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The map label for this gene is amsK [H]

Identifier: 162146457

GI number: 162146457

Start: 641830

End: 643239

Strand: Reverse

Name: amsK [H]

Synonym: GDI_0633

Alternate gene names: 162146457

Gene position: 643239-641830 (Counterclockwise)

Preceding gene: 162146461

Following gene: 162146456

Centisome position: 16.31

GC content: 69.86

Gene sequence:

>1410_bases
ATGGACGTTCCCGGTCATATGCCCCGCATGAGGACCCCCCGCCCAGACACCACGCGGATTTCGAGCATGACACAGGCCGG
CCCGGCCGGTTCCGGGCCCGGTGCCGGGATGAAGATCCTGTTCGCGTTCGAAAATCCGCTGCCCAGCACCGAGGCCGACG
CCGAAGTCTTCGTCACCACCGCGCGCTACCTGGCGCCGCTGGTCGCGCGGGCATGGCTGCACGTGCCGATGCGCGACCGC
GCGGCCTGCGCCGCATTGCAGCAGGCCATGGGGCAGCAGGCCACAGGGCAGCAGGCCACGGGCCGGCAGGCGACGGACCT
GTCGGTGATACGGGCGTGGGCGCCGCCGGCGCCGGCCGGGTTGCGGCACCTGGCCTGCGGGCTGACGATCGTCTGGCGCC
GCGCGTTCCGTCAGGCGAGTTTCGTCTATACGCGCAACCTGTGGATCGCGTGGGTGTCCATCCTGTTCCGCCAGCGCGTG
GTCTTCGACCATTACCGCCCCTGGCCCGACCAGATTCCGCCCCTGCGCCGCTGGCTGCACCGGCTGATGTGCCATGAACG
GTTCGTCATCAATATCTGCCATTCCGATTATACGCGGCAGAAATATCTGGACCTGGGCATTCCCGCCGAAAAACTGCACT
GCATCCGCAACGGCTTCGAACCCGGGCGGCTGCGCACGCCCATGGCGGCCGACGCCGCCCGGCGGGCGCTGGACATTCCG
GCCGATGCCAGGACCGTGGTCTATACCGGCCGCGTCAACCACAAGAAGGGCCTGCCGGTGGTGATCGAGGCCGCCCGCAT
GCTGCCCGACCTGCTGTTCATCCTGGTCGGTTCTTACGGCGAGGGGCCGATCGAGGACATGGCCCGCGACCTGCCCAACG
TGCGCATCGTGCCGTTCCAGCCGCCGGAGGTCCTGAGCCAGTACGTGTTCGCCGCCGACGTGCTGCTGATCCCGCCATCG
CTGCAGCCGCTGGCACGCTATGGATCGACCGTGCTGCCGCTGAAGCTGTTCTTCTACATGGCGTCGGGCCGTCCGATCCT
GGCCGGCAACACCCCGGATGTGCGCGAGGTCCTGCGCCACGACCAAAATGCCTGGCTCTGCCAGCCGGATTCTCCGCCGG
CCCTGGCCGATGCCCTGCGCCGGCTGATGGACGACCCCGCCCTGTCCACGCGCCTGGCCGCGACCGCGCTGGCCGAAAGC
CAGGCCCTGACATGGGATGCGCGGGCAAACCGTATCATCGCCGCCATCGCGGAACGCATGACGGCGCCATCCACCCCCGC
CGGTGTCTGGGACGGCGCGCAGCGTCGGGCCTGGCGGCGGCAATCCTGGCGGTGGCTGGTGCACCTGCTGCGCACCGGGT
CGCCCGTCCTGCCGCCCGACACGATCCAGGGCGACCCCGCCCCGCCCTGA

Upstream 100 bases:

>100_bases
TCATTTTATGGCAGGATTTTAGTGCGCCAGGAATGAATGAGGCCTTATCGGGCCATCCACCGTTTATGGCCCCGCTTCCG
GACCCCGCTTCTGGACACGG

Downstream 100 bases:

>100_bases
AGCCGGTGGCCGGGCGTGCGCGGCGTTTGACGGTGGGGGTAGCGATGAATATGATGACGGCACGTCCGGGACGGGTCGAT
GCGCGGCGATCCCCGCACCC

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MDVPGHMPRMRTPRPDTTRISSMTQAGPAGSGPGAGMKILFAFENPLPSTEADAEVFVTTARYLAPLVARAWLHVPMRDR
AACAALQQAMGQQATGQQATGRQATDLSVIRAWAPPAPAGLRHLACGLTIVWRRAFRQASFVYTRNLWIAWVSILFRQRV
VFDHYRPWPDQIPPLRRWLHRLMCHERFVINICHSDYTRQKYLDLGIPAEKLHCIRNGFEPGRLRTPMAADAARRALDIP
ADARTVVYTGRVNHKKGLPVVIEAARMLPDLLFILVGSYGEGPIEDMARDLPNVRIVPFQPPEVLSQYVFAADVLLIPPS
LQPLARYGSTVLPLKLFFYMASGRPILAGNTPDVREVLRHDQNAWLCQPDSPPALADALRRLMDDPALSTRLAATALAES
QALTWDARANRIIAAIAERMTAPSTPAGVWDGAQRRAWRRQSWRWLVHLLRTGSPVLPPDTIQGDPAPP

Sequences:

>Translated_469_residues
MDVPGHMPRMRTPRPDTTRISSMTQAGPAGSGPGAGMKILFAFENPLPSTEADAEVFVTTARYLAPLVARAWLHVPMRDR
AACAALQQAMGQQATGQQATGRQATDLSVIRAWAPPAPAGLRHLACGLTIVWRRAFRQASFVYTRNLWIAWVSILFRQRV
VFDHYRPWPDQIPPLRRWLHRLMCHERFVINICHSDYTRQKYLDLGIPAEKLHCIRNGFEPGRLRTPMAADAARRALDIP
ADARTVVYTGRVNHKKGLPVVIEAARMLPDLLFILVGSYGEGPIEDMARDLPNVRIVPFQPPEVLSQYVFAADVLLIPPS
LQPLARYGSTVLPLKLFFYMASGRPILAGNTPDVREVLRHDQNAWLCQPDSPPALADALRRLMDDPALSTRLAATALAES
QALTWDARANRIIAAIAERMTAPSTPAGVWDGAQRRAWRRQSWRWLVHLLRTGSPVLPPDTIQGDPAPP
>Mature_469_residues
MDVPGHMPRMRTPRPDTTRISSMTQAGPAGSGPGAGMKILFAFENPLPSTEADAEVFVTTARYLAPLVARAWLHVPMRDR
AACAALQQAMGQQATGQQATGRQATDLSVIRAWAPPAPAGLRHLACGLTIVWRRAFRQASFVYTRNLWIAWVSILFRQRV
VFDHYRPWPDQIPPLRRWLHRLMCHERFVINICHSDYTRQKYLDLGIPAEKLHCIRNGFEPGRLRTPMAADAARRALDIP
ADARTVVYTGRVNHKKGLPVVIEAARMLPDLLFILVGSYGEGPIEDMARDLPNVRIVPFQPPEVLSQYVFAADVLLIPPS
LQPLARYGSTVLPLKLFFYMASGRPILAGNTPDVREVLRHDQNAWLCQPDSPPALADALRRLMDDPALSTRLAATALAES
QALTWDARANRIIAAIAERMTAPSTPAGVWDGAQRRAWRRQSWRWLVHLLRTGSPVLPPDTIQGDPAPP

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 52242; Mature: 52242

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVPGHMPRMRTPRPDTTRISSMTQAGPAGSGPGAGMKILFAFENPLPSTEADAEVFVTT
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEHHH
ARYLAPLVARAWLHVPMRDRAACAALQQAMGQQATGQQATGRQATDLSVIRAWAPPAPAG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHH
LRHLACGLTIVWRRAFRQASFVYTRNLWIAWVSILFRQRVVFDHYRPWPDQIPPLRRWLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RLMCHERFVINICHSDYTRQKYLDLGIPAEKLHCIRNGFEPGRLRTPMAADAARRALDIP
HHHHHHHHEEEEHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC
ADARTVVYTGRVNHKKGLPVVIEAARMLPDLLFILVGSYGEGPIEDMARDLPNVRIVPFQ
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEECCC
PPEVLSQYVFAADVLLIPPSLQPLARYGSTVLPLKLFFYMASGRPILAGNTPDVREVLRH
CHHHHHHHHHHHHHEEECCCCHHHHHCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHC
DQNAWLCQPDSPPALADALRRLMDDPALSTRLAATALAESQALTWDARANRIIAAIAERM
CCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH
TAPSTPAGVWDGAQRRAWRRQSWRWLVHLLRTGSPVLPPDTIQGDPAPP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDVPGHMPRMRTPRPDTTRISSMTQAGPAGSGPGAGMKILFAFENPLPSTEADAEVFVTT
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEHHH
ARYLAPLVARAWLHVPMRDRAACAALQQAMGQQATGQQATGRQATDLSVIRAWAPPAPAG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHH
LRHLACGLTIVWRRAFRQASFVYTRNLWIAWVSILFRQRVVFDHYRPWPDQIPPLRRWLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RLMCHERFVINICHSDYTRQKYLDLGIPAEKLHCIRNGFEPGRLRTPMAADAARRALDIP
HHHHHHHHEEEEHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC
ADARTVVYTGRVNHKKGLPVVIEAARMLPDLLFILVGSYGEGPIEDMARDLPNVRIVPFQ
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEECCC
PPEVLSQYVFAADVLLIPPSLQPLARYGSTVLPLKLFFYMASGRPILAGNTPDVREVLRH
CHHHHHHHHHHHHHEEECCCCHHHHHCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHC
DQNAWLCQPDSPPALADALRRLMDDPALSTRLAATALAESQALTWDARANRIIAAIAERM
CCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH
TAPSTPAGVWDGAQRRAWRRQSWRWLVHLLRTGSPVLPPDTIQGDPAPP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]