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The map label for this gene is ylbK [H]

Identifier: 161871002

GI number: 161871002

Start: 2133462

End: 2134355

Strand: Reverse

Name: ylbK [H]

Synonym: NMCC_2098

Alternate gene names: 161871002

Gene position: 2134355-2133462 (Counterclockwise)

Preceding gene: 161871010

Following gene: 161871001

Centisome position: 99.11

GC content: 53.91

Gene sequence:

>894_bases
ATGGTAACGTTTTCAAAAATCAGACCGCTTTTGGCAATCGCCGCCGCCGCGTTGCTTGCCGCCTGCGGCACGGCGGGAAA
TAATGCTGCCCGCAAGCCGGTGCAAACCGCCAAACCCGCCGCAGTGGTCGGTTTGGCACTCGGTGGCGGCGCATCTAAAG
GATTTGCCCATGTAGGTATTATTAAGGTTTTGAAAGAAAACGGTATTCCTGTGAAGGTGGTTACCGGCACATCGGCAGGT
TCGATAGTCGGCAGCCTTTTTGCATCGGGTATGTCGCCCGACCGCCTCGAATTGGAAGCCGAAATTTTAGGTAAAACCGA
TTTGGTCGATTTAACCTTGTCCACCAGTGGTTTTATCAAAGGCGAAAAGCTGCAAAATTACATCAACCGAAAAGTCGGCG
GCAGGCGGATTCAGCAGTTTCCCATCAAATTTGCCGCCGTTGCTACTGATTTTGAAACCGGCAAGGCCGTCGCTTTCAAT
CAAGGGAATGCCGGGCAGGCTGTGCGCGCTTCCGCCGCCATTCCCAATGTGTTCCAACCCGTTATCATCGGCAGGCATAC
ATATGTTGACGGCGGTCTGTCGCAGCCCGTGCCCGTCAGTGCCGCCCGGCGGCAGGGGGCGAATTTCGTGATTGCCGTCG
ATATTTCCGCCCGTCCGAGCAAAAACATCAGCCAAGGCTTCTTCTCTTATCTCGATCAGACGCTGAACGTAATGAGCGTT
TCCGCGTTGCAAAATGAGTTGGGGCAGGCGGATGTGGTTATCAAACCGCAGGTTTTGGATTTGGGTGCAGTCGGCGGATT
CGATCAGAAAAAACGTGCCATCCAGTTGGGTGAGGAGGCAGCACGTGCCGCATTGCCTGAAATCAAACGCAAACTGGCGG
CATACCGTTATTGA

Upstream 100 bases:

>100_bases
TGACTTAACAAAGCCCCCATTTGCTTGGCTGTCAAAGGGGGTTGTTAAGAAAAGCAATCCCTCTTTTTGACGGGGTGCGA
TATATAAAGGAATGGAAAAT

Downstream 100 bases:

>100_bases
CGCTATGCCGTCCGAACGTGTTTCTAGAAGGCTTTATCCATAGAAAAAAATACCCGAATCCCGTACAATACGCCCCTAAA
ATTTTGAAAGAACAAAAGAA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVGLALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAG
SIVGSLFASGMSPDRLELEAEILGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRRIQQFPIKFAAVATDFETGKAVAFN
QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISARPSKNISQGFFSYLDQTLNVMSV
SALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIQLGEEAARAALPEIKRKLAAYRY

Sequences:

>Translated_297_residues
MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVGLALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAG
SIVGSLFASGMSPDRLELEAEILGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRRIQQFPIKFAAVATDFETGKAVAFN
QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISARPSKNISQGFFSYLDQTLNVMSV
SALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIQLGEEAARAALPEIKRKLAAYRY
>Mature_297_residues
MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVGLALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAG
SIVGSLFASGMSPDRLELEAEILGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRRIQQFPIKFAAVATDFETGKAVAFN
QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISARPSKNISQGFFSYLDQTLNVMSV
SALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIQLGEEAARAALPEIKRKLAAYRY

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=190, Percent_Identity=30, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI260656041, Length=190, Percent_Identity=30, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI116256487, Length=190, Percent_Identity=30, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI260656037, Length=190, Percent_Identity=30, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI260656043, Length=190, Percent_Identity=30, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI148727335, Length=190, Percent_Identity=30.5263157894737, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI148727290, Length=190, Percent_Identity=30.5263157894737, Blast_Score=91, Evalue=1e-18,
Organism=Escherichia coli, GI226510936, Length=194, Percent_Identity=36.0824742268041, Blast_Score=125, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71997299, Length=174, Percent_Identity=28.735632183908, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71997289, Length=174, Percent_Identity=28.735632183908, Blast_Score=73, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323581, Length=183, Percent_Identity=30.0546448087432, Blast_Score=92, Evalue=8e-20,
Organism=Drosophila melanogaster, GI281376913, Length=190, Percent_Identity=28.9473684210526, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI28571388, Length=190, Percent_Identity=26.8421052631579, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 30965; Mature: 30965

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVGLALGGGASKGFAHVGI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHH
IKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEILGKTDLVDLTLSTSGFIK
HHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEHHHHCCCCCEEEEEECCCCCEE
GEKLQNYINRKVGGRRIQQFPIKFAAVATDFETGKAVAFNQGNAGQAVRASAAIPNVFQP
HHHHHHHHHHHCCCCHHHHCCEEEEEEEECCCCCCEEEECCCCCCCEEEHHHCCCCHHHH
VIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISARPSKNISQGFFSYLDQTLNVMSV
HHCCCEEEECCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
SALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIQLGEEAARAALPEIKRKLAAYRY
HHHHHHCCCCCEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVGLALGGGASKGFAHVGI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHH
IKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEILGKTDLVDLTLSTSGFIK
HHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEHHHHCCCCCEEEEEECCCCCEE
GEKLQNYINRKVGGRRIQQFPIKFAAVATDFETGKAVAFNQGNAGQAVRASAAIPNVFQP
HHHHHHHHHHHCCCCHHHHCCEEEEEEEECCCCCCEEEECCCCCCCEEEHHHCCCCHHHH
VIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISARPSKNISQGFFSYLDQTLNVMSV
HHCCCEEEECCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
SALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIQLGEEAARAALPEIKRKLAAYRY
HHHHHHCCCCCEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]