAQTRWLNARGGYQDGLRVQAGAVQNLD
ATRSQIDSLVTSSQSATGALQAAQSGNQLTALQTRQLADLTAVVTAMGRAQALDGARQVESEEQGRAQLANFLNYGAGYT
PGTAQMFH
>Mature_248_residues
MKNILTVKSAFVFGVGLVLPVVASAPAHAQWAVYDAANHVQNVLTAARELQQVNQQAQSLLNEATMLENQARNLANLPFS
VLAPLEQSIAQTQQIVGQAQGLSYNLSSIDQAFTQTYPQALGSPTSVAQMTADAQTRWLNARGGYQDGLRVQAGAVQNLD
ATRSQIDSLVTSSQSATGALQAAQSGNQLTALQTRQLADLTAVVTAMGRAQALDGARQVESEEQGRAQLANFLNYGAGYT
PGTAQMFH

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26286; Mature: 26286

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCC
>Mature Secondary Structure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CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA