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The map label for this gene is ykrA [H]

Identifier: 161870510

GI number: 161870510

Start: 1601816

End: 1602607

Strand: Reverse

Name: ykrA [H]

Synonym: NMCC_1573

Alternate gene names: 161870510

Gene position: 1602607-1601816 (Counterclockwise)

Preceding gene: 161870514

Following gene: 161870508

Centisome position: 74.42

GC content: 54.55

Gene sequence:

>792_bases
ATGATGAATCCCAAAATCGTGTTTTTCGATATTGACGATACGCTGTACCGCAAATATACGGATACCTTGCGTCCTTCCGT
GAAAACGGCGGTGGCGGCTTTGCGCGGCAAAGGCATATTGACGGCGTTGGCAACGGGGCGGTCTTTGGCGACGATTCCCG
AAAAGGTCAGGGACATGATGGCGGAAACGGGTATGGATGCCGTGGTAACGATAAACGGGCAGTTTGCGCTGCTGCACGGA
AAAACTGTGCGCGAAGTACCGATGGATGCCGGTTTGATGGGCAGGGTTTGCGCGCATTTGGATGGCTTGGGCATGGATTA
TGCGTTTGTCGGCGGAGAGGGGATCGCCGTGTCCGCGCTGTCGGAATGTGTGTGCCGCGCCTTGAAGCATATCGCCAGCG
ATTTTTTTGCCGATAAGGATTATTTCTCAAGCAAACCGGTGTATCAGATGCTGGTGTTTGCGGAGGAAAACGAAATGCCG
CTCTGGTCGGATATTGTGGAACAGGAAGGCTTGAAAACGGTGCGCTGGCATGAGGAAGCTGTCGATCTGCTGCCTGCGGG
CGCGTCGAAAACAGACGGCATCAGAAGCGTGGTTGAAGCATTGGGATGGGAAATGGCAGACGTGATGGCGTTCGGCGATG
GTTTGAACGATGTGGAAATGCTGTCTGAAGTCGGGTTCGGCGTGGCAATGGGCAACGGGGAACAGGCGGCGAAAGAAGCG
GCGAAATATGTTTGCCCCAGCGTTGATGAAGACGGCGTGTTGAGGGGCTTGCAAGATTTGGGCGTGATTTGA

Upstream 100 bases:

>100_bases
TTTTCGTGTTCGCGGTCAATTTTGCCGGGAAATTTATAAGGATTTATCAAGTATTTGCCTGATTGGGATACAATGCGGCA
GTTTGAGTGCGAGAGAGAAT

Downstream 100 bases:

>100_bases
ACGCATAATAACAACCCTGCCGGTTTCAGACGGCAGGGTCGGTTTTCAGCCCTTCATACAGCCTTCGTTTTGAAGCAGGG
TAAATAAGGGCGCGCCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MMNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALATGRSLATIPEKVRDMMAETGMDAVVTINGQFALLHG
KTVREVPMDAGLMGRVCAHLDGLGMDYAFVGGEGIAVSALSECVCRALKHIASDFFADKDYFSSKPVYQMLVFAEENEMP
LWSDIVEQEGLKTVRWHEEAVDLLPAGASKTDGIRSVVEALGWEMADVMAFGDGLNDVEMLSEVGFGVAMGNGEQAAKEA
AKYVCPSVDEDGVLRGLQDLGVI

Sequences:

>Translated_263_residues
MMNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALATGRSLATIPEKVRDMMAETGMDAVVTINGQFALLHG
KTVREVPMDAGLMGRVCAHLDGLGMDYAFVGGEGIAVSALSECVCRALKHIASDFFADKDYFSSKPVYQMLVFAEENEMP
LWSDIVEQEGLKTVRWHEEAVDLLPAGASKTDGIRSVVEALGWEMADVMAFGDGLNDVEMLSEVGFGVAMGNGEQAAKEA
AKYVCPSVDEDGVLRGLQDLGVI
>Mature_263_residues
MMNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALATGRSLATIPEKVRDMMAETGMDAVVTINGQFALLHG
KTVREVPMDAGLMGRVCAHLDGLGMDYAFVGGEGIAVSALSECVCRALKHIASDFFADKDYFSSKPVYQMLVFAEENEMP
LWSDIVEQEGLKTVRWHEEAVDLLPAGASKTDGIRSVVEALGWEMADVMAFGDGLNDVEMLSEVGFGVAMGNGEQAAKEA
AKYVCPSVDEDGVLRGLQDLGVI

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=261, Percent_Identity=29.5019157088123, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081790, Length=75, Percent_Identity=41.3333333333333, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28395; Mature: 28395

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALATGRSLATIPEKVRDMM
CCCCEEEEEECCHHHHHHHHHHHCHHHHHHHHHHHCCCCEEHHHCCCCHHHHHHHHHHHH
AETGMDAVVTINGQFALLHGKTVREVPMDAGLMGRVCAHLDGLGMDYAFVGGEGIAVSAL
HHCCCCEEEEECCCEEEEECCCHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHH
SECVCRALKHIASDFFADKDYFSSKPVYQMLVFAEENEMPLWSDIVEQEGLKTVRWHEEA
HHHHHHHHHHHHHHHHCCCHHCCCCCHHHEEEEECCCCCCHHHHHHHHCCCHHHHHHHHH
VDLLPAGASKTDGIRSVVEALGWEMADVMAFGDGLNDVEMLSEVGFGVAMGNGEQAAKEA
HHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCHHHHHHH
AKYVCPSVDEDGVLRGLQDLGVI
HHHCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MMNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALATGRSLATIPEKVRDMM
CCCCEEEEEECCHHHHHHHHHHHCHHHHHHHHHHHCCCCEEHHHCCCCHHHHHHHHHHHH
AETGMDAVVTINGQFALLHGKTVREVPMDAGLMGRVCAHLDGLGMDYAFVGGEGIAVSAL
HHCCCCEEEEECCCEEEEECCCHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHH
SECVCRALKHIASDFFADKDYFSSKPVYQMLVFAEENEMPLWSDIVEQEGLKTVRWHEEA
HHHHHHHHHHHHHHHHCCCHHCCCCCHHHEEEEECCCCCCHHHHHHHHCCCHHHHHHHHH
VDLLPAGASKTDGIRSVVEALGWEMADVMAFGDGLNDVEMLSEVGFGVAMGNGEQAAKEA
HHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCHHHHHHH
AKYVCPSVDEDGVLRGLQDLGVI
HHHCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]