Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is yiiP [C]

Identifier: 162145861

GI number: 162145861

Start: 18821

End: 19945

Strand: Direct

Name: yiiP [C]

Synonym: GDI_0019

Alternate gene names: 162145861

Gene position: 18821-19945 (Clockwise)

Preceding gene: 162145858

Following gene: 162145863

Centisome position: 0.48

GC content: 66.49

Gene sequence:

>1125_bases
TTGAAACAGTTTCTTATAAAATGCGTCCCGACCGGCCTGCAACATCCGCCGGCATCAACGCGGCTCGCCCCCTTCGGCGT
GGCCATGATCCGGTCTATGGTTTCATCCCCTGCCCGGCCTGGAGCGTTCATGGCTGCCTCCTCTTCCCGTTTCGTGATCT
ATGCCGCCCTGTCGGGCAACCTGCTGATCGCCATCGTCAAGTTCGCCGCCGCCGCATTGACCGGCAGCGCCGCGATGCTG
AGCGAGGCCATTCATTCGCTGATCGATACCGGCAACCAGGTTCTGCTGCTGGTCGGCCTGCGCCGCGCCGCCCGGCCGGC
GACGCCGCTGCATCCGTTCGGGTACGGGCTGGAGCTGTATTTCTGGACCTTCGTGGTGGCGTTGCTGATCTTCGGGGTCG
GCGCCGGGGTGTCGATCTTCGAGGGGGTCAGCAAGATCCGCCATCCCCATCCGGTGGACCATGCGGTGGTCAATTATGTC
GTGCTGGGCCTCGCTATCCTGTTCGAGGGCGCGGTCTGGCTGACCGCGCTGCGGGAATTCCGCCGCCACGGCAAGGGGCG
ACGGGGCTGGATCGAGGCCGTGCGCCATAGCAAGGACCCCACCGTCTTCACCGTCCTGTTCGAGGACACGGCCGCCCTGT
GCGGGCTGGGGGTCGCGCTGCTGGGCACGATCCTGTCGGAATGGCTTGGCCAGCCGATGCTGGACGGAGTGGCGTCGGTG
CTGATCGGCGTGATCCTGACGCTGACCGCCGCCGTCCTGGCGTGGGAAACCCAGTCCCTGCTGACCGGCGAGGGCATGGC
GGCCGAGGGCCTGGCGCGCATCCGCGCCATCGCCCTGGCCGAACCGGGCGTGCTGGGCATGAACGAGATCCGCTCGATGC
ATTTCGGGCCGTCCGACGTGCTGGTGGCGATCAGCCTGGATTTCGATGACGGGCAGAGCGCGGGCCACGTGGAACGCAGC
GTCTCGCGTATCGAGGACCGCATCCGCGCGGCCTTCCCCGAGGTCAGCCATGTGTTCATCGAGGCGCAGGATGCGTCGTC
CCGGCGGGCCAGGGGGCAGCCGTCACCGGATCTGGGGATGATCTCTTCCTTTTCCTCGGAAAAGGAACGTCCTATTCCCC
GGTAA

Upstream 100 bases:

>100_bases
AAGGCCGCTCCGCTCCGGTGCTCAAAAACACACGCCGGACGCGGCCGAAGGGCCGCTCTCGCTCACCAGCCCACATTTTC
AATCAGGCTCTTGGAGGCGT

Downstream 100 bases:

>100_bases
CGAAGGCCCCCACCGGATACCCCTGCGCGAACAGCAGCGTCCGCAGGGTGGTATGATCCACCCGGTTGCCGATCGCGGTA
CGCACGATCGGCTTGCCGTG

Product: cation transporter protein

Products: NA

Alternate protein names: Cation Efflux Family Protein; Cation Transporter; Cation Efflux Protein; Integral Membrane Protein; Membrane Transporter; Co/Zn/Cd Cation Transporter; Cation Diffusion Facilitator Family Protein; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; CDF Family Transporter; Cation Transporter Permease Component; Cation-Efflux Pump; Cation Efflux Transporter; CDF Family Heavy Metal/H(+) Antiporter; Zinc/Cadmium/Cations Transporter; CDF Family Cation Efflux Protein; Cation Transporter Protein; Cation Efflux System

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKQFLIKCVPTGLQHPPASTRLAPFGVAMIRSMVSSPARPGAFMAASSSRFVIYAALSGNLLIAIVKFAAAALTGSAAML
SEAIHSLIDTGNQVLLLVGLRRAARPATPLHPFGYGLELYFWTFVVALLIFGVGAGVSIFEGVSKIRHPHPVDHAVVNYV
VLGLAILFEGAVWLTALREFRRHGKGRRGWIEAVRHSKDPTVFTVLFEDTAALCGLGVALLGTILSEWLGQPMLDGVASV
LIGVILTLTAAVLAWETQSLLTGEGMAAEGLARIRAIALAEPGVLGMNEIRSMHFGPSDVLVAISLDFDDGQSAGHVERS
VSRIEDRIRAAFPEVSHVFIEAQDASSRRARGQPSPDLGMISSFSSEKERPIPR

Sequences:

>Translated_374_residues
MKQFLIKCVPTGLQHPPASTRLAPFGVAMIRSMVSSPARPGAFMAASSSRFVIYAALSGNLLIAIVKFAAAALTGSAAML
SEAIHSLIDTGNQVLLLVGLRRAARPATPLHPFGYGLELYFWTFVVALLIFGVGAGVSIFEGVSKIRHPHPVDHAVVNYV
VLGLAILFEGAVWLTALREFRRHGKGRRGWIEAVRHSKDPTVFTVLFEDTAALCGLGVALLGTILSEWLGQPMLDGVASV
LIGVILTLTAAVLAWETQSLLTGEGMAAEGLARIRAIALAEPGVLGMNEIRSMHFGPSDVLVAISLDFDDGQSAGHVERS
VSRIEDRIRAAFPEVSHVFIEAQDASSRRARGQPSPDLGMISSFSSEKERPIPR
>Mature_374_residues
MKQFLIKCVPTGLQHPPASTRLAPFGVAMIRSMVSSPARPGAFMAASSSRFVIYAALSGNLLIAIVKFAAAALTGSAAML
SEAIHSLIDTGNQVLLLVGLRRAARPATPLHPFGYGLELYFWTFVVALLIFGVGAGVSIFEGVSKIRHPHPVDHAVVNYV
VLGLAILFEGAVWLTALREFRRHGKGRRGWIEAVRHSKDPTVFTVLFEDTAALCGLGVALLGTILSEWLGQPMLDGVASV
LIGVILTLTAAVLAWETQSLLTGEGMAAEGLARIRAIALAEPGVLGMNEIRSMHFGPSDVLVAISLDFDDGQSAGHVERS
VSRIEDRIRAAFPEVSHVFIEAQDASSRRARGQPSPDLGMISSFSSEKERPIPR

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI57164948, Length=259, Percent_Identity=32.4324324324324, Blast_Score=152, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI115534117, Length=259, Percent_Identity=33.5907335907336, Blast_Score=150, Evalue=9e-37,
Organism=Drosophila melanogaster, GI24653141, Length=306, Percent_Identity=29.0849673202614, Blast_Score=134, Evalue=9e-32,
Organism=Drosophila melanogaster, GI24653143, Length=306, Percent_Identity=29.0849673202614, Blast_Score=134, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39991; Mature: 39991

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFLIKCVPTGLQHPPASTRLAPFGVAMIRSMVSSPARPGAFMAASSSRFVIYAALSGN
CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCC
LLIAIVKFAAAALTGSAAMLSEAIHSLIDTGNQVLLLVGLRRAARPATPLHPFGYGLELY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHH
FWTFVVALLIFGVGAGVSIFEGVSKIRHPHPVDHAVVNYVVLGLAILFEGAVWLTALREF
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRHGKGRRGWIEAVRHSKDPTVFTVLFEDTAALCGLGVALLGTILSEWLGQPMLDGVASV
HHHCCCCHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LIGVILTLTAAVLAWETQSLLTGEGMAAEGLARIRAIALAEPGVLGMNEIRSMHFGPSDV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCE
LVAISLDFDDGQSAGHVERSVSRIEDRIRAAFPEVSHVFIEAQDASSRRARGQPSPDLGM
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCHHCCCCCCCCHHH
ISSFSSEKERPIPR
HHHCCCCCCCCCCC
>Mature Secondary Structure
MKQFLIKCVPTGLQHPPASTRLAPFGVAMIRSMVSSPARPGAFMAASSSRFVIYAALSGN
CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCC
LLIAIVKFAAAALTGSAAMLSEAIHSLIDTGNQVLLLVGLRRAARPATPLHPFGYGLELY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHH
FWTFVVALLIFGVGAGVSIFEGVSKIRHPHPVDHAVVNYVVLGLAILFEGAVWLTALREF
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRHGKGRRGWIEAVRHSKDPTVFTVLFEDTAALCGLGVALLGTILSEWLGQPMLDGVASV
HHHCCCCHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LIGVILTLTAAVLAWETQSLLTGEGMAAEGLARIRAIALAEPGVLGMNEIRSMHFGPSDV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCE
LVAISLDFDDGQSAGHVERSVSRIEDRIRAAFPEVSHVFIEAQDASSRRARGQPSPDLGM
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCHHCCCCCCCCHHH
ISSFSSEKERPIPR
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA