| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is engD [H]
Identifier: 162146759
GI number: 162146759
Start: 952002
End: 953096
Strand: Direct
Name: engD [H]
Synonym: GDI_0937
Alternate gene names: 162146759
Gene position: 952002-953096 (Clockwise)
Preceding gene: 162146758
Following gene: 162146761
Centisome position: 24.14
GC content: 67.21
Gene sequence:
>1095_bases ATGGGGTTCAATTGCGGCATCGTGGGCCTGCCGAATGTCGGCAAGTCCACTCTGTTCAACGCCCTGACCGAAACCGCGTC GGCCCAGGCCGCGAACTATCCGTTCTGCACGATCGAACCGAATGTCGGCCGCGTGGCGGTGCCCGACCCGCGACTGCAGG CCCTGGCCGCCATCGGCAAGTCGCAGAAGATCCTGCCGACCAGCCTGGAATTCGTCGATATCGCGGGCCTGGTGCGCGGC GCCTCGCGCGGCGAGGGACTGGGCAACCAGTTCCTGGCGAATATCCGCGAGGTCGATGCGATCATCCACGTCCTGCGCTG TTTCGAGGATGACGACATCACCCATGTCGAAGGCGGGATCGATCCGATCCGCGACGCCGAGATCATCGAGACCGAACTGA TGCTGGCGGACCTGGATTCGCTGGAAAAGCGCATCGTCGCCCTGCAGAAGAAGGCCAAGGGCAACGACCGCGACGCCGCC GCCCAGGTCGCGCTGATGGAACCGCTGATCGCGGTCCTGCGCGAGGGCCGGCCCGCCCGCCAGGCCATTCCCGCCGGGCA GGAAGAGGCCGTGCGCCGCCTGCAGCTGATGACCAGCAAGCCGGTCCTGTATGTCTGCAATGTCGAGGAAGCCTCGGCCG CCACCGGCAATGAATGGTCCGAACGCGTCCGGGCCCGGGCCGAGGCCGAGGGCGCGGTCGCCGTCGTGGTCTCCGCCGCG ATCGAGGCCGAGGTCAGCCAGCTCGGCCCCGAGGACCGCAAGGAATTCCTCGACGGGCTGGGCCTGTCCGACAGCGGCCT GGACCGGGTGATCGCCGCGGGCTACCGCCTGCTGGGCCTGCGGACCTATTTCACCGTGGGGCCCAAGGAAACCCGTGCCT GGACGATCACCGCCGGCACCCGCGCGCCCCAGGCCGCCGCCGTGATCCATAATGATTTCGAACGCGGCTTCATCGCCTGC GAAACCGTCGCCTATGACGACTACATTCGCTACCAGGGCGAAGCGGGCGCCAAGGAAGCCGGCAAGCTGCGGATCGAAGG CCGCGACTATGTCGTGCAGGATGGCGACGTCCTCCTCTTCCGCTTCAACGTCTGA
Upstream 100 bases:
>100_bases GCATGCTCGACGCCATGTCCGACACGGCGCCGGTCCTGGCGGACGGGCAGCCCGAACTGTTCATGACGAAGATGGCCTTG CTGGCCGGGGAGAAGGGCTG
Downstream 100 bases:
>100_bases AAAAGGGGCTGGAGACGCGCCCTGTCGGCGATCCGACGCGCGTTTCCTGCGCTCCGGTGCTCACGGCCATCAAGGCCGCT CTGCTCCGGCGCTCGGAAAC
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MGFNCGIVGLPNVGKSTLFNALTETASAQAANYPFCTIEPNVGRVAVPDPRLQALAAIGKSQKILPTSLEFVDIAGLVRG ASRGEGLGNQFLANIREVDAIIHVLRCFEDDDITHVEGGIDPIRDAEIIETELMLADLDSLEKRIVALQKKAKGNDRDAA AQVALMEPLIAVLREGRPARQAIPAGQEEAVRRLQLMTSKPVLYVCNVEEASAATGNEWSERVRARAEAEGAVAVVVSAA IEAEVSQLGPEDRKEFLDGLGLSDSGLDRVIAAGYRLLGLRTYFTVGPKETRAWTITAGTRAPQAAAVIHNDFERGFIAC ETVAYDDYIRYQGEAGAKEAGKLRIEGRDYVVQDGDVLLFRFNV
Sequences:
>Translated_364_residues MGFNCGIVGLPNVGKSTLFNALTETASAQAANYPFCTIEPNVGRVAVPDPRLQALAAIGKSQKILPTSLEFVDIAGLVRG ASRGEGLGNQFLANIREVDAIIHVLRCFEDDDITHVEGGIDPIRDAEIIETELMLADLDSLEKRIVALQKKAKGNDRDAA AQVALMEPLIAVLREGRPARQAIPAGQEEAVRRLQLMTSKPVLYVCNVEEASAATGNEWSERVRARAEAEGAVAVVVSAA IEAEVSQLGPEDRKEFLDGLGLSDSGLDRVIAAGYRLLGLRTYFTVGPKETRAWTITAGTRAPQAAAVIHNDFERGFIAC ETVAYDDYIRYQGEAGAKEAGKLRIEGRDYVVQDGDVLLFRFNV >Mature_363_residues GFNCGIVGLPNVGKSTLFNALTETASAQAANYPFCTIEPNVGRVAVPDPRLQALAAIGKSQKILPTSLEFVDIAGLVRGA SRGEGLGNQFLANIREVDAIIHVLRCFEDDDITHVEGGIDPIRDAEIIETELMLADLDSLEKRIVALQKKAKGNDRDAAA QVALMEPLIAVLREGRPARQAIPAGQEEAVRRLQLMTSKPVLYVCNVEEASAATGNEWSERVRARAEAEGAVAVVVSAAI EAEVSQLGPEDRKEFLDGLGLSDSGLDRVIAAGYRLLGLRTYFTVGPKETRAWTITAGTRAPQAAAVIHNDFERGFIACE TVAYDDYIRYQGEAGAKEAGKLRIEGRDYVVQDGDVLLFRFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=366, Percent_Identity=43.7158469945355, Blast_Score=306, Evalue=2e-83, Organism=Homo sapiens, GI58761502, Length=233, Percent_Identity=34.7639484978541, Blast_Score=150, Evalue=2e-36, Organism=Escherichia coli, GI1787454, Length=365, Percent_Identity=57.8082191780822, Blast_Score=428, Evalue=1e-121, Organism=Escherichia coli, GI1789574, Length=130, Percent_Identity=32.3076923076923, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17509631, Length=363, Percent_Identity=42.1487603305785, Blast_Score=296, Evalue=1e-80, Organism=Saccharomyces cerevisiae, GI6319499, Length=370, Percent_Identity=40.5405405405405, Blast_Score=270, Evalue=3e-73, Organism=Saccharomyces cerevisiae, GI6321773, Length=381, Percent_Identity=35.4330708661417, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6321649, Length=161, Percent_Identity=36.6459627329193, Blast_Score=87, Evalue=4e-18, Organism=Drosophila melanogaster, GI24640873, Length=364, Percent_Identity=43.4065934065934, Blast_Score=296, Evalue=1e-80, Organism=Drosophila melanogaster, GI24640877, Length=364, Percent_Identity=43.4065934065934, Blast_Score=296, Evalue=1e-80, Organism=Drosophila melanogaster, GI24640875, Length=364, Percent_Identity=43.4065934065934, Blast_Score=296, Evalue=1e-80, Organism=Drosophila melanogaster, GI24640879, Length=326, Percent_Identity=40.4907975460123, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24585318, Length=174, Percent_Identity=29.3103448275862, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 39294; Mature: 39163
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFNCGIVGLPNVGKSTLFNALTETASAQAANYPFCTIEPNVGRVAVPDPRLQALAAIGK CCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCHHHHHHHHHCC SQKILPTSLEFVDIAGLVRGASRGEGLGNQFLANIREVDAIIHVLRCFEDDDITHVEGGI CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC DPIRDAEIIETELMLADLDSLEKRIVALQKKAKGNDRDAAAQVALMEPLIAVLREGRPAR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHH QAIPAGQEEAVRRLQLMTSKPVLYVCNVEEASAATGNEWSERVRARAEAEGAVAVVVSAA HHCCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCHHHHHHHHHHHCCCCCEEEEHHHH IEAEVSQLGPEDRKEFLDGLGLSDSGLDRVIAAGYRLLGLRTYFTVGPKETRAWTITAGT HHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEEEEEECCCCCEEEEEEECC RAPQAAAVIHNDFERGFIACETVAYDDYIRYQGEAGAKEAGKLRIEGRDYVVQDGDVLLF CCCCHHHHHHCCCCCCEEEEEEEEECHHHEECCCCCCCCCCEEEECCCEEEEECCCEEEE RFNV EECC >Mature Secondary Structure GFNCGIVGLPNVGKSTLFNALTETASAQAANYPFCTIEPNVGRVAVPDPRLQALAAIGK CCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCHHHHHHHHHCC SQKILPTSLEFVDIAGLVRGASRGEGLGNQFLANIREVDAIIHVLRCFEDDDITHVEGGI CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC DPIRDAEIIETELMLADLDSLEKRIVALQKKAKGNDRDAAAQVALMEPLIAVLREGRPAR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHH QAIPAGQEEAVRRLQLMTSKPVLYVCNVEEASAATGNEWSERVRARAEAEGAVAVVVSAA HHCCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCHHHHHHHHHHHCCCCCEEEEHHHH IEAEVSQLGPEDRKEFLDGLGLSDSGLDRVIAAGYRLLGLRTYFTVGPKETRAWTITAGT HHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEEEEEECCCCCEEEEEEECC RAPQAAAVIHNDFERGFIACETVAYDDYIRYQGEAGAKEAGKLRIEGRDYVVQDGDVLLF CCCCHHHHHHCCCCCCEEEEEEEEECHHHEECCCCCCCCCCEEEECCCEEEEECCCEEEE RFNV EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA