Click here to switch to the map view.

The map label for this gene is yfcB [C]

Identifier: 161870501

GI number: 161870501

Start: 1588028

End: 1588903

Strand: Reverse

Name: yfcB [C]

Synonym: NMCC_1558

Alternate gene names: 161870501

Gene position: 1588903-1588028 (Counterclockwise)

Preceding gene: 161870506

Following gene: 161870499

Centisome position: 73.79

GC content: 46.92

Gene sequence:

>876_bases
TTGACGACTATCCGCGATGTTTTACGTTTTGCAGTCAGCCGTTTTAATGAGGCAGGGCTCTTTTTTGGTCATGGAACAGA
TAATGCGCATGATGAAGCGGCTTATTTGATTCTGCATACTTTGAATTTGCCTTTGGATATGCTTGCCCCATATCTTGATG
CAAAACTCTTGGAAGCTGAAAAAGAGGAAGTGCTGGCGGTTATTGAGCGTCGTGCTGTCGAACACATTCCAGCCGCTTAT
TTGACACACCAAGCATGGCAGGGAGAGTTTGATTTCTATGTGGATGAGCGCGTAATCATACCTCGTTCTTTTATTTATGA
ATTGTTGGGTAACGGACTTCGTCCTTGGATAGAATACGATGAGCTGGTGCATAATGCTTTGGATCTTTGCACCGGAAGCG
GTTGCCTTGCCATTCAGATGGCGCATCACTATCCCGATGCGCACATTGATGCGGTTGATGTGAGCTTGGATGCTTTGGAA
GTGGCAGGGATTAATGTCGAAGATTATGGTTTGGAAGAACGCATCCGGCTTATTCATACGGATTTGTTTGAAGGATTGGA
AGGCACTTATGATTTGATTGTTTCCAATCCGCCTTATGTGGATGCGGAATCGGTTGAGTTATTGCCTGAAGAGTATTTGC
ACGAACCGAAATTGGCATTGGGCAGCGGGGCGGACGGGTTGGATGCCACCAGGCAGATTCTTCTGAATGCGGCAAAGTTT
CTGAATCCCAAAGGTGTATTGCTGGTGGAAATCGGGCATAACAGGGATGTATTGGAAGCAGCGTATCCGGAGTTGCCTTT
TACTTGGTTGGAAACCAGCGGGGGCGACGGTTTTGTTTTCCTCTTGACGCGCGAGCAGTTATTGGGTGAAGAGTGA

Upstream 100 bases:

>100_bases
TATTTGGCGATATGAAAAGGTTTGCTTGTTGTTTCTGTTATAATTAAAAGTATCTATACGCAGAATGGTTCATATTATGT
TTAATCAGGCAGCACAAGAA

Downstream 100 bases:

>100_bases
GTTGAAGGGGAAATGCCGTCTGAAGACGATTTGTTTTCAGACGGCATTTTTACGATACGTTGTCTCGGGTTTGATGCTTG
GCAGAGAAATCCTTACCATA

Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAAYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAY
LTHQAWQGEFDFYVDERVIIPRSFIYELLGNGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAHIDAVDVSLDALE
VAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYLHEPKLALGSGADGLDATRQILLNAAKF
LNPKGVLLVEIGHNRDVLEAAYPELPFTWLETSGGDGFVFLLTREQLLGEE

Sequences:

>Translated_291_residues
MTTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAAYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAY
LTHQAWQGEFDFYVDERVIIPRSFIYELLGNGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAHIDAVDVSLDALE
VAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYLHEPKLALGSGADGLDATRQILLNAAKF
LNPKGVLLVEIGHNRDVLEAAYPELPFTWLETSGGDGFVFLLTREQLLGEE
>Mature_290_residues
TTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAAYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYL
THQAWQGEFDFYVDERVIIPRSFIYELLGNGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAHIDAVDVSLDALEV
AGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYLHEPKLALGSGADGLDATRQILLNAAKFL
NPKGVLLVEIGHNRDVLEAAYPELPFTWLETSGGDGFVFLLTREQLLGEE

Specific function: Unknown

COG id: COG2890

COG function: function code J; Methylase of polypeptide chain release factors

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705409, Length=273, Percent_Identity=27.1062271062271, Blast_Score=85, Evalue=6e-17,
Organism=Escherichia coli, GI87082085, Length=291, Percent_Identity=51.2027491408935, Blast_Score=278, Evalue=2e-76,
Organism=Escherichia coli, GI1787463, Length=246, Percent_Identity=26.8292682926829, Blast_Score=74, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24582226, Length=137, Percent_Identity=33.5766423357664, Blast_Score=68, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR004556
- InterPro:   IPR017127
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 32566; Mature: 32435

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAAYLILHTLNLPLDMLAPYLDAKLLEAE
CCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHH
KEEVLAVIERRAVEHIPAAYLTHQAWQGEFDFYVDERVIIPRSFIYELLGNGLRPWIEYD
HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEECCEEECCHHHHHHHHCCCCCCHHHHH
ELVHNALDLCTGSGCLAIQMAHHYPDAHIDAVDVSLDALEVAGINVEDYGLEERIRLIHT
HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECEECHHEEECCCHHHCCHHHHHHHHHH
DLFEGLEGTYDLIVSNPPYVDAESVELLPEEYLHEPKLALGSGADGLDATRQILLNAAKF
HHHHCCCCCEEEEECCCCCCCCHHHHHCCHHHCCCCCEECCCCCCCHHHHHHHHHHHHHH
LNPKGVLLVEIGHNRDVLEAAYPELPFTWLETSGGDGFVFLLTREQLLGEE
CCCCCEEEEEECCCCCHHHHHCCCCCEEEEEECCCCEEEEEEEEHHHCCCC
>Mature Secondary Structure 
TTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAAYLILHTLNLPLDMLAPYLDAKLLEAE
CHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHH
KEEVLAVIERRAVEHIPAAYLTHQAWQGEFDFYVDERVIIPRSFIYELLGNGLRPWIEYD
HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEECCEEECCHHHHHHHHCCCCCCHHHHH
ELVHNALDLCTGSGCLAIQMAHHYPDAHIDAVDVSLDALEVAGINVEDYGLEERIRLIHT
HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECEECHHEEECCCHHHCCHHHHHHHHHH
DLFEGLEGTYDLIVSNPPYVDAESVELLPEEYLHEPKLALGSGADGLDATRQILLNAAKF
HHHHCCCCCEEEEECCCCCCCCHHHHHCCHHHCCCCCEECCCCCCCHHHHHHHHHHHHHH
LNPKGVLLVEIGHNRDVLEAAYPELPFTWLETSGGDGFVFLLTREQLLGEE
CCCCCEEEEEECCCCCHHHHHCCCCCEEEEEECCCCEEEEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]