| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is nahA [H]
Identifier: 162146431
GI number: 162146431
Start: 613283
End: 615313
Strand: Direct
Name: nahA [H]
Synonym: GDI_0606
Alternate gene names: 162146431
Gene position: 613283-615313 (Clockwise)
Preceding gene: 162146430
Following gene: 162146435
Centisome position: 15.55
GC content: 71.69
Gene sequence:
>2031_bases ATGCCGCTGCCCGCCTCGGCGCATTATTCCGGCCAGACCCTGTCCCTGGCCAACGGCCTGGCCGTGCAGTGGGACCACGC GCCGACACCCCTGCTGCGCCGCGCGGCCGATCGGCTGAGGGCACGCCTGGACCGGCTGGCCGGCCGGGTGCTGCCGGCCG ACGACCACGCGTCGGGGGCCGCGATGCTGCGGGTCCGCTACGGGGCCGACCCGTCCTTCCTCGCCCTGGGCGAGAAGGAG CAGTACCGCCTGGCCGTCCGTCCGGACGGCATCACGCTGGACGCCGCCGGTCCCGCCGGGGTGCTGGACGGGTTCGCCAC CCTGGCGCAACTGGCGGCGCAGGGGCCGCAGGGCCCGGTGCTGATGCAGGCCGATATCGACGACCGGCCGCGCTTTCCCT GGCGCGGCATCATGATCGACGTCTCGCGCCACTTCATGCGCATCGAGACCCTGCATCGGCAGATCGACGCGATGGAGCAG GTGAAGCTGAACGTGCTGCACCTGCATCTGGGCGATTCCCAGGGATTTCGGGTCGAAAGCCGGCTGTTCCCGGGCCTGCA GCGGCAGGGGTCGCATGGCCAGTTCTATACCCAGGCCCAGATCCGCGACCTGGTCGCCTACGCCGCCGATCGCGGCGTGC GCATCGTGCCGGAATTCGACACGCCCGGCCACGCGCTGGCCATCCTGCTGGCCTATCCCGCGCTGGCGGCCCAGCCGGTC GATCCGGCCATGCCGGACCCCGACGACGCGGCGCTGAACCCGACGCTGGATGCCACGCTGCACTTCGTCACGCAGCTATA CGGCGAAATGGGGCGCCTGTTCTCGGATCGCTATTTCCATGCCGGCGGCGATGAGGTGCAGGCCGAACAATGGACCCGCA ATCCGAAGATTACGGCGTTCATGAAGGCCCACGGCTTCGCGGACACCGCGTCGCTGCAGGCGGCCTTTACCGCGCGGGTG CAATCCGTGCTGGCCCGCCAGGGCAAGATCATGGTGGGCTGGGACGAGGTCAGCGCGGCCCCGATTCCCAAAAGCGTGGT GGTCGAGGCCTGGCGGTCGTCCAAATTCATCGGCACCGCCACCCGGGCGGGCCACCCGGTCGTGGTCTCGGCCGGCTATT ATCTCGACCTGCTGAACCCGGCGGAGCAGCATTACCGGGTCGATCCGCTGGACGTGCAGGCCAGCGGCCTGACCCGCGCG CAGGCCGATATCAAGCGCGTGACGATGGGCCCCCTGGTGGACGCCTTCACGCTCGACCCCACCCTGCCGCCGCTGGATGC CGCGCAGCAGAAGCTGGTGCTGGGCGGCGAGGCCCCGCTGTGGAGCGAACTGGTCACGGACGAAACGCTGATGCGCGCCT GTGTGCCGCGCGCCGCCGCCATAGCCGAGCGGTTCTGGTCGCAGCCGGAGATCCGCGATGTCGATGGCATGGATCGCCGC CTGACGGAGGTGGCGAGCCGCCTGGAGGTGACCGGCCTGCAGGCGCGGGCGAACGCCTATCGGATGCAGGCCCGCCTGGC GCCCGCCGATCCCGGGGCGGTCGCCTGCCTGATGGGTGCCGTGATGCCGGTGCGCAATTACGCCCTGAACAGCTTCGTCC GGCGCAGCGGCCAGGTGCGGTTCGACGAACTGGCGGAAATCGCATCCCCCGACCCCATCGCCGCGATGCGGTTCAACGCG CTGGCCGCGCGCTTCGCCGCCGGGGATCGCGGCGTGGCGGAGGCGTTGCGGGCGCAACTCGGCGCGTGGGCCGCGTGCGG GGATCGCTTCGCCACGGTCGCGCAGGGCGTGGGCGCGCTGGAACAGGGCCTGCCGGTGGCGCGGGACATCGCGGCCCTGG CCCGCATCGGGCTGGCCGCCCTGTCCGGCCCCCTGGACGACGCGCAGCGCCGCGATGCCGTGGCACGGATCGCAGCCGAC CAGGCGGTGGTCGAGTCGTTTGCCGGCGTGGTGCGGACCCACGGCGTGAAACCGCCGCCCGCCGGGCTGCTGGTGGCGAT CCTGCCCGGGATCAGGTCCCTGATGGGGTAG
Upstream 100 bases:
>100_bases GGGCCGGTGGCGGCATGGCGGGCGGCGTGGCGGCCGCGGCGCTGGGCGCGGTGCTGGCCGTGGCGCTGCCGGCGGGGCAC GCGCGGGCGGCACCGGCGTG
Downstream 100 bases:
>100_bases CAGCGGCCCCTGGTCTGCCCTATCGCGCGGCGTCGCGCGCGCGGGCGAACCAGGGCGTCATGCGTCGCAATGCCTCCTCC AGCCGGTCGGTCGAGACCGC
Product: beta-N-acetylhexosaminidase
Products: NA
Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 676; Mature: 675
Protein sequence:
>676_residues MPLPASAHYSGQTLSLANGLAVQWDHAPTPLLRRAADRLRARLDRLAGRVLPADDHASGAAMLRVRYGADPSFLALGEKE QYRLAVRPDGITLDAAGPAGVLDGFATLAQLAAQGPQGPVLMQADIDDRPRFPWRGIMIDVSRHFMRIETLHRQIDAMEQ VKLNVLHLHLGDSQGFRVESRLFPGLQRQGSHGQFYTQAQIRDLVAYAADRGVRIVPEFDTPGHALAILLAYPALAAQPV DPAMPDPDDAALNPTLDATLHFVTQLYGEMGRLFSDRYFHAGGDEVQAEQWTRNPKITAFMKAHGFADTASLQAAFTARV QSVLARQGKIMVGWDEVSAAPIPKSVVVEAWRSSKFIGTATRAGHPVVVSAGYYLDLLNPAEQHYRVDPLDVQASGLTRA QADIKRVTMGPLVDAFTLDPTLPPLDAAQQKLVLGGEAPLWSELVTDETLMRACVPRAAAIAERFWSQPEIRDVDGMDRR LTEVASRLEVTGLQARANAYRMQARLAPADPGAVACLMGAVMPVRNYALNSFVRRSGQVRFDELAEIASPDPIAAMRFNA LAARFAAGDRGVAEALRAQLGAWAACGDRFATVAQGVGALEQGLPVARDIAALARIGLAALSGPLDDAQRRDAVARIAAD QAVVESFAGVVRTHGVKPPPAGLLVAILPGIRSLMG
Sequences:
>Translated_676_residues MPLPASAHYSGQTLSLANGLAVQWDHAPTPLLRRAADRLRARLDRLAGRVLPADDHASGAAMLRVRYGADPSFLALGEKE QYRLAVRPDGITLDAAGPAGVLDGFATLAQLAAQGPQGPVLMQADIDDRPRFPWRGIMIDVSRHFMRIETLHRQIDAMEQ VKLNVLHLHLGDSQGFRVESRLFPGLQRQGSHGQFYTQAQIRDLVAYAADRGVRIVPEFDTPGHALAILLAYPALAAQPV DPAMPDPDDAALNPTLDATLHFVTQLYGEMGRLFSDRYFHAGGDEVQAEQWTRNPKITAFMKAHGFADTASLQAAFTARV QSVLARQGKIMVGWDEVSAAPIPKSVVVEAWRSSKFIGTATRAGHPVVVSAGYYLDLLNPAEQHYRVDPLDVQASGLTRA QADIKRVTMGPLVDAFTLDPTLPPLDAAQQKLVLGGEAPLWSELVTDETLMRACVPRAAAIAERFWSQPEIRDVDGMDRR LTEVASRLEVTGLQARANAYRMQARLAPADPGAVACLMGAVMPVRNYALNSFVRRSGQVRFDELAEIASPDPIAAMRFNA LAARFAAGDRGVAEALRAQLGAWAACGDRFATVAQGVGALEQGLPVARDIAALARIGLAALSGPLDDAQRRDAVARIAAD QAVVESFAGVVRTHGVKPPPAGLLVAILPGIRSLMG >Mature_675_residues PLPASAHYSGQTLSLANGLAVQWDHAPTPLLRRAADRLRARLDRLAGRVLPADDHASGAAMLRVRYGADPSFLALGEKEQ YRLAVRPDGITLDAAGPAGVLDGFATLAQLAAQGPQGPVLMQADIDDRPRFPWRGIMIDVSRHFMRIETLHRQIDAMEQV KLNVLHLHLGDSQGFRVESRLFPGLQRQGSHGQFYTQAQIRDLVAYAADRGVRIVPEFDTPGHALAILLAYPALAAQPVD PAMPDPDDAALNPTLDATLHFVTQLYGEMGRLFSDRYFHAGGDEVQAEQWTRNPKITAFMKAHGFADTASLQAAFTARVQ SVLARQGKIMVGWDEVSAAPIPKSVVVEAWRSSKFIGTATRAGHPVVVSAGYYLDLLNPAEQHYRVDPLDVQASGLTRAQ ADIKRVTMGPLVDAFTLDPTLPPLDAAQQKLVLGGEAPLWSELVTDETLMRACVPRAAAIAERFWSQPEIRDVDGMDRRL TEVASRLEVTGLQARANAYRMQARLAPADPGAVACLMGAVMPVRNYALNSFVRRSGQVRFDELAEIASPDPIAAMRFNAL AARFAAGDRGVAEALRAQLGAWAACGDRFATVAQGVGALEQGLPVARDIAALARIGLAALSGPLDDAQRRDAVARIAADQ AVVESFAGVVRTHGVKPPPAGLLVAILPGIRSLMG
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
Organism=Homo sapiens, GI4504373, Length=443, Percent_Identity=33.6343115124154, Blast_Score=245, Evalue=1e-64, Organism=Homo sapiens, GI189181666, Length=436, Percent_Identity=31.1926605504587, Blast_Score=226, Evalue=5e-59, Organism=Caenorhabditis elegans, GI17569815, Length=445, Percent_Identity=30.7865168539326, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24657468, Length=429, Percent_Identity=27.2727272727273, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI17647501, Length=429, Percent_Identity=27.2727272727273, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI281365639, Length=429, Percent_Identity=27.5058275058275, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24657474, Length=429, Percent_Identity=27.5058275058275, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI45551090, Length=486, Percent_Identity=28.6008230452675, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24653074, Length=481, Percent_Identity=28.6902286902287, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI17933586, Length=447, Percent_Identity=28.6353467561521, Blast_Score=132, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR011658 [H]
Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 72742; Mature: 72611
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPASAHYSGQTLSLANGLAVQWDHAPTPLLRRAADRLRARLDRLAGRVLPADDHASGA CCCCCCCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE AMLRVRYGADPSFLALGEKEQYRLAVRPDGITLDAAGPAGVLDGFATLAQLAAQGPQGPV EEEEEEECCCCCEEEECCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCE LMQADIDDRPRFPWRGIMIDVSRHFMRIETLHRQIDAMEQVKLNVLHLHLGDSQGFRVES EEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCEEHH RLFPGLQRQGSHGQFYTQAQIRDLVAYAADRGVRIVPEFDTPGHALAILLAYPALAAQPV HHCCCHHCCCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCC DPAMPDPDDAALNPTLDATLHFVTQLYGEMGRLFSDRYFHAGGDEVQAEQWTRNPKITAF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEE MKAHGFADTASLQAAFTARVQSVLARQGKIMVGWDEVSAAPIPKSVVVEAWRSSKFIGTA EECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEC TRAGHPVVVSAGYYLDLLNPAEQHYRVDPLDVQASGLTRAQADIKRVTMGPLVDAFTLDP CCCCCCEEEECCCEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHEECCC TLPPLDAAQQKLVLGGEAPLWSELVTDETLMRACVPRAAAIAERFWSQPEIRDVDGMDRR CCCCCHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LTEVASRLEVTGLQARANAYRMQARLAPADPGAVACLMGAVMPVRNYALNSFVRRSGQVR HHHHHHHHHHHCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FDELAEIASPDPIAAMRFNALAARFAAGDRGVAEALRAQLGAWAACGDRFATVAQGVGAL HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EQGLPVARDIAALARIGLAALSGPLDDAQRRDAVARIAADQAVVESFAGVVRTHGVKPPP HHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGLLVAILPGIRSLMG HHHHHHHHHHHHHHCC >Mature Secondary Structure PLPASAHYSGQTLSLANGLAVQWDHAPTPLLRRAADRLRARLDRLAGRVLPADDHASGA CCCCCCCCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE AMLRVRYGADPSFLALGEKEQYRLAVRPDGITLDAAGPAGVLDGFATLAQLAAQGPQGPV EEEEEEECCCCCEEEECCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCE LMQADIDDRPRFPWRGIMIDVSRHFMRIETLHRQIDAMEQVKLNVLHLHLGDSQGFRVES EEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCEEHH RLFPGLQRQGSHGQFYTQAQIRDLVAYAADRGVRIVPEFDTPGHALAILLAYPALAAQPV HHCCCHHCCCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCC DPAMPDPDDAALNPTLDATLHFVTQLYGEMGRLFSDRYFHAGGDEVQAEQWTRNPKITAF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEE MKAHGFADTASLQAAFTARVQSVLARQGKIMVGWDEVSAAPIPKSVVVEAWRSSKFIGTA EECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEC TRAGHPVVVSAGYYLDLLNPAEQHYRVDPLDVQASGLTRAQADIKRVTMGPLVDAFTLDP CCCCCCEEEECCCEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHEECCC TLPPLDAAQQKLVLGGEAPLWSELVTDETLMRACVPRAAAIAERFWSQPEIRDVDGMDRR CCCCCHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LTEVASRLEVTGLQARANAYRMQARLAPADPGAVACLMGAVMPVRNYALNSFVRRSGQVR HHHHHHHHHHHCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FDELAEIASPDPIAAMRFNALAARFAAGDRGVAEALRAQLGAWAACGDRFATVAQGVGAL HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EQGLPVARDIAALARIGLAALSGPLDDAQRRDAVARIAADQAVVESFAGVVRTHGVKPPP HHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGLLVAILPGIRSLMG HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7881557; 12949112 [H]