| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is 162146490
Identifier: 162146490
GI number: 162146490
Start: 673586
End: 674422
Strand: Reverse
Name: 162146490
Synonym: GDI_0666
Alternate gene names: NA
Gene position: 674422-673586 (Counterclockwise)
Preceding gene: 162146491
Following gene: 162146489
Centisome position: 17.1
GC content: 68.94
Gene sequence:
>837_bases ATGAAACGGGCGCTCTGGGGCATGGTGGCGGGTTTGCTGGCATGGACCAGCGCGGGCCAGGGCCGGCCGTTGCCCCGGGT GGCGTCCCTGAACCTCTGCACGGACCAGCTTGTCCTGATGCTGGCCGAACCGGAGCAGATCGTCGGGCTGAGCCCGATTG CGCGGGACTGCTGGAGTTCCGTTCTGTGCGAACAGGCCCGCCATGCCCCCGTCATGCGGCCGACGGCGGAAAATATCGTC TCGGCCCGCCCCGACGTGGTGCTGGGGGGCGTCTATACGGCGGCGGTCGCCATGCAGGCGGCGCGGGAGGAAGGGGCCCG GGTCATTGCCTTTCCCCCCGTCAAGGCGCTGGCGGATATTCCCGCCCAGATCATGACGGTGGCGAATGCGGTCGGGGCGC CGGAGCGCGGGCGGGCGCTTGCCGATGCCTTCGTCGTCCGCCTTGCGTCCCTTTCGGCGGACCGCCGGCCCGATGATCCC ACCGCCGCCATTTATGCCGCGAACGGCTTTGTCATGCACGGCGGATCGCTGCCGGACGACGTGCTGGCCCATGCCGGTTT TCGGAACTATGCGACCACCATGGGCCTGGCGCCATCGCCCCGCCTGCCCATGGAAGTGCTGATCGCCCATCCGCCCGACC TGCTGATTCTGGATCGTTCCGGCCAGGGCCATTCGCTGGCGCAGGCCCTGCTGGACCATCCGGCCTTGCAGCAGGCTTTC GCGGGACGTCACCATCTGGACCTGCCCGCGCGCCTGTGGCTGTGTGGCCTGCCACAGACATTGGACAGTATCGCCATGCT GCGTGCCGCGCGCCAGGACCTTGGACCATCGCCGTGA
Upstream 100 bases:
>100_bases GCGCGCGCGGACAACCTGCTGAACAGGCAATATGAGGACCCGATCGGCTACCTGCAGCCCGGGCGCGCGGGCTATGGCGG CTTTACGCTGAATTACTGAC
Downstream 100 bases:
>100_bases CGTCCGCCCGGAAGATCCTCTGGCTCAACGTCCTGCTGGCCGTGGCGGTGGTGGGCCTGTCCTGCGCCTCGCTGATGTGG GGCGAGACGCGGCTGTCCTT
Product: ferrichrome ABC transporter
Products: NA
Alternate protein names: Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; ABC-Type Transport System Periplasmic Component; Fe ABC Transporter; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKRALWGMVAGLLAWTSAGQGRPLPRVASLNLCTDQLVLMLAEPEQIVGLSPIARDCWSSVLCEQARHAPVMRPTAENIV SARPDVVLGGVYTAAVAMQAAREEGARVIAFPPVKALADIPAQIMTVANAVGAPERGRALADAFVVRLASLSADRRPDDP TAAIYAANGFVMHGGSLPDDVLAHAGFRNYATTMGLAPSPRLPMEVLIAHPPDLLILDRSGQGHSLAQALLDHPALQQAF AGRHHLDLPARLWLCGLPQTLDSIAMLRAARQDLGPSP
Sequences:
>Translated_278_residues MKRALWGMVAGLLAWTSAGQGRPLPRVASLNLCTDQLVLMLAEPEQIVGLSPIARDCWSSVLCEQARHAPVMRPTAENIV SARPDVVLGGVYTAAVAMQAAREEGARVIAFPPVKALADIPAQIMTVANAVGAPERGRALADAFVVRLASLSADRRPDDP TAAIYAANGFVMHGGSLPDDVLAHAGFRNYATTMGLAPSPRLPMEVLIAHPPDLLILDRSGQGHSLAQALLDHPALQQAF AGRHHLDLPARLWLCGLPQTLDSIAMLRAARQDLGPSP >Mature_278_residues MKRALWGMVAGLLAWTSAGQGRPLPRVASLNLCTDQLVLMLAEPEQIVGLSPIARDCWSSVLCEQARHAPVMRPTAENIV SARPDVVLGGVYTAAVAMQAAREEGARVIAFPPVKALADIPAQIMTVANAVGAPERGRALADAFVVRLASLSADRRPDDP TAAIYAANGFVMHGGSLPDDVLAHAGFRNYATTMGLAPSPRLPMEVLIAHPPDLLILDRSGQGHSLAQALLDHPALQQAF AGRHHLDLPARLWLCGLPQTLDSIAMLRAARQDLGPSP
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29459; Mature: 29459
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRALWGMVAGLLAWTSAGQGRPLPRVASLNLCTDQLVLMLAEPEQIVGLSPIARDCWSS CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHH VLCEQARHAPVMRPTAENIVSARPDVVLGGVYTAAVAMQAAREEGARVIAFPPVKALADI HHHHHHHCCCCCCCCHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH PAQIMTVANAVGAPERGRALADAFVVRLASLSADRRPDDPTAAIYAANGFVMHGGSLPDD HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEECCCCCHH VLAHAGFRNYATTMGLAPSPRLPMEVLIAHPPDLLILDRSGQGHSLAQALLDHPALQQAF HHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHCCHHHHHHH AGRHHLDLPARLWLCGLPQTLDSIAMLRAARQDLGPSP CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRALWGMVAGLLAWTSAGQGRPLPRVASLNLCTDQLVLMLAEPEQIVGLSPIARDCWSS CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHH VLCEQARHAPVMRPTAENIVSARPDVVLGGVYTAAVAMQAAREEGARVIAFPPVKALADI HHHHHHHCCCCCCCCHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH PAQIMTVANAVGAPERGRALADAFVVRLASLSADRRPDDPTAAIYAANGFVMHGGSLPDD HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEECCCCCHH VLAHAGFRNYATTMGLAPSPRLPMEVLIAHPPDLLILDRSGQGHSLAQALLDHPALQQAF HHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHCCHHHHHHH AGRHHLDLPARLWLCGLPQTLDSIAMLRAARQDLGPSP CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA