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The map label for this gene is alsB [H]

Identifier: 162146150

GI number: 162146150

Start: 331198

End: 332310

Strand: Direct

Name: alsB [H]

Synonym: GDI_0322

Alternate gene names: 162146150

Gene position: 331198-332310 (Clockwise)

Preceding gene: 162146149

Following gene: 162146153

Centisome position: 8.4

GC content: 65.23

Gene sequence:

>1113_bases
ATGTCGTTCATCAAGGCCTACATTGAACAGCAGACGATCAGCCGGCGCAACCTGCTCCTGCTGTCGGCCTACGGGCTTGG
CGGGATGGCGACGATGGGCGCGCTGCGTCCGCGCGGCGCGCGGGCGGCGGGGTCGGCGCCGCCGATCGCGTGGAGCTATC
GCGACCGGACGGACCCGTACTGGAACGCGATCGTTTCCGGCGGCGAGGCGTTCGTCCAGAGCCTGGGCCTGCCCCGGAGC
GCGCTGATCAACCTGATCAACGAAGGATCGAGCGAGAAATCCCTTGCCGACATCAAGGCGGTTCTGTCGCGCTACGGCAG
CGGGGTCGCGCTGGCCGCCGACACCAACGACGCCCCGAACTGCCGCCCGGTGGTCGAGGCGGTCAGCCGGGCCGGCGCCT
ATGTCTCGACCATCTGGAACAAGACCGACGACCTGCATCCCTGGGATTTCGGCGACCATTACGTCTCGCACATGACATGG
TCGGATGTCGGGCCGTCGGAACAGACGGCGCGGCTGCTGTTCGATGCGATGGGCGGCAAGGGCGGCGTAGTGCATCTGGG
CGGCATCGCCTCCAATAACCCGTCCATCGAGCGCCTGGCCGGGCTGAAGAACGCGCTGAAGGCCTATCCGAATGTCGAGC
TTCCGGGGGTCCAGGCCGCCGACTGGGATACCCAGAAGGCCAATCAGGTCATGTCCGGCTTCCTGACCCGCTACGGCGAC
GGGATCAAGGGCGTGCACTGCGCCAGCGACACCATCGCCTATGGCGTGATCGAGGCGCTGCGGGCCGAGGGGATCGAGAC
CATGCCCATCGTCTCCTATAACGGGAATCCGCAGGCGGTGGATCTGGTGATCAAGGGCAAAATCCTGGCGACGGTGTTCA
ACAACCCGTACTGGGGCGGCGGCATCACGGCGGCGCTGGCCTATTATGCCGCGACGGGGGTCTTCAGGCCGTCCGCCGAG
CCGAAGGACCATCGCGAATTCTACGGTCCGACCGTCATGGTGACCGCCACGGACGCGCGGGACTTCAAATCGAAATATAT
CGACGGCAATCCGACATACGACTGGAAGGATTTCTGGGGCCTGAGCAAGGGCCAGATCCAGTACAAAGCCTGA

Upstream 100 bases:

>100_bases
AGCGCAACGATATCCCGCAGCACGCGCGGCGCGAGGTCGCCTGACGACCCGGGCCCGTGCCCGCAATGGTGTGCCTCAAA
ACAGGGGCGTGGAGACACAC

Downstream 100 bases:

>100_bases
CCGGCAGGGCGGACCTTGCCCGGGTCCTGCCGCGGAACGGTCGAGGATCGTGCTGGCGTGCGTCGGCACGCCCGTTCCCG
CCCCCTTGACCGCGGCCGAG

Product: hypothetical protein

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: ALBP [H]

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MSFIKAYIEQQTISRRNLLLLSAYGLGGMATMGALRPRGARAAGSAPPIAWSYRDRTDPYWNAIVSGGEAFVQSLGLPRS
ALINLINEGSSEKSLADIKAVLSRYGSGVALAADTNDAPNCRPVVEAVSRAGAYVSTIWNKTDDLHPWDFGDHYVSHMTW
SDVGPSEQTARLLFDAMGGKGGVVHLGGIASNNPSIERLAGLKNALKAYPNVELPGVQAADWDTQKANQVMSGFLTRYGD
GIKGVHCASDTIAYGVIEALRAEGIETMPIVSYNGNPQAVDLVIKGKILATVFNNPYWGGGITAALAYYAATGVFRPSAE
PKDHREFYGPTVMVTATDARDFKSKYIDGNPTYDWKDFWGLSKGQIQYKA

Sequences:

>Translated_370_residues
MSFIKAYIEQQTISRRNLLLLSAYGLGGMATMGALRPRGARAAGSAPPIAWSYRDRTDPYWNAIVSGGEAFVQSLGLPRS
ALINLINEGSSEKSLADIKAVLSRYGSGVALAADTNDAPNCRPVVEAVSRAGAYVSTIWNKTDDLHPWDFGDHYVSHMTW
SDVGPSEQTARLLFDAMGGKGGVVHLGGIASNNPSIERLAGLKNALKAYPNVELPGVQAADWDTQKANQVMSGFLTRYGD
GIKGVHCASDTIAYGVIEALRAEGIETMPIVSYNGNPQAVDLVIKGKILATVFNNPYWGGGITAALAYYAATGVFRPSAE
PKDHREFYGPTVMVTATDARDFKSKYIDGNPTYDWKDFWGLSKGQIQYKA
>Mature_369_residues
SFIKAYIEQQTISRRNLLLLSAYGLGGMATMGALRPRGARAAGSAPPIAWSYRDRTDPYWNAIVSGGEAFVQSLGLPRSA
LINLINEGSSEKSLADIKAVLSRYGSGVALAADTNDAPNCRPVVEAVSRAGAYVSTIWNKTDDLHPWDFGDHYVSHMTWS
DVGPSEQTARLLFDAMGGKGGVVHLGGIASNNPSIERLAGLKNALKAYPNVELPGVQAADWDTQKANQVMSGFLTRYGDG
IKGVHCASDTIAYGVIEALRAEGIETMPIVSYNGNPQAVDLVIKGKILATVFNNPYWGGGITAALAYYAATGVFRPSAEP
KDHREFYGPTVMVTATDARDFKSKYIDGNPTYDWKDFWGLSKGQIQYKA

Specific function: Part of the binding-protein-dependent transport system AlsBAC for D-allose [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790526, Length=257, Percent_Identity=27.6264591439689, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 39868; Mature: 39737

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFIKAYIEQQTISRRNLLLLSAYGLGGMATMGALRPRGARAAGSAPPIAWSYRDRTDPY
CHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHH
WNAIVSGGEAFVQSLGLPRSALINLINEGSSEKSLADIKAVLSRYGSGVALAADTNDAPN
HHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC
CRPVVEAVSRAGAYVSTIWNKTDDLHPWDFGDHYVSHMTWSDVGPSEQTARLLFDAMGGK
CHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHCEECCCCCCHHHHHHHHHHCCCC
GGVVHLGGIASNNPSIERLAGLKNALKAYPNVELPGVQAADWDTQKANQVMSGFLTRYGD
CCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
GIKGVHCASDTIAYGVIEALRAEGIETMPIVSYNGNPQAVDLVIKGKILATVFNNPYWGG
CCCCEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECEEEEEEECCCCCCC
GITAALAYYAATGVFRPSAEPKDHREFYGPTVMVTATDARDFKSKYIDGNPTYDWKDFWG
HHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHCC
LSKGQIQYKA
CCCCCEEECC
>Mature Secondary Structure 
SFIKAYIEQQTISRRNLLLLSAYGLGGMATMGALRPRGARAAGSAPPIAWSYRDRTDPY
HHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHH
WNAIVSGGEAFVQSLGLPRSALINLINEGSSEKSLADIKAVLSRYGSGVALAADTNDAPN
HHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC
CRPVVEAVSRAGAYVSTIWNKTDDLHPWDFGDHYVSHMTWSDVGPSEQTARLLFDAMGGK
CHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHCEECCCCCCHHHHHHHHHHCCCC
GGVVHLGGIASNNPSIERLAGLKNALKAYPNVELPGVQAADWDTQKANQVMSGFLTRYGD
CCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
GIKGVHCASDTIAYGVIEALRAEGIETMPIVSYNGNPQAVDLVIKGKILATVFNNPYWGG
CCCCEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECEEEEEEECCCCCCC
GITAALAYYAATGVFRPSAEPKDHREFYGPTVMVTATDARDFKSKYIDGNPTYDWKDFWG
HHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHCC
LSKGQIQYKA
CCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 8576032; 9401019; 10064713 [H]