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The map label for this gene is yvrB [H]

Identifier: 162146489

GI number: 162146489

Start: 672582

End: 673589

Strand: Reverse

Name: yvrB [H]

Synonym: GDI_0665

Alternate gene names: 162146489

Gene position: 673589-672582 (Counterclockwise)

Preceding gene: 162146490

Following gene: 162146488

Centisome position: 17.08

GC content: 69.94

Gene sequence:

>1008_bases
GTGACGTCCGCCCGGAAGATCCTCTGGCTCAACGTCCTGCTGGCCGTGGCGGTGGTGGGCCTGTCCTGCGCCTCGCTGAT
GTGGGGCGAGACGCGGCTGTCCTTCCTCACCGCGCTGAGGGACATGGCGGCGGGCCGGCATACGGCGGGCGCGATCATCG
TCGGCCAGTTGCGCCTGCCCCGCACCCTGCTGGCCGTCGTGGTGGGGGGCGTCCTGGGATTGTCCGGCGCCGTGCTGCAG
GGCTACCTGCGCAACCCGCTGGCCGATCCGGGCATCCTTGGCGTGTCGGGCGGGGCGGCGCTGGGGGCCGTCATCGTCTT
TTATACGGGATTGATGCAGGTCTCCGTGGCCATCCTTCCGCTGGGCGGACTGGCCGGCGCGCTGTGCGCCACCGCGATAT
TGATGGGGCTGGTCGGGCGCAGCGGCGCGCTGGTCCTGCTGCTGGCCGGTGCGGCGCTCAGCAGCTTTGCCGCCGCCCTG
ACGGCCCTGACGCTGAATCTGGTGCCCAGCCCCTATGCCTCGTTCGAAATCATGCACTGGGTCATGGGATCGCTGACGGA
CCGGACGTTCACGCATGTCTGGATCAGCCTGCCGGGCGCGATCTGCGGCACCCTGCTGATGCTGTCGGCCGGACGCGCGC
TGGATGCGCTGACGCTGGGCGAGGATGTGGCGGAAAGCCTCGGCTTCCGGCTGTTCGGGCTGCGGGGCGTCCAGACGCGG
ATCGTGCTGGGATGCGCGCTGGCGGTCGGGTCCTGCGTCGCCGTTTCGGGGGCAATCGGGTTTGTCGGCCTGGTCGTGCC
GCATCTCCTGCGGTCCCTGACGGGCTACCAGCCGTCGCGCCTGCTGCTGCCGTCCCTGCTGGGGGGAAGCTGCCTGCTTC
TGCTGGCGGATATGGTGGTGCGCCTGGTGACGGTGGGACCGGAACTGCAACTGGGCGTGCTGACGGCGCTGGTCGGCGCG
CCGGTTTTCTTCGCCCGGGTCATCATGCTGAAGAGGACGGCGTCATGA

Upstream 100 bases:

>100_bases
ATCTGGACCTGCCCGCGCGCCTGTGGCTGTGTGGCCTGCCACAGACATTGGACAGTATCGCCATGCTGCGTGCCGCGCGC
CAGGACCTTGGACCATCGCC

Downstream 100 bases:

>100_bases
TCCTGATGCAGGCACAGGATATCTCGTTGACGCGCGGCGGTCGCAAGGTCGTCGATGCGGCATCCCTGACATTGGAGGCC
GGGCGCGTCATGGGCCTGAT

Product: ferrichrome ABC transporter permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MTSARKILWLNVLLAVAVVGLSCASLMWGETRLSFLTALRDMAAGRHTAGAIIVGQLRLPRTLLAVVVGGVLGLSGAVLQ
GYLRNPLADPGILGVSGGAALGAVIVFYTGLMQVSVAILPLGGLAGALCATAILMGLVGRSGALVLLLAGAALSSFAAAL
TALTLNLVPSPYASFEIMHWVMGSLTDRTFTHVWISLPGAICGTLLMLSAGRALDALTLGEDVAESLGFRLFGLRGVQTR
IVLGCALAVGSCVAVSGAIGFVGLVVPHLLRSLTGYQPSRLLLPSLLGGSCLLLLADMVVRLVTVGPELQLGVLTALVGA
PVFFARVIMLKRTAS

Sequences:

>Translated_335_residues
MTSARKILWLNVLLAVAVVGLSCASLMWGETRLSFLTALRDMAAGRHTAGAIIVGQLRLPRTLLAVVVGGVLGLSGAVLQ
GYLRNPLADPGILGVSGGAALGAVIVFYTGLMQVSVAILPLGGLAGALCATAILMGLVGRSGALVLLLAGAALSSFAAAL
TALTLNLVPSPYASFEIMHWVMGSLTDRTFTHVWISLPGAICGTLLMLSAGRALDALTLGEDVAESLGFRLFGLRGVQTR
IVLGCALAVGSCVAVSGAIGFVGLVVPHLLRSLTGYQPSRLLLPSLLGGSCLLLLADMVVRLVTVGPELQLGVLTALVGA
PVFFARVIMLKRTAS
>Mature_334_residues
TSARKILWLNVLLAVAVVGLSCASLMWGETRLSFLTALRDMAAGRHTAGAIIVGQLRLPRTLLAVVVGGVLGLSGAVLQG
YLRNPLADPGILGVSGGAALGAVIVFYTGLMQVSVAILPLGGLAGALCATAILMGLVGRSGALVLLLAGAALSSFAAALT
ALTLNLVPSPYASFEIMHWVMGSLTDRTFTHVWISLPGAICGTLLMLSAGRALDALTLGEDVAESLGFRLFGLRGVQTRI
VLGCALAVGSCVAVSGAIGFVGLVVPHLLRSLTGYQPSRLLLPSLLGGSCLLLLADMVVRLVTVGPELQLGVLTALVGAP
VFFARVIMLKRTAS

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=316, Percent_Identity=37.3417721518987, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788004, Length=277, Percent_Identity=41.8772563176895, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1790741, Length=278, Percent_Identity=35.9712230215827, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1786805, Length=313, Percent_Identity=37.0607028753994, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1786347, Length=294, Percent_Identity=32.312925170068, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786804, Length=234, Percent_Identity=27.3504273504274, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34258; Mature: 34127

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSARKILWLNVLLAVAVVGLSCASLMWGETRLSFLTALRDMAAGRHTAGAIIVGQLRLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHH
RTLLAVVVGGVLGLSGAVLQGYLRNPLADPGILGVSGGAALGAVIVFYTGLMQVSVAILP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHC
LGGLAGALCATAILMGLVGRSGALVLLLAGAALSSFAAALTALTLNLVPSPYASFEIMHW
CHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VMGSLTDRTFTHVWISLPGAICGTLLMLSAGRALDALTLGEDVAESLGFRLFGLRGVQTR
HHHHHCCCHHHHHEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCHHHH
IVLGCALAVGSCVAVSGAIGFVGLVVPHLLRSLTGYQPSRLLLPSLLGGSCLLLLADMVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHH
RLVTVGPELQLGVLTALVGAPVFFARVIMLKRTAS
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSARKILWLNVLLAVAVVGLSCASLMWGETRLSFLTALRDMAAGRHTAGAIIVGQLRLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHH
RTLLAVVVGGVLGLSGAVLQGYLRNPLADPGILGVSGGAALGAVIVFYTGLMQVSVAILP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHC
LGGLAGALCATAILMGLVGRSGALVLLLAGAALSSFAAALTALTLNLVPSPYASFEIMHW
CHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VMGSLTDRTFTHVWISLPGAICGTLLMLSAGRALDALTLGEDVAESLGFRLFGLRGVQTR
HHHHHCCCHHHHHEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCHHHH
IVLGCALAVGSCVAVSGAIGFVGLVVPHLLRSLTGYQPSRLLLPSLLGGSCLLLLADMVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHH
RLVTVGPELQLGVLTALVGAPVFFARVIMLKRTAS
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]