Click here to switch to the map view.

The map label for this gene is 162145901

Identifier: 162145901

GI number: 162145901

Start: 69832

End: 70503

Strand: Reverse

Name: 162145901

Synonym: GDI_0063

Alternate gene names: NA

Gene position: 70503-69832 (Counterclockwise)

Preceding gene: 162145904

Following gene: 162145900

Centisome position: 1.79

GC content: 65.18

Gene sequence:

>672_bases
ATGGGTATTCGACTCCATGTCTGGGGTGAACGCGCATGCTTTACGCGACCCGAACTGAAATCGGAGCGTGTGTCGTATGA
TGTCCTGACGCCATCGGCGGCGCGGGGCATCGTGGAAGCCATCCACTGGAAGCCGGCCATTCGCTGGCATATCGACCGCA
TCCATGTCCTGAAGCCGATCCGCTTCCAGTCGATCCGCCGGAACGAGGTCGGGGCCAAGGTGAGCGCCGTCCTCGCGGCC
CGGGCCATGACTGCTGGCCACACATCGGGCCTGGGCTTGGCGGTCGACGAGAATCGCCAGCAGCGGGCGGCGACGATCCT
GGTCGACGTAGCCTATGTCATCGAGGCGCACTTCACCCTGACGGCACGGGCCGGCGCGGGCGACACGGCGGCGAAGCATC
TGAGCATGTTCAACCGGCGGGCCACGCAGGGGCAATGTTTCCATCGCCCTTGCCTGGGAACGCGGGAATTTCCGGCGGAT
TTCGCATTGATTGCCGAGGAAGCTCCCCTGCCCGCCTCGGCGTTTCCGCCCGATCTGCAAGCGGTCGATCTGGGCTGGAT
GCTGCACGACATCGATTTCGCGGACCAGCGCACGCCGCGCTTTTTCCGTGCCTGCATCGAGAGCGGCGTGATTGCGGTGC
CGGCGGCCGACAGTCCGGACCTGATCGCATGA

Upstream 100 bases:

>100_bases
AGTTGTGCTTTGCGCCTCTCCGACCTGGAGAAGATAATCCCAAGTAACGCCTGTGGAATTGTCATAAGACAAACACCAGA
ACCAGACGGAGCCAGTCCTG

Downstream 100 bases:

>100_bases
CGATCCAGAAGCGTCCGGGCCCACTGGAAGCACTGGTCGATTTCTACGCCCGCATGGACGATGCCGAGGACCCTGGCTGG
GGGCGGGAGAAATTCGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Dvulg Subtype; CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Csd1 Family Protein; Cas5 Family CRISPR-Associated Protein; CRISPR-Associated Cas5d Family Protein; CRISPR-Associated RAMP Csd5d Family Protein; CRISPR-Associated D; CRISPR-Associated Protein Csd5d Family; CRISPR-Associated Protein; Crispr- Family

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MGIRLHVWGERACFTRPELKSERVSYDVLTPSAARGIVEAIHWKPAIRWHIDRIHVLKPIRFQSIRRNEVGAKVSAVLAA
RAMTAGHTSGLGLAVDENRQQRAATILVDVAYVIEAHFTLTARAGAGDTAAKHLSMFNRRATQGQCFHRPCLGTREFPAD
FALIAEEAPLPASAFPPDLQAVDLGWMLHDIDFADQRTPRFFRACIESGVIAVPAADSPDLIA

Sequences:

>Translated_223_residues
MGIRLHVWGERACFTRPELKSERVSYDVLTPSAARGIVEAIHWKPAIRWHIDRIHVLKPIRFQSIRRNEVGAKVSAVLAA
RAMTAGHTSGLGLAVDENRQQRAATILVDVAYVIEAHFTLTARAGAGDTAAKHLSMFNRRATQGQCFHRPCLGTREFPAD
FALIAEEAPLPASAFPPDLQAVDLGWMLHDIDFADQRTPRFFRACIESGVIAVPAADSPDLIA
>Mature_222_residues
GIRLHVWGERACFTRPELKSERVSYDVLTPSAARGIVEAIHWKPAIRWHIDRIHVLKPIRFQSIRRNEVGAKVSAVLAAR
AMTAGHTSGLGLAVDENRQQRAATILVDVAYVIEAHFTLTARAGAGDTAAKHLSMFNRRATQGQCFHRPCLGTREFPADF
ALIAEEAPLPASAFPPDLQAVDLGWMLHDIDFADQRTPRFFRACIESGVIAVPAADSPDLIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24539; Mature: 24408

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIRLHVWGERACFTRPELKSERVSYDVLTPSAARGIVEAIHWKPAIRWHIDRIHVLKPI
CCEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECEEEEECCH
RFQSIRRNEVGAKVSAVLAARAMTAGHTSGLGLAVDENRQQRAATILVDVAYVIEAHFTL
HHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHEEEEE
TARAGAGDTAAKHLSMFNRRATQGQCFHRPCLGTREFPADFALIAEEAPLPASAFPPDLQ
EEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCE
AVDLGWMLHDIDFADQRTPRFFRACIESGVIAVPAADSPDLIA
EEECCEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCC
>Mature Secondary Structure 
GIRLHVWGERACFTRPELKSERVSYDVLTPSAARGIVEAIHWKPAIRWHIDRIHVLKPI
CEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECEEEEECCH
RFQSIRRNEVGAKVSAVLAARAMTAGHTSGLGLAVDENRQQRAATILVDVAYVIEAHFTL
HHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHEEEEE
TARAGAGDTAAKHLSMFNRRATQGQCFHRPCLGTREFPADFALIAEEAPLPASAFPPDLQ
EEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCE
AVDLGWMLHDIDFADQRTPRFFRACIESGVIAVPAADSPDLIA
EEECCEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA