| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162145921
Identifier: 162145921
GI number: 162145921
Start: 97697
End: 98380
Strand: Reverse
Name: 162145921
Synonym: GDI_0085
Alternate gene names: NA
Gene position: 98380-97697 (Counterclockwise)
Preceding gene: 162145926
Following gene: 162145919
Centisome position: 2.49
GC content: 62.43
Gene sequence:
>684_bases ATGTCGAAGCACATTCTTCACGTTGTCACCAATGTCGCCCACTACGATGACCCCTCCCACGCGACCGGTCTGTGGCTCTC GGAGCTTTCCCATGCCTGGGATGTATTCGCGGCCCGAAGATTCGAGCAGAGCCTCGTCAGCCCAAGGGGTGGCCGCGCAC CGCTGGAACCCCGTGCCCTGAAATGGCCATTGCTGGATGCCTCAGCCAGGGGGTGGCTGAACGACCCGGCGAGGATGGCA CTGCTGTCCACGACCGCGCGGCCGGACGACATCGACCCGGAGACATTCGATGCCATCTATTTCACGGGTGGCCACGGCGT CATGTGGGACTTTCCCCATAGCGCGGGGATTCAGGCCATCACGCGTAATCTTTGGGAGCGGGGCGGCATCGTCTCCGCCG TCTGCCACGGCTATTGTGGGCTGCTGAACACGCGGCTTTCCAATGGCAGCCTGCTGGTCGCCGGCAGGAAGATCACCGGT TTCTCATGGACAGAGGAAATCCTGGCCGGGGTGGCAAAAGAGATGCCCTATAATGCTGAAGCGCAGATGAAAGCCCGCGG CGCGCACTACGATAAAGCATTCCTGCCCTTCGTGCCCCACGTCGTCGCGGATGGTCGCCTGATCACCGGGCAGAATCCCG CCTCGGCCAAGGCCACGGCACGCAGGATTTCAGACCTGCTCTGA
Upstream 100 bases:
>100_bases GATTGAATGACTGCAAAAACCGCATGTCATCAAAGTGATCTCTTGACCCTCAAGCATGGTTGAACGTTACAGATGGCGCG GCGCATCACGAGGTACTGTC
Downstream 100 bases:
>100_bases AACCGGCGACGTGTCAGCACCGGCGCGTCTGGCCCGCGCCGCACCAGAGGGCTCGCGGGAAGCCATTGGCCTGGACCGGG GAGCGCTCCCTGTGCGGGCG
Product: DJ-1/PfpI family protein
Products: NA
Alternate protein names: ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; C56 Family Peptidase; Intracellular Protease/Amidase-Like; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; ThiJ Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSKHILHVVTNVAHYDDPSHATGLWLSELSHAWDVFAARRFEQSLVSPRGGRAPLEPRALKWPLLDASARGWLNDPARMA LLSTTARPDDIDPETFDAIYFTGGHGVMWDFPHSAGIQAITRNLWERGGIVSAVCHGYCGLLNTRLSNGSLLVAGRKITG FSWTEEILAGVAKEMPYNAEAQMKARGAHYDKAFLPFVPHVVADGRLITGQNPASAKATARRISDLL
Sequences:
>Translated_227_residues MSKHILHVVTNVAHYDDPSHATGLWLSELSHAWDVFAARRFEQSLVSPRGGRAPLEPRALKWPLLDASARGWLNDPARMA LLSTTARPDDIDPETFDAIYFTGGHGVMWDFPHSAGIQAITRNLWERGGIVSAVCHGYCGLLNTRLSNGSLLVAGRKITG FSWTEEILAGVAKEMPYNAEAQMKARGAHYDKAFLPFVPHVVADGRLITGQNPASAKATARRISDLL >Mature_226_residues SKHILHVVTNVAHYDDPSHATGLWLSELSHAWDVFAARRFEQSLVSPRGGRAPLEPRALKWPLLDASARGWLNDPARMAL LSTTARPDDIDPETFDAIYFTGGHGVMWDFPHSAGIQAITRNLWERGGIVSAVCHGYCGLLNTRLSNGSLLVAGRKITGF SWTEEILAGVAKEMPYNAEAQMKARGAHYDKAFLPFVPHVVADGRLITGQNPASAKATARRISDLL
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320742, Length=236, Percent_Identity=31.3559322033898, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6324967, Length=210, Percent_Identity=25.7142857142857, Blast_Score=81, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6324975, Length=210, Percent_Identity=25.7142857142857, Blast_Score=81, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6323984, Length=210, Percent_Identity=25.7142857142857, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24865; Mature: 24733
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHILHVVTNVAHYDDPSHATGLWLSELSHAWDVFAARRFEQSLVSPRGGRAPLEPRAL CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE KWPLLDASARGWLNDPARMALLSTTARPDDIDPETFDAIYFTGGHGVMWDFPHSAGIQAI ECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCHHHH TRNLWERGGIVSAVCHGYCGLLNTRLSNGSLLVAGRKITGFSWTEEILAGVAKEMPYNAE HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCCHHHHHHHHHHHHCCCCCC AQMKARGAHYDKAFLPFVPHVVADGRLITGQNPASAKATARRISDLL HHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure SKHILHVVTNVAHYDDPSHATGLWLSELSHAWDVFAARRFEQSLVSPRGGRAPLEPRAL CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE KWPLLDASARGWLNDPARMALLSTTARPDDIDPETFDAIYFTGGHGVMWDFPHSAGIQAI ECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCHHHH TRNLWERGGIVSAVCHGYCGLLNTRLSNGSLLVAGRKITGFSWTEEILAGVAKEMPYNAE HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCCHHHHHHHHHHHHCCCCCC AQMKARGAHYDKAFLPFVPHVVADGRLITGQNPASAKATARRISDLL HHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA