Click here to switch to the map view.

The map label for this gene is 161870514

Identifier: 161870514

GI number: 161870514

Start: 1605499

End: 1605885

Strand: Reverse

Name: 161870514

Synonym: NMCC_1577

Alternate gene names: NA

Gene position: 1605885-1605499 (Counterclockwise)

Preceding gene: 161870515

Following gene: 161870510

Centisome position: 74.57

GC content: 42.89

Gene sequence:

>387_bases
GTGAGAAAGATTCTGCTTGATACCCATGCGTTGCTGTGGTGGTTGTTGGATGACAAGAAACTGGGGATATCTGCACGCAA
ACTGATAGAAAATCCGAGAAATGCGATCTTTGTCAGTGCAGCAAGTATTTGGGAAATTTCCATCAAGCAGAACAAGGGGT
TGTTGAAATTACCGGAAGAGTTTTTTGATGTGCTTCAAGAAGAGGATTTTGAAATGTTGCCTATAGGTCTGTTTCATGCA
AAACAGGCTGGAAGCCTTCCGGAGATACACAAAGACCCTTTCGATAGGATGTTGATTGCACAAACCCAAGCGGAAGGCTT
TGAACTGATGACTGTCGATGAATATATTCCGCAGTATGGAATTAGAGTTGTCAACGCATCAAGCTGA

Upstream 100 bases:

>100_bases
GAAGGTTGAAAAAATTCAGTCATATGGAAAATACGGATATTTCACGTATTCTTGAGGATGACAATGAAACGGCAGCTTTA
TTTTTTGAGGAGTCGGCTCT

Downstream 100 bases:

>100_bases
CAAATACAAAAACTGTGTACACAAGAAAGACCGCCGAGGCGGTCTTTTCGGTTATTGTCTTCGCTTAAAAGCCAGACTTC
CGTCGCGGCCTATAAACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Protein Domain Protein; PilT Protein Domain-Containing Protein; PilT Protein-Like; PilT Protein-Like Protein; PilT Protein Domain Containing Protein; Pilus Retraction Motor Protein PilT; Xin Of A Toxin/Antitoxin System; PilT Protein N-Terminal

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MRKILLDTHALLWWLLDDKKLGISARKLIENPRNAIFVSAASIWEISIKQNKGLLKLPEEFFDVLQEEDFEMLPIGLFHA
KQAGSLPEIHKDPFDRMLIAQTQAEGFELMTVDEYIPQYGIRVVNASS

Sequences:

>Translated_128_residues
MRKILLDTHALLWWLLDDKKLGISARKLIENPRNAIFVSAASIWEISIKQNKGLLKLPEEFFDVLQEEDFEMLPIGLFHA
KQAGSLPEIHKDPFDRMLIAQTQAEGFELMTVDEYIPQYGIRVVNASS
>Mature_128_residues
MRKILLDTHALLWWLLDDKKLGISARKLIENPRNAIFVSAASIWEISIKQNKGLLKLPEEFFDVLQEEDFEMLPIGLFHA
KQAGSLPEIHKDPFDRMLIAQTQAEGFELMTVDEYIPQYGIRVVNASS

Specific function: Unknown

COG id: COG3744

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14696; Mature: 14696

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKILLDTHALLWWLLDDKKLGISARKLIENPRNAIFVSAASIWEISIKQNKGLLKLPEE
CCEEEEHHHEEEEEEECCCCCCHHHHHHHCCCCCEEEEEECEEEEEEECCCCCCEECCHH
FFDVLQEEDFEMLPIGLFHAKQAGSLPEIHKDPFDRMLIAQTQAEGFELMTVDEYIPQYG
HHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHEEEECCCCCEEEEEHHHHHHCCC
IRVVNASS
EEEEECCC
>Mature Secondary Structure
MRKILLDTHALLWWLLDDKKLGISARKLIENPRNAIFVSAASIWEISIKQNKGLLKLPEE
CCEEEEHHHEEEEEEECCCCCCHHHHHHHCCCCCEEEEEECEEEEEEECCCCCCEECCHH
FFDVLQEEDFEMLPIGLFHAKQAGSLPEIHKDPFDRMLIAQTQAEGFELMTVDEYIPQYG
HHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHEEEECCCCCEEEEEHHHHHHCCC
IRVVNASS
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA