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The map label for this gene is yaaJ [C]

Identifier: 161870491

GI number: 161870491

Start: 1578537

End: 1579955

Strand: Reverse

Name: yaaJ [C]

Synonym: NMCC_1547

Alternate gene names: 161870491

Gene position: 1579955-1578537 (Counterclockwise)

Preceding gene: 161870493

Following gene: 161870489

Centisome position: 73.37

GC content: 52.22

Gene sequence:

>1419_bases
ATGGAAAATATATTGTCTGTTCTGGTGGGTACAGTCAATCGGTTCCTTTGGGACTACCTGCTGATTTACGCGCTTTTGGG
TATCGGCCTGTTTTTTACGCTGTATCTCGGTGCGCCGCAGATTACCAAGCTGGGTGCGGGATTCAAATCTGTATTCGGCG
GCTTGTTTGCCAAAGGCGATAAAGACGACAAGTCTTTATCGCAGTTTCAGGCGTTGGCGGTTGCCATATCTGCGCAAATC
GGTACGGGCAACGTCGCCGGCGTGGCGACCGCCATCACCGCAGGCGGGCCGGGCGCGATTTTTTGGATGTGGGTTTCTGC
CGTTTTGGGGATGTCCACGATTTTTGCGGAGGCACTGCTGGCGCAGAAATACCGCGTCGTCAGCCACGGCAAATACATCG
GTGGGCCGGCGTTTTATATTACGCACGGTCTGACTCCGAAAATCGGCAGGGGCGCGGCGCGTTTCCTGTCGGGCTTTTTC
TCCATTGCGTTGATTATCGCATTGGGCTTTATCGGCAATGCGACACAGGCAAACTCCATTGCTTCTGCCGTTACCATTGC
ATTTGATGTGCCTTCTTTGGCAGTCGGTATTGTGCTTGCCGTCCTTGCGGGCATGGTTGTGATTGGCGGCGTGAACCGTA
TTGCCAATATTGCCCAGTTTGTCGTGCCGTTTATGGCGGTTGTTTATATTTTGTGCGCCGTCGTTATCCTGTTTGAATTT
TCCGACTATATTGTGCCGATGTTCAACCACATCTTTACCGCCGCCTTCAATCCTGAAGCCGTTTTGGGCGGTGCGGCGGG
TATCGGTATGCGCGAAGCGATACGTTTCGGCGTGGCGCGCGGTCTGTTTTCCAATGAGGCGGGGATGGGTTCGACTCCGC
ACGCCCACGCGACTGCGGATGTGAAGCATCCTGTACAGCAAGGTATGGCGGCATTTGTCGGTGTGTTTATCGATACGATT
TTGGTATGTACGGCAACTGCGCTGATTATCCTGCTGACCGATGCCAACCTTTCGGGCGAACAGGGCGCGGCGGTTACTCA
ATTTGCCTTTAACAAGGCATTTCCGGGCTTCGGTTCGCAATTGCTTGCCGTGTGTCTGACCTTCTTCGCCTTGACGACCA
TTATCGGCTGGTATTATTTCGGTGAGTCCAACATCCGTTTTCTTTTCAGGGGAAGACACTTGGGCATCTATCGCGCATTG
GTTCTGCTTGCCATCGTTTTAGGTACGCTCGGCAAAGTCGATTTGGTTTGGAGCCTGTCCGATATGTTCAACGGCTTTAT
GGTTATCCCGAACTTGATAGCCCTGTTTTTGTTGCGTAAGGAAATCCGTGCCATTTATGATGATTATTTGGCACAGAAAA
AAGCGGGTCGGGATTTGTCTTATCCGTATGAATTCCACGAGTTCCACGACAAGGGCTGA

Upstream 100 bases:

>100_bases
TAAGGCATCTGTTGCGGCAAATACGGTCTGCTCGCCGTGTTTCCTTATTGGAATGTCTTTTGGAAGGCAGTCATTTTAAT
TGTAAGATAAGGTTTATTTT

Downstream 100 bases:

>100_bases
TGTCCGGCAAACAGAAAACCTCCCAATCTTCAGGATCGGGAGGTTTTGTTTTTCAGACGGCATTCAGATTACATAACCGT
ACACACTGACAAATTGGGTG

Product: alanine or glycine:cation AGCS family symporter

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKLGAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQI
GTGNVAGVATAITAGGPGAIFWMWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIAQFVVPFMAVVYILCAVVILFEF
SDYIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRFGVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTI
LVCTATALIILLTDANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFALTTIIGWYYFGESNIRFLFRGRHLGIYRAL
VLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYLAQKKAGRDLSYPYEFHEFHDKG

Sequences:

>Translated_472_residues
MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKLGAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQI
GTGNVAGVATAITAGGPGAIFWMWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIAQFVVPFMAVVYILCAVVILFEF
SDYIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRFGVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTI
LVCTATALIILLTDANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFALTTIIGWYYFGESNIRFLFRGRHLGIYRAL
VLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYLAQKKAGRDLSYPYEFHEFHDKG
>Mature_472_residues
MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKLGAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQI
GTGNVAGVATAITAGGPGAIFWMWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIAQFVVPFMAVVYILCAVVILFEF
SDYIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRFGVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTI
LVCTATALIILLTDANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFALTTIIGWYYFGESNIRFLFRGRHLGIYRAL
VLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYLAQKKAGRDLSYPYEFHEFHDKG

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=467, Percent_Identity=36.1884368308351, Blast_Score=265, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 50427; Mature: 50427

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKLGAGFKSVFGGLFAKGD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCC
KDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFWMWVSAVLGMSTIFAEALL
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFFSIALIIALGFIGNATQANSI
HHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIAQFVVPFMAVVYILCAVVILFEF
HHHHHHEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDYIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRFGVARGLFSNEAGMGSTPHAHATAD
HHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
VKHPVQQGMAAFVGVFIDTILVCTATALIILLTDANLSGEQGAAVTQFAFNKAFPGFGSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCCCCCHH
LLAVCLTFFALTTIIGWYYFGESNIRFLFRGRHLGIYRALVLLAIVLGTLGKVDLVWSLS
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHEEEHH
DMFNGFMVIPNLIALFLLRKEIRAIYDDYLAQKKAGRDLSYPYEFHEFHDKG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKLGAGFKSVFGGLFAKGD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCC
KDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFWMWVSAVLGMSTIFAEALL
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFFSIALIIALGFIGNATQANSI
HHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIAQFVVPFMAVVYILCAVVILFEF
HHHHHHEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDYIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRFGVARGLFSNEAGMGSTPHAHATAD
HHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
VKHPVQQGMAAFVGVFIDTILVCTATALIILLTDANLSGEQGAAVTQFAFNKAFPGFGSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCCCCCHH
LLAVCLTFFALTTIIGWYYFGESNIRFLFRGRHLGIYRALVLLAIVLGTLGKVDLVWSLS
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHEEEHH
DMFNGFMVIPNLIALFLLRKEIRAIYDDYLAQKKAGRDLSYPYEFHEFHDKG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]