| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is rimJ [H]
Identifier: 162146644
GI number: 162146644
Start: 840510
End: 841016
Strand: Direct
Name: rimJ [H]
Synonym: GDI_0822
Alternate gene names: 162146644
Gene position: 840510-841016 (Clockwise)
Preceding gene: 162146643
Following gene: 162146646
Centisome position: 21.31
GC content: 63.12
Gene sequence:
>507_bases ATGACGGACGTGTTCGTGCGCCGGGTCATGCGGGCGGATGCCCCCGACCTGATCCGCGCCAATATCGACAATCGCGATTA CCATGCGCCCTGGGTGAATCCCTTCATCGATCAGGGTGGATTCGATTCCTGGTTCGCCGGTCTGGTGACCGGTCCGGATG TCGGCCTGCTGGCGCGGCACGATTTCACGGGTGAAATCGTGGGCGTGTTCAGGTTCAGCCAGATCGTGATGGGCGCCTTT TGCAGTGCTTATCTGGGATATTACGGCATGCGCGCCCATGCCCGTACCGGCCGGATGGCCCGCGCGCTGCGCCTGGTGCT GGAATATGGTTTTGACGAGCTGGGCCTGCATCGTGTCGAGGCCAATATCCAGCCCGGGAACATGGCCTCGATCGCCCTTG TCCGGCGGGCGGGATTTCGCAGGGAGGGATTTTCTCCCCGCTACCTGAAGATCGATGGCGCGTGGCGCGATCACGAACGC TGGGCCTGTCTGGCCGACGACCGGTAG
Upstream 100 bases:
>100_bases TTGTCCTGTTCCCCCTCTCCGTCGTCTTCTGTCTTCTCGCGACCGGTATGGGGGTGATCGGCTTCGGGCAGGGCCACGGG CAGGATGGCGGGGCGCCGGT
Downstream 100 bases:
>100_bases GACAGGTCCCGTTTCATTCCGTTCTGCCCCGCGTCCGCCGGCAGGGCGGGCGCGGGGCAGGGGGAGGAGGGCGGCCTACC GGATGGCCGCCGTGGTCTCG
Product: ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTDVFVRRVMRADAPDLIRANIDNRDYHAPWVNPFIDQGGFDSWFAGLVTGPDVGLLARHDFTGEIVGVFRFSQIVMGAF CSAYLGYYGMRAHARTGRMARALRLVLEYGFDELGLHRVEANIQPGNMASIALVRRAGFRREGFSPRYLKIDGAWRDHER WACLADDR
Sequences:
>Translated_168_residues MTDVFVRRVMRADAPDLIRANIDNRDYHAPWVNPFIDQGGFDSWFAGLVTGPDVGLLARHDFTGEIVGVFRFSQIVMGAF CSAYLGYYGMRAHARTGRMARALRLVLEYGFDELGLHRVEANIQPGNMASIALVRRAGFRREGFSPRYLKIDGAWRDHER WACLADDR >Mature_167_residues TDVFVRRVMRADAPDLIRANIDNRDYHAPWVNPFIDQGGFDSWFAGLVTGPDVGLLARHDFTGEIVGVFRFSQIVMGAFC SAYLGYYGMRAHARTGRMARALRLVLEYGFDELGLHRVEANIQPGNMASIALVRRAGFRREGFSPRYLKIDGAWRDHERW ACLADDR
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5 [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787305, Length=184, Percent_Identity=32.6086956521739, Blast_Score=75, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 19098; Mature: 18967
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVFVRRVMRADAPDLIRANIDNRDYHAPWVNPFIDQGGFDSWFAGLVTGPDVGLLARH CCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCCCEEEEC DFTGEIVGVFRFSQIVMGAFCSAYLGYYGMRAHARTGRMARALRLVLEYGFDELGLHRVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHCEEEEE ANIQPGNMASIALVRRAGFRREGFSPRYLKIDGAWRDHERWACLADDR CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEECCCC >Mature Secondary Structure TDVFVRRVMRADAPDLIRANIDNRDYHAPWVNPFIDQGGFDSWFAGLVTGPDVGLLARH CHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCCCEEEEC DFTGEIVGVFRFSQIVMGAFCSAYLGYYGMRAHARTGRMARALRLVLEYGFDELGLHRVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHCEEEEE ANIQPGNMASIALVRRAGFRREGFSPRYLKIDGAWRDHERWACLADDR CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]