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The map label for this gene is 162145904

Identifier: 162145904

GI number: 162145904

Start: 71552

End: 73900

Strand: Reverse

Name: 162145904

Synonym: GDI_0066

Alternate gene names: NA

Gene position: 73900-71552 (Counterclockwise)

Preceding gene: 162145905

Following gene: 162145901

Centisome position: 1.87

GC content: 64.88

Gene sequence:

>2349_bases
ATGGATATCTTCGCTCATTCGCTCCCTGACGACCCCTCGACAGAACGATGGGAAACGTTGCGCGCGCATTCGCTGCGTGT
CGCGGCCCTGGCCGAGCAATTCGCCGCCGTGTTCGGCGCCGCGCACAAGGGCCGGGCGCTGGGGTTGCTGCATGATATCG
GGAAATGTTCGGCGGCCTACCAAGACTATATTCGTAAGCCCGGGCCGTGCCACGGACCTGACCACAGCACGGCGGGCGCC
CGCGCCGTGGTCGCGTCCTATGGACCGCTGGGACGGCTGCTGGCCTTTGCCATCGCGGGGCACCATTCCGGCCTGATGGA
CGGGTCGGGCCATGACGGCCCCGGACGGTCGCTGAACGAACGCCTGGACGAGCAGGCTTATGCCGTTCCGGCCTCGGACA
ATTGGCCGGACTATTGTCCCGCGCGGCCGACCCTGCAGGATCTGGTGGACGAGTCGCCGCCGGTCGCCAGCACGGATTAT
CCGGGATTCGCGACCTCGTTTTTCGTCCGCATGCTGTTTTCCTGCCTGACGGATGCCGATTTCATCGCCACCGAAGGATA
TTACGCGGAATCGGCAGGATTGCCGCCACCCGCGCGCGGCGGAACGATCACCCAGGCCCATCTGGATGCCATCCGACGGT
TCATGAAGACACGGCGGCGGGACGATACACCGCTGAACCGGCTGCGCAGCCGGATTCTGGACCATGCGATCGGCAAGGCC
GCCCTCGGACCCGGCCTGTTCACGATGACGGTCCCTACAGGCGGGGGCAAGACGCTCGCCTCGCTCAGCTTTGCACTGGA
CCATGCGGTGCGGCATGGGCTGCGCCGCGTGATCTATGTGATCCCGTTCACATCGATCATCGAGCAGACGGCGACGGTGT
TTCGCGAGGCTCTGGGTACGACGGACGGCATCCTGGAACATCATTCGAATTTCGACTGGGACCGACGCGCGCCGGCCGGC
GAGAACGACGAGGAAGCCGAAGGCGCTGACGGCCTGGCGAAATTACGGCGCGACGCGGAAAACTGGGACGCACCCATTAT
CGTCACGACCAGCGTGCAGTTCTTCGAATCGCTGTTCGCGGCACGGGGCAGCCAGGCCCGCAAGTTGCACAACATTGCAG
GCAGCGTGATCATCCTGGACGAGGTGCAGACGCTGCCGCTGCATCTACTGCGCCCCTGCCTCGCGGTCCTGGACGAACTG
GCCCGCAATTACGGCGTGAGCATCGTGCTGTGTACCGCCACGCAATCCGCCCTGCGGCAGATCGACGACGCGTTGCCGCC
TGGGCGAAAGGGACGCCGGGCGGGGCTGGATATCCAAGACACGCACGAACTAGCCCCCGAACCCGCAGCGCTCTATGACG
CGCTGCGCCGCGCTACCGTCACCTGGCGCAAGGAACCGGTATCCGACGGCGAGATCGCCGCGCGTTTCGCGGTGCGCGAA
CAGATGCTGTGCATCGTCAATACCAGGGCGCACGCGCATGATCTGTTCACCGCCATTGCCGATCAGGACGGTGCACGGCA
CCTGACAACGCTGATGTGCCCGCTCCATCGGCGCGCCACCCTGGTAGCCATACGCCAGGATCTGAAAAACGGACGGCCTG
TCCGGCTGGTCTCCACCAGCCTGATCGAAGCCGGTGTCGATGTCGATTTCCCCGAGGTCTGGCGGGAAGCCACCGGATTA
TCCTCGATCACGCAGGCCGCCGGACGATGCAATCGCGAGGGCCGCCTGGACGAGCCAGGCCCGGTGGTGGTGTTCGAGAC
GCCTGACCCTGCCGACCCCACGCAGCCATGGCTTGTGCGTGCCATGCGCCCCTTCTGGCAGGCCACGCGTCCGATCCTGC
GCCAGGGACTGGACCCGCTGAGCCTGGAAGCCATTCATGCCTATTTCCGCGAACTGTATTTCCAACATAGCCATGACACG
CACGGACACGACGGCCTGGACGCCGCGCGGATCGGCACCGTGCGCTACGCAATCCTGGAGGCCATCGCGCAATCGGGTGC
CGGCCACACCTATCCGTATGCCACGATTGCACGGGCCTTCCGCATGATCGACACGGTCATGGAGTCCGTCATCATCCCGT
GGGACGAAACCGTACGGCAAATGCTGCATGCCCTTGACCACGCACCCGTCCCACCGGCCGGATTCATGCGGCGCCTGCAA
CAATACTGCGTGCCGGTCCCCGCGCCCATCCGGCTGAAATTGCTGGCCGCCGGCGCCCTGCGCACCGTCAAGCCCGAAGC
GTATGGCGACCGGTTCGTCTACCTGGAATCAATGGATCTTTACGATGCCCGCCGGGGTCTGAAACTGGATGATCCCACGT
TCCGCCATGCGGAAAGCAATGTGTGGTAG

Upstream 100 bases:

>100_bases
GGAAGTGCCGCATTTCCACGTCCACCTGTTCGGCGGCGCCGCGCTGGGGCCGATGCTGCAGCACGGCTGACGGGCGACAC
CGGCGGGAGGCCCGCTCGTC

Downstream 100 bases:

>100_bases
ACAGCGGTTTCCGGCCGGGACACGGCCGGAAACCGCCCGATATCCGCATCCTGCGCATCACAGAAAACGTTTCAATCCAC
GCTTCGGGTAAAGCGACCAA

Product: helicase protein

Products: NA

Alternate protein names: CRISPR-Associated Helicase Cas3 Family Protein Protein; Helicase; CRISPR-Associated Helicase Cas3 Domain Protein; CRISPR-Associated HD Domain Protein; ATP-Dependent RNA Helicase; CRISPR-Associated Helicase; CRISPR-Associated Helicase Cas3 Domain-Containing Protein; DEAD/DEAH Box Helicase Domain-Containing Protein; Crispr-Associated Hd Domain Protein; CRISPR-Associated Helicase Cas3 Core; CRISPR-Associated Helicase Cas3 Family; Helicase-Like Protein; Crispr-Associated Helicase Cas3 Domain Protein; Helicases; Cas3 Family CRISPR-Associated Helicase; Helicases-Like Protein; CRISPR-Associated Helicase Cas3 Protein; CRISPR-Associated HD Domain-Containing Protein; ATP-Dependent RNA Helicase SrmB

Number of amino acids: Translated: 782; Mature: 782

Protein sequence:

>782_residues
MDIFAHSLPDDPSTERWETLRAHSLRVAALAEQFAAVFGAAHKGRALGLLHDIGKCSAAYQDYIRKPGPCHGPDHSTAGA
RAVVASYGPLGRLLAFAIAGHHSGLMDGSGHDGPGRSLNERLDEQAYAVPASDNWPDYCPARPTLQDLVDESPPVASTDY
PGFATSFFVRMLFSCLTDADFIATEGYYAESAGLPPPARGGTITQAHLDAIRRFMKTRRRDDTPLNRLRSRILDHAIGKA
ALGPGLFTMTVPTGGGKTLASLSFALDHAVRHGLRRVIYVIPFTSIIEQTATVFREALGTTDGILEHHSNFDWDRRAPAG
ENDEEAEGADGLAKLRRDAENWDAPIIVTTSVQFFESLFAARGSQARKLHNIAGSVIILDEVQTLPLHLLRPCLAVLDEL
ARNYGVSIVLCTATQSALRQIDDALPPGRKGRRAGLDIQDTHELAPEPAALYDALRRATVTWRKEPVSDGEIAARFAVRE
QMLCIVNTRAHAHDLFTAIADQDGARHLTTLMCPLHRRATLVAIRQDLKNGRPVRLVSTSLIEAGVDVDFPEVWREATGL
SSITQAAGRCNREGRLDEPGPVVVFETPDPADPTQPWLVRAMRPFWQATRPILRQGLDPLSLEAIHAYFRELYFQHSHDT
HGHDGLDAARIGTVRYAILEAIAQSGAGHTYPYATIARAFRMIDTVMESVIIPWDETVRQMLHALDHAPVPPAGFMRRLQ
QYCVPVPAPIRLKLLAAGALRTVKPEAYGDRFVYLESMDLYDARRGLKLDDPTFRHAESNVW

Sequences:

>Translated_782_residues
MDIFAHSLPDDPSTERWETLRAHSLRVAALAEQFAAVFGAAHKGRALGLLHDIGKCSAAYQDYIRKPGPCHGPDHSTAGA
RAVVASYGPLGRLLAFAIAGHHSGLMDGSGHDGPGRSLNERLDEQAYAVPASDNWPDYCPARPTLQDLVDESPPVASTDY
PGFATSFFVRMLFSCLTDADFIATEGYYAESAGLPPPARGGTITQAHLDAIRRFMKTRRRDDTPLNRLRSRILDHAIGKA
ALGPGLFTMTVPTGGGKTLASLSFALDHAVRHGLRRVIYVIPFTSIIEQTATVFREALGTTDGILEHHSNFDWDRRAPAG
ENDEEAEGADGLAKLRRDAENWDAPIIVTTSVQFFESLFAARGSQARKLHNIAGSVIILDEVQTLPLHLLRPCLAVLDEL
ARNYGVSIVLCTATQSALRQIDDALPPGRKGRRAGLDIQDTHELAPEPAALYDALRRATVTWRKEPVSDGEIAARFAVRE
QMLCIVNTRAHAHDLFTAIADQDGARHLTTLMCPLHRRATLVAIRQDLKNGRPVRLVSTSLIEAGVDVDFPEVWREATGL
SSITQAAGRCNREGRLDEPGPVVVFETPDPADPTQPWLVRAMRPFWQATRPILRQGLDPLSLEAIHAYFRELYFQHSHDT
HGHDGLDAARIGTVRYAILEAIAQSGAGHTYPYATIARAFRMIDTVMESVIIPWDETVRQMLHALDHAPVPPAGFMRRLQ
QYCVPVPAPIRLKLLAAGALRTVKPEAYGDRFVYLESMDLYDARRGLKLDDPTFRHAESNVW
>Mature_782_residues
MDIFAHSLPDDPSTERWETLRAHSLRVAALAEQFAAVFGAAHKGRALGLLHDIGKCSAAYQDYIRKPGPCHGPDHSTAGA
RAVVASYGPLGRLLAFAIAGHHSGLMDGSGHDGPGRSLNERLDEQAYAVPASDNWPDYCPARPTLQDLVDESPPVASTDY
PGFATSFFVRMLFSCLTDADFIATEGYYAESAGLPPPARGGTITQAHLDAIRRFMKTRRRDDTPLNRLRSRILDHAIGKA
ALGPGLFTMTVPTGGGKTLASLSFALDHAVRHGLRRVIYVIPFTSIIEQTATVFREALGTTDGILEHHSNFDWDRRAPAG
ENDEEAEGADGLAKLRRDAENWDAPIIVTTSVQFFESLFAARGSQARKLHNIAGSVIILDEVQTLPLHLLRPCLAVLDEL
ARNYGVSIVLCTATQSALRQIDDALPPGRKGRRAGLDIQDTHELAPEPAALYDALRRATVTWRKEPVSDGEIAARFAVRE
QMLCIVNTRAHAHDLFTAIADQDGARHLTTLMCPLHRRATLVAIRQDLKNGRPVRLVSTSLIEAGVDVDFPEVWREATGL
SSITQAAGRCNREGRLDEPGPVVVFETPDPADPTQPWLVRAMRPFWQATRPILRQGLDPLSLEAIHAYFRELYFQHSHDT
HGHDGLDAARIGTVRYAILEAIAQSGAGHTYPYATIARAFRMIDTVMESVIIPWDETVRQMLHALDHAPVPPAGFMRRLQ
QYCVPVPAPIRLKLLAAGALRTVKPEAYGDRFVYLESMDLYDARRGLKLDDPTFRHAESNVW

Specific function: Unknown

COG id: COG1203

COG function: function code R; Predicted helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86069; Mature: 86069

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFAHSLPDDPSTERWETLRAHSLRVAALAEQFAAVFGAAHKGRALGLLHDIGKCSAAY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QDYIRKPGPCHGPDHSTAGARAVVASYGPLGRLLAFAIAGHHSGLMDGSGHDGPGRSLNE
HHHHCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
RLDEQAYAVPASDNWPDYCPARPTLQDLVDESPPVASTDYPGFATSFFVRMLFSCLTDAD
HHHHHHEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
FIATEGYYAESAGLPPPARGGTITQAHLDAIRRFMKTRRRDDTPLNRLRSRILDHAIGKA
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ALGPGLFTMTVPTGGGKTLASLSFALDHAVRHGLRRVIYVIPFTSIIEQTATVFREALGT
HCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TDGILEHHSNFDWDRRAPAGENDEEAEGADGLAKLRRDAENWDAPIIVTTSVQFFESLFA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH
ARGSQARKLHNIAGSVIILDEVQTLPLHLLRPCLAVLDELARNYGVSIVLCTATQSALRQ
HCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH
IDDALPPGRKGRRAGLDIQDTHELAPEPAALYDALRRATVTWRKEPVSDGEIAARFAVRE
HHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QMLCIVNTRAHAHDLFTAIADQDGARHLTTLMCPLHRRATLVAIRQDLKNGRPVRLVSTS
HHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
LIEAGVDVDFPEVWREATGLSSITQAAGRCNREGRLDEPGPVVVFETPDPADPTQPWLVR
HHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHH
AMRPFWQATRPILRQGLDPLSLEAIHAYFRELYFQHSHDTHGHDGLDAARIGTVRYAILE
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
AIAQSGAGHTYPYATIARAFRMIDTVMESVIIPWDETVRQMLHALDHAPVPPAGFMRRLQ
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
QYCVPVPAPIRLKLLAAGALRTVKPEAYGDRFVYLESMDLYDARRGLKLDDPTFRHAESN
HHCCCCCCCCEEEEEEHHHHHHCCCHHCCCEEEEEECCHHHHHHCCCCCCCCCHHCCCCC
VW
CC
>Mature Secondary Structure
MDIFAHSLPDDPSTERWETLRAHSLRVAALAEQFAAVFGAAHKGRALGLLHDIGKCSAAY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QDYIRKPGPCHGPDHSTAGARAVVASYGPLGRLLAFAIAGHHSGLMDGSGHDGPGRSLNE
HHHHCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
RLDEQAYAVPASDNWPDYCPARPTLQDLVDESPPVASTDYPGFATSFFVRMLFSCLTDAD
HHHHHHEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
FIATEGYYAESAGLPPPARGGTITQAHLDAIRRFMKTRRRDDTPLNRLRSRILDHAIGKA
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ALGPGLFTMTVPTGGGKTLASLSFALDHAVRHGLRRVIYVIPFTSIIEQTATVFREALGT
HCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TDGILEHHSNFDWDRRAPAGENDEEAEGADGLAKLRRDAENWDAPIIVTTSVQFFESLFA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH
ARGSQARKLHNIAGSVIILDEVQTLPLHLLRPCLAVLDELARNYGVSIVLCTATQSALRQ
HCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH
IDDALPPGRKGRRAGLDIQDTHELAPEPAALYDALRRATVTWRKEPVSDGEIAARFAVRE
HHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QMLCIVNTRAHAHDLFTAIADQDGARHLTTLMCPLHRRATLVAIRQDLKNGRPVRLVSTS
HHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
LIEAGVDVDFPEVWREATGLSSITQAAGRCNREGRLDEPGPVVVFETPDPADPTQPWLVR
HHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHH
AMRPFWQATRPILRQGLDPLSLEAIHAYFRELYFQHSHDTHGHDGLDAARIGTVRYAILE
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
AIAQSGAGHTYPYATIARAFRMIDTVMESVIIPWDETVRQMLHALDHAPVPPAGFMRRLQ
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
QYCVPVPAPIRLKLLAAGALRTVKPEAYGDRFVYLESMDLYDARRGLKLDDPTFRHAESN
HHCCCCCCCCEEEEEEHHHHHHCCCHHCCCEEEEEECCHHHHHHCCCCCCCCCHHCCCCC
VW
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA