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The map label for this gene is ydfC [H]

Identifier: 162146646

GI number: 162146646

Start: 843535

End: 844422

Strand: Direct

Name: ydfC [H]

Synonym: GDI_0824

Alternate gene names: 162146646

Gene position: 843535-844422 (Clockwise)

Preceding gene: 162146644

Following gene: 162146649

Centisome position: 21.39

GC content: 69.48

Gene sequence:

>888_bases
ATGACCAAGACCGTCGCGCGGTTCATTCCCCTGATCGTCGCCATTGCCATCCTGTCCTGGGCCAGCGCCTATCCGGTCGT
GCGGATCGCCCTGCGCGACCTGCCGCCGATCCCGTTGGCCGCGGCGCGCTATGCCGGGGCGGCGGTGCTCGCCATGGCGT
GGCTGGCATGGAAGCGTCCCCCATTGCCCGCCGCACGCGACGTGCCGCGCATCCTGGCCTGCGGCGTGATCGGCATCGCG
GTCTATAACGTGCTGTTCAATACCGGCGAGGTCACGGTGTCGGCCGGTGCGTCCAGCCTGCTGATCAGTGCCGCCCCGCT
GATCGCGGCCCTGATCGCGGTGGTGACGATGGGCGAACGGCTGTCCCTCTGGGGGTGGACGGGTTCGTTGCTCAGCTTCG
CGGGCGTGGTGCTGATTGCCGAGGGGCAGATCGGTGGCGTGTCCTTCGGTTCGGGGGCCACCCTGGTGTTTGGGGCCGCG
TTCTGCGGCGCGCTGTATACGACGCTGCAGAAGCGTCTGGTGCTGCGCTACGGCGCGTTGCCCAGCATCAGCTACATCCT
GATGGCCGGCGCCCTGTGCCTTTCCCCCTGGCTGCCGCAGGCCCTGACCGTCCTGCCGCACGCGCCCGTCCGCTGCTGGG
CGGCGGTGCTGGAACTGGCGGTCTTCCCGGCGGCCATAGGCTATGCGGCCTGGGCCTTCGTCGTCGGCCATATGGGGGCG
GCGCGCGGTGCCGCGCTGTTGTATCTGTTACCGCCCGCGACCCTGGTGCTGGCCTTCGTGCTGACCGGCGAAATCCCGAG
CCTGCGTACCCTGGCGGGCGGCGCGATCGTCATGGCGGGTGTGGTGGTGACCAATACCTATGGTCATCCACGCCGGCTGG
CGCGATAG

Upstream 100 bases:

>100_bases
CGTACCGAACCCCTCGCGCCAGGCGTGCAGGTCCGATATGACGCTATGCGATCGGGGTGACATCCCCAGACCGTCGATCG
GGAACGGACAAGACAGAGCA

Downstream 100 bases:

>100_bases
GGCATTGCCGCATCGGCTTCCATCGTCCGGTGCAGGAAGGTGCCGATGTCATGGCTCAGCACGCCCTGGTACGCCGCGCG
GTCGAAGCCCGGCGGGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTKTVARFIPLIVAIAILSWASAYPVVRIALRDLPPIPLAAARYAGAAVLAMAWLAWKRPPLPAARDVPRILACGVIGIA
VYNVLFNTGEVTVSAGASSLLISAAPLIAALIAVVTMGERLSLWGWTGSLLSFAGVVLIAEGQIGGVSFGSGATLVFGAA
FCGALYTTLQKRLVLRYGALPSISYILMAGALCLSPWLPQALTVLPHAPVRCWAAVLELAVFPAAIGYAAWAFVVGHMGA
ARGAALLYLLPPATLVLAFVLTGEIPSLRTLAGGAIVMAGVVVTNTYGHPRRLAR

Sequences:

>Translated_295_residues
MTKTVARFIPLIVAIAILSWASAYPVVRIALRDLPPIPLAAARYAGAAVLAMAWLAWKRPPLPAARDVPRILACGVIGIA
VYNVLFNTGEVTVSAGASSLLISAAPLIAALIAVVTMGERLSLWGWTGSLLSFAGVVLIAEGQIGGVSFGSGATLVFGAA
FCGALYTTLQKRLVLRYGALPSISYILMAGALCLSPWLPQALTVLPHAPVRCWAAVLELAVFPAAIGYAAWAFVVGHMGA
ARGAALLYLLPPATLVLAFVLTGEIPSLRTLAGGAIVMAGVVVTNTYGHPRRLAR
>Mature_294_residues
TKTVARFIPLIVAIAILSWASAYPVVRIALRDLPPIPLAAARYAGAAVLAMAWLAWKRPPLPAARDVPRILACGVIGIAV
YNVLFNTGEVTVSAGASSLLISAAPLIAALIAVVTMGERLSLWGWTGSLLSFAGVVLIAEGQIGGVSFGSGATLVFGAAF
CGALYTTLQKRLVLRYGALPSISYILMAGALCLSPWLPQALTVLPHAPVRCWAAVLELAVFPAAIGYAAWAFVVGHMGAA
RGAALLYLLPPATLVLAFVLTGEIPSLRTLAGGAIVMAGVVVTNTYGHPRRLAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30603; Mature: 30472

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTVARFIPLIVAIAILSWASAYPVVRIALRDLPPIPLAAARYAGAAVLAMAWLAWKRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PLPAARDVPRILACGVIGIAVYNVLFNTGEVTVSAGASSLLISAAPLIAALIAVVTMGER
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
LSLWGWTGSLLSFAGVVLIAEGQIGGVSFGSGATLVFGAAFCGALYTTLQKRLVLRYGAL
EEEECCHHHHHHHCCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSISYILMAGALCLSPWLPQALTVLPHAPVRCWAAVLELAVFPAAIGYAAWAFVVGHMGA
CHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ARGAALLYLLPPATLVLAFVLTGEIPSLRTLAGGAIVMAGVVVTNTYGHPRRLAR
HCCCEEEEECCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHCC
>Mature Secondary Structure 
TKTVARFIPLIVAIAILSWASAYPVVRIALRDLPPIPLAAARYAGAAVLAMAWLAWKRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PLPAARDVPRILACGVIGIAVYNVLFNTGEVTVSAGASSLLISAAPLIAALIAVVTMGER
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
LSLWGWTGSLLSFAGVVLIAEGQIGGVSFGSGATLVFGAAFCGALYTTLQKRLVLRYGAL
EEEECCHHHHHHHCCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSISYILMAGALCLSPWLPQALTVLPHAPVRCWAAVLELAVFPAAIGYAAWAFVVGHMGA
CHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ARGAALLYLLPPATLVLAFVLTGEIPSLRTLAGGAIVMAGVVVTNTYGHPRRLAR
HCCCEEEEECCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]