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The map label for this gene is dsbB [H]

Identifier: 161870493

GI number: 161870493

Start: 1581069

End: 1581758

Strand: Reverse

Name: dsbB [H]

Synonym: NMCC_1549

Alternate gene names: 161870493

Gene position: 1581758-1581069 (Counterclockwise)

Preceding gene: 161870494

Following gene: 161870491

Centisome position: 73.45

GC content: 52.61

Gene sequence:

>690_bases
TTGCCGAAATTCAAATCCTCCGGATGTATTTTTTTGCGGGCATTGTGCGGGCAAATCGCCGTTTTGTCCCTTGTCAGGTC
TTGTGTATATCGGGAAAACCGAAATCGTCCGCACCTGAGCCGGTGTCGATTCGTCCCTTGCCATCTCGGGATATATCCAG
CAAAATCGGCATATCGGTATTTTGATTGGTGTGTTGAGAAAATGACCCCGTTATTTAGAAAAGCCGTTTGGCTGCTGTTT
GCCGTTTCGGTCTGTGCATTTGCCGGTTCTTTGGCGGCACAGTATGTTTTGGGTATGGAGCCTTGCGTTTTGTGTATCAG
TCAGCGGTTATGCGTTTTGGCAACCGCATTGTGTACGGCAATTGTCCTGATGTGCAGACCAAGAAGAAGGGCGGGCGGTT
TGTTCGGTGCTGTCTTTATCAGCATCCCGGCCGTTACGGGTATTTCTGTTGCGGCATATCAGTTGTGGTTGCAGTCGCTG
CCGCCGGGTACGGCTCCTTCGTGCGGTGCGCCGTGGACGTTTCGATTGAAGGGCTGGCCTTTGTTTGATTGGTTCGAGCC
TGTCGTGCGCGGGTTCGGAAATTGTGCCGAACCGGATTATCTGCTGGGGGTTGCTTTGCCTGTTTGGAGCGCGGCGTATT
TTCTGGCGGTTGTCCTGACGGTTTGGTGGGCGTGGGCAAGGGCTAAATAA

Upstream 100 bases:

>100_bases
CCGATGGCTATCCGGTAACAAATTCCTTCAAAAACCTGTCAATCCGCTTATTCAAAAAAATCATATGATTTCATTGAAAT
AAACTTTTGATTCGCTAAAT

Downstream 100 bases:

>100_bases
ATCAATGCCGTCTGAAAGGTTCAGACGGCATTTTATTGTATGTCTGCTGTGCTGCGTATCAGTCCAAATTCAATACGGCG
GAAGTGTAAACGTCTTGCAC

Product: disulfide bond formation protein DsbB

Products: NA

Alternate protein names: Disulfide oxidoreductase [H]

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MPKFKSSGCIFLRALCGQIAVLSLVRSCVYRENRNRPHLSRCRFVPCHLGIYPAKSAYRYFDWCVEKMTPLFRKAVWLLF
AVSVCAFAGSLAAQYVLGMEPCVLCISQRLCVLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSL
PPGTAPSCGAPWTFRLKGWPLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWARAK

Sequences:

>Translated_229_residues
MPKFKSSGCIFLRALCGQIAVLSLVRSCVYRENRNRPHLSRCRFVPCHLGIYPAKSAYRYFDWCVEKMTPLFRKAVWLLF
AVSVCAFAGSLAAQYVLGMEPCVLCISQRLCVLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSL
PPGTAPSCGAPWTFRLKGWPLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWARAK
>Mature_228_residues
PKFKSSGCIFLRALCGQIAVLSLVRSCVYRENRNRPHLSRCRFVPCHLGIYPAKSAYRYFDWCVEKMTPLFRKAVWLLFA
VSVCAFAGSLAAQYVLGMEPCVLCISQRLCVLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLP
PGTAPSCGAPWTFRLKGWPLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWARAK

Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein [H]

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003752
- InterPro:   IPR022920 [H]

Pfam domain/function: PF02600 DsbB [H]

EC number: NA

Molecular weight: Translated: 25484; Mature: 25352

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKFKSSGCIFLRALCGQIAVLSLVRSCVYRENRNRPHLSRCRFVPCHLGIYPAKSAYRY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHCCCCCCHHHHHH
FDWCVEKMTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLCVLATALCTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCGAPWTFRLKGWP
HHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
LFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWARAK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKFKSSGCIFLRALCGQIAVLSLVRSCVYRENRNRPHLSRCRFVPCHLGIYPAKSAYRY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHCCCCCCHHHHHH
FDWCVEKMTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLCVLATALCTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCGAPWTFRLKGWP
HHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
LFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWARAK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA