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The map label for this gene is lptF [H]

Identifier: 162146456

GI number: 162146456

Start: 640563

End: 641654

Strand: Reverse

Name: lptF [H]

Synonym: GDI_0632

Alternate gene names: 162146456

Gene position: 641654-640563 (Counterclockwise)

Preceding gene: 162146457

Following gene: 162146455

Centisome position: 16.27

GC content: 66.58

Gene sequence:

>1092_bases
TTGATCATTCGGAATTATCTGCTTCGTGAAATCGGCAAGCCGCTGGCCGCGATGCTCGGGGTCTGCATGGCGCTGTTCGC
CAGCTACAGCGCCGCCGACTTCCTGTCCGAGGCCGTGAACGGGCTGCTGTCCACCAATACGATCCTGGCCCTGGTGACGC
TGAAGCTGCTGATCGGCCTGGAAGTCCTGGTGCCGGTGTCGCTGTACCTGTCGATCGTCCTGGCGCTGGGCGCGCTGTAC
GGCAATTCCGAAATCACGGCGCTGCATGCGCTGCGCGTGACGCCGGGGATGATCCTGCGCCATGTCATGACCCTGGCGGC
CGGGGTCGCGATCGTGGTGGGGCTGCTGTCGCTGTTCGTGCGGCCGTGGGCCTATCACCAGTTGCACAACCTGTCCAAAT
CCGCCCAGTTGAGCCTGGATGTCGATGCGATGCAGGCCGGCACGTTCTACGTGGTGCAGAACGGCGCCCGCGTGATCTTC
CTGACGGAACGCGAGGGACCCGGCACGCCGGCACGCGACATCTTCGTCCAGGTCCGCCGCGCGAAGACGACCCAGATCAT
CCACGCGGAACTGGGCTATCCGATGACGGACGAGGGCAAGCAATCCGACGTCTATGTCCGGCTGAAGAACGCCCATGTCT
ACGATATCGGGCGCCAGCCGGGGGTCAGCGACAAGGTGCTGACCGTGCGCGAGATCACCCAGGACCCGAACCGCCACAGC
ACCGAACCGCTGGGATACAGCTCCATCGCCGCGCCCAGCCTGCAATTGGCGGCCTCGCACGCGCCGGCGGACGTGGCGGA
ATTCCAGTGGCGCCTGTCCACCCCCATCACGACCATGCTGCTGGCCATGCTGGCCGTGCCGCTGGCGCGGGGGCGCCCCC
GCCAGAACCGCTATGGCAAGCTGGGCGCCGCCATCCTGATCTTCTTCGTCTACTACCTGCTCTATACCTCGGCGCGGACG
TGGGTGCAGCACGGCATGGTGGCCGCGATGCCCGGGATCTGGTGGGCGCCGGCACTGCTGGCGGTGCTGACCGGCTTCAT
GCTGCGCGACCAGATTCCCGCCCTGTTGGGGCGGCAGGCCCGCGCGGCATGA

Upstream 100 bases:

>100_bases
TCGATGCGCGGCGATCCCCGCACCCTTCGGACCACAAGGGACGTCCTGCCCCCGTGCGCATTTCGTCGGACCGCACGTCC
CATGATGGACAGTATCGCGC

Downstream 100 bases:

>100_bases
AACGCTTCGACCGATATATCCAGATGGTCACGCTGCGCGCCTTCCTGCTGGTGGCGCTGGGGCTGACCGCCCTGTTCAGC
CTGCTGGAATTCGTCGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MIIRNYLLREIGKPLAAMLGVCMALFASYSAADFLSEAVNGLLSTNTILALVTLKLLIGLEVLVPVSLYLSIVLALGALY
GNSEITALHALRVTPGMILRHVMTLAAGVAIVVGLLSLFVRPWAYHQLHNLSKSAQLSLDVDAMQAGTFYVVQNGARVIF
LTEREGPGTPARDIFVQVRRAKTTQIIHAELGYPMTDEGKQSDVYVRLKNAHVYDIGRQPGVSDKVLTVREITQDPNRHS
TEPLGYSSIAAPSLQLAASHAPADVAEFQWRLSTPITTMLLAMLAVPLARGRPRQNRYGKLGAAILIFFVYYLLYTSART
WVQHGMVAAMPGIWWAPALLAVLTGFMLRDQIPALLGRQARAA

Sequences:

>Translated_363_residues
MIIRNYLLREIGKPLAAMLGVCMALFASYSAADFLSEAVNGLLSTNTILALVTLKLLIGLEVLVPVSLYLSIVLALGALY
GNSEITALHALRVTPGMILRHVMTLAAGVAIVVGLLSLFVRPWAYHQLHNLSKSAQLSLDVDAMQAGTFYVVQNGARVIF
LTEREGPGTPARDIFVQVRRAKTTQIIHAELGYPMTDEGKQSDVYVRLKNAHVYDIGRQPGVSDKVLTVREITQDPNRHS
TEPLGYSSIAAPSLQLAASHAPADVAEFQWRLSTPITTMLLAMLAVPLARGRPRQNRYGKLGAAILIFFVYYLLYTSART
WVQHGMVAAMPGIWWAPALLAVLTGFMLRDQIPALLGRQARAA
>Mature_363_residues
MIIRNYLLREIGKPLAAMLGVCMALFASYSAADFLSEAVNGLLSTNTILALVTLKLLIGLEVLVPVSLYLSIVLALGALY
GNSEITALHALRVTPGMILRHVMTLAAGVAIVVGLLSLFVRPWAYHQLHNLSKSAQLSLDVDAMQAGTFYVVQNGARVIF
LTEREGPGTPARDIFVQVRRAKTTQIIHAELGYPMTDEGKQSDVYVRLKNAHVYDIGRQPGVSDKVLTVREITQDPNRHS
TEPLGYSSIAAPSLQLAASHAPADVAEFQWRLSTPITTMLLAMLAVPLARGRPRQNRYGKLGAAILIFFVYYLLYTSART
WVQHGMVAAMPGIWWAPALLAVLTGFMLRDQIPALLGRQARAA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=379, Percent_Identity=25.065963060686, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 39626; Mature: 39626

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRNYLLREIGKPLAAMLGVCMALFASYSAADFLSEAVNGLLSTNTILALVTLKLLIGL
CCHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVLVPVSLYLSIVLALGALYGNSEITALHALRVTPGMILRHVMTLAAGVAIVVGLLSLFV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RPWAYHQLHNLSKSAQLSLDVDAMQAGTFYVVQNGARVIFLTEREGPGTPARDIFVQVRR
CHHHHHHHHHCCCCCEEEEEHHHHCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHH
AKTTQIIHAELGYPMTDEGKQSDVYVRLKNAHVYDIGRQPGVSDKVLTVREITQDPNRHS
HHHHHEEEHHCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCHHHHHHHHCCCCCCC
TEPLGYSSIAAPSLQLAASHAPADVAEFQWRLSTPITTMLLAMLAVPLARGRPRQNRYGK
CCCCCCCHHCCCCHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHH
LGAAILIFFVYYLLYTSARTWVQHGMVAAMPGIWWAPALLAVLTGFMLRDQIPALLGRQA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RAA
CCC
>Mature Secondary Structure
MIIRNYLLREIGKPLAAMLGVCMALFASYSAADFLSEAVNGLLSTNTILALVTLKLLIGL
CCHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVLVPVSLYLSIVLALGALYGNSEITALHALRVTPGMILRHVMTLAAGVAIVVGLLSLFV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RPWAYHQLHNLSKSAQLSLDVDAMQAGTFYVVQNGARVIFLTEREGPGTPARDIFVQVRR
CHHHHHHHHHCCCCCEEEEEHHHHCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHH
AKTTQIIHAELGYPMTDEGKQSDVYVRLKNAHVYDIGRQPGVSDKVLTVREITQDPNRHS
HHHHHEEEHHCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCHHHHHHHHCCCCCCC
TEPLGYSSIAAPSLQLAASHAPADVAEFQWRLSTPITTMLLAMLAVPLARGRPRQNRYGK
CCCCCCCHHCCCCHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHH
LGAAILIFFVYYLLYTSARTWVQHGMVAAMPGIWWAPALLAVLTGFMLRDQIPALLGRQA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]