| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yiiP [C]
Identifier: 162145861
GI number: 162145861
Start: 18821
End: 19945
Strand: Direct
Name: yiiP [C]
Synonym: GDI_0019
Alternate gene names: 162145861
Gene position: 18821-19945 (Clockwise)
Preceding gene: 162145858
Following gene: 162145863
Centisome position: 0.48
GC content: 66.49
Gene sequence:
>1125_bases TTGAAACAGTTTCTTATAAAATGCGTCCCGACCGGCCTGCAACATCCGCCGGCATCAACGCGGCTCGCCCCCTTCGGCGT GGCCATGATCCGGTCTATGGTTTCATCCCCTGCCCGGCCTGGAGCGTTCATGGCTGCCTCCTCTTCCCGTTTCGTGATCT ATGCCGCCCTGTCGGGCAACCTGCTGATCGCCATCGTCAAGTTCGCCGCCGCCGCATTGACCGGCAGCGCCGCGATGCTG AGCGAGGCCATTCATTCGCTGATCGATACCGGCAACCAGGTTCTGCTGCTGGTCGGCCTGCGCCGCGCCGCCCGGCCGGC GACGCCGCTGCATCCGTTCGGGTACGGGCTGGAGCTGTATTTCTGGACCTTCGTGGTGGCGTTGCTGATCTTCGGGGTCG GCGCCGGGGTGTCGATCTTCGAGGGGGTCAGCAAGATCCGCCATCCCCATCCGGTGGACCATGCGGTGGTCAATTATGTC GTGCTGGGCCTCGCTATCCTGTTCGAGGGCGCGGTCTGGCTGACCGCGCTGCGGGAATTCCGCCGCCACGGCAAGGGGCG ACGGGGCTGGATCGAGGCCGTGCGCCATAGCAAGGACCCCACCGTCTTCACCGTCCTGTTCGAGGACACGGCCGCCCTGT GCGGGCTGGGGGTCGCGCTGCTGGGCACGATCCTGTCGGAATGGCTTGGCCAGCCGATGCTGGACGGAGTGGCGTCGGTG CTGATCGGCGTGATCCTGACGCTGACCGCCGCCGTCCTGGCGTGGGAAACCCAGTCCCTGCTGACCGGCGAGGGCATGGC GGCCGAGGGCCTGGCGCGCATCCGCGCCATCGCCCTGGCCGAACCGGGCGTGCTGGGCATGAACGAGATCCGCTCGATGC ATTTCGGGCCGTCCGACGTGCTGGTGGCGATCAGCCTGGATTTCGATGACGGGCAGAGCGCGGGCCACGTGGAACGCAGC GTCTCGCGTATCGAGGACCGCATCCGCGCGGCCTTCCCCGAGGTCAGCCATGTGTTCATCGAGGCGCAGGATGCGTCGTC CCGGCGGGCCAGGGGGCAGCCGTCACCGGATCTGGGGATGATCTCTTCCTTTTCCTCGGAAAAGGAACGTCCTATTCCCC GGTAA
Upstream 100 bases:
>100_bases AAGGCCGCTCCGCTCCGGTGCTCAAAAACACACGCCGGACGCGGCCGAAGGGCCGCTCTCGCTCACCAGCCCACATTTTC AATCAGGCTCTTGGAGGCGT
Downstream 100 bases:
>100_bases CGAAGGCCCCCACCGGATACCCCTGCGCGAACAGCAGCGTCCGCAGGGTGGTATGATCCACCCGGTTGCCGATCGCGGTA CGCACGATCGGCTTGCCGTG
Product: cation transporter protein
Products: NA
Alternate protein names: Cation Efflux Family Protein; Cation Transporter; Cation Efflux Protein; Integral Membrane Protein; Membrane Transporter; Co/Zn/Cd Cation Transporter; Cation Diffusion Facilitator Family Protein; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; CDF Family Transporter; Cation Transporter Permease Component; Cation-Efflux Pump; Cation Efflux Transporter; CDF Family Heavy Metal/H(+) Antiporter; Zinc/Cadmium/Cations Transporter; CDF Family Cation Efflux Protein; Cation Transporter Protein; Cation Efflux System
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKQFLIKCVPTGLQHPPASTRLAPFGVAMIRSMVSSPARPGAFMAASSSRFVIYAALSGNLLIAIVKFAAAALTGSAAML SEAIHSLIDTGNQVLLLVGLRRAARPATPLHPFGYGLELYFWTFVVALLIFGVGAGVSIFEGVSKIRHPHPVDHAVVNYV VLGLAILFEGAVWLTALREFRRHGKGRRGWIEAVRHSKDPTVFTVLFEDTAALCGLGVALLGTILSEWLGQPMLDGVASV LIGVILTLTAAVLAWETQSLLTGEGMAAEGLARIRAIALAEPGVLGMNEIRSMHFGPSDVLVAISLDFDDGQSAGHVERS VSRIEDRIRAAFPEVSHVFIEAQDASSRRARGQPSPDLGMISSFSSEKERPIPR
Sequences:
>Translated_374_residues MKQFLIKCVPTGLQHPPASTRLAPFGVAMIRSMVSSPARPGAFMAASSSRFVIYAALSGNLLIAIVKFAAAALTGSAAML SEAIHSLIDTGNQVLLLVGLRRAARPATPLHPFGYGLELYFWTFVVALLIFGVGAGVSIFEGVSKIRHPHPVDHAVVNYV VLGLAILFEGAVWLTALREFRRHGKGRRGWIEAVRHSKDPTVFTVLFEDTAALCGLGVALLGTILSEWLGQPMLDGVASV LIGVILTLTAAVLAWETQSLLTGEGMAAEGLARIRAIALAEPGVLGMNEIRSMHFGPSDVLVAISLDFDDGQSAGHVERS VSRIEDRIRAAFPEVSHVFIEAQDASSRRARGQPSPDLGMISSFSSEKERPIPR >Mature_374_residues MKQFLIKCVPTGLQHPPASTRLAPFGVAMIRSMVSSPARPGAFMAASSSRFVIYAALSGNLLIAIVKFAAAALTGSAAML SEAIHSLIDTGNQVLLLVGLRRAARPATPLHPFGYGLELYFWTFVVALLIFGVGAGVSIFEGVSKIRHPHPVDHAVVNYV VLGLAILFEGAVWLTALREFRRHGKGRRGWIEAVRHSKDPTVFTVLFEDTAALCGLGVALLGTILSEWLGQPMLDGVASV LIGVILTLTAAVLAWETQSLLTGEGMAAEGLARIRAIALAEPGVLGMNEIRSMHFGPSDVLVAISLDFDDGQSAGHVERS VSRIEDRIRAAFPEVSHVFIEAQDASSRRARGQPSPDLGMISSFSSEKERPIPR
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI57164948, Length=259, Percent_Identity=32.4324324324324, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI115534117, Length=259, Percent_Identity=33.5907335907336, Blast_Score=150, Evalue=9e-37, Organism=Drosophila melanogaster, GI24653141, Length=306, Percent_Identity=29.0849673202614, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI24653143, Length=306, Percent_Identity=29.0849673202614, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39991; Mature: 39991
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFLIKCVPTGLQHPPASTRLAPFGVAMIRSMVSSPARPGAFMAASSSRFVIYAALSGN CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCC LLIAIVKFAAAALTGSAAMLSEAIHSLIDTGNQVLLLVGLRRAARPATPLHPFGYGLELY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHH FWTFVVALLIFGVGAGVSIFEGVSKIRHPHPVDHAVVNYVVLGLAILFEGAVWLTALREF HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRHGKGRRGWIEAVRHSKDPTVFTVLFEDTAALCGLGVALLGTILSEWLGQPMLDGVASV HHHCCCCHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LIGVILTLTAAVLAWETQSLLTGEGMAAEGLARIRAIALAEPGVLGMNEIRSMHFGPSDV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCE LVAISLDFDDGQSAGHVERSVSRIEDRIRAAFPEVSHVFIEAQDASSRRARGQPSPDLGM EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCHHCCCCCCCCHHH ISSFSSEKERPIPR HHHCCCCCCCCCCC >Mature Secondary Structure MKQFLIKCVPTGLQHPPASTRLAPFGVAMIRSMVSSPARPGAFMAASSSRFVIYAALSGN CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCC LLIAIVKFAAAALTGSAAMLSEAIHSLIDTGNQVLLLVGLRRAARPATPLHPFGYGLELY HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHH FWTFVVALLIFGVGAGVSIFEGVSKIRHPHPVDHAVVNYVVLGLAILFEGAVWLTALREF HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRHGKGRRGWIEAVRHSKDPTVFTVLFEDTAALCGLGVALLGTILSEWLGQPMLDGVASV HHHCCCCHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LIGVILTLTAAVLAWETQSLLTGEGMAAEGLARIRAIALAEPGVLGMNEIRSMHFGPSDV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCE LVAISLDFDDGQSAGHVERSVSRIEDRIRAAFPEVSHVFIEAQDASSRRARGQPSPDLGM EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCHHCCCCCCCCHHH ISSFSSEKERPIPR HHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA