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The map label for this gene is yebC [C]

Identifier: 161870492

GI number: 161870492

Start: 1580438

End: 1581010

Strand: Direct

Name: yebC [C]

Synonym: NMCC_1548

Alternate gene names: 161870492

Gene position: 1580438-1581010 (Clockwise)

Preceding gene: 161870490

Following gene: 161870495

Centisome position: 73.39

GC content: 55.5

Gene sequence:

>573_bases
TTGGAAAAAGCAGCCGAAAACAATATGCCCAAAGACAATGTGCAACGCGCCATCGACAAAGGCACGGGCAACTTGGAAGG
CGTGGAATACATCGAATTGCGCTACGAAGGCTACGGCATCGGCGGCGCGGCTTTGATGGTGGACTGCCTGACCGACAACA
AAACCCGCACCGTTGCGGACGTACGCCACGCGTTTACCAAAAACGGCGGCAACTTGGGTACCGACGGCTGCGTGGCGTTC
AACTTCGTGCATCAGGGCTATTTGGTATTCGAACCCGGCGTTGACGAAGACGCGCTGATGGAAGCGGCTTTGGAAGCCGG
TGCGGAAGACGTGGTTACCAACGACGACGGTTCCATCGAAGTCATTACCGCGCCAAACGATTGGGCGGGCGTAAAATCCG
CTTTGGAGGCGGCAGGTTACAAATCCGTTGACGGCGACGTTACGATGCGCGCCCAAAACGAAACCGAACTCTCCGGCGAC
GATGCCGTCAAAATGCAAAAACTGATTGACGCGCTGGAAGACTTGGACGACGTGCAAGACGTTTACACTTCCGCCGTATT
GAATTTGGACTGA

Upstream 100 bases:

>100_bases
CAAACGCGGCAAAATCTTCACCCGTTTAATCAAAGAAATCACCGTTGCGGCGCGTATGGGCGGCGGCGATCCCGGCGCAA
ATCCGCGCCTGCGCCTGGCT

Downstream 100 bases:

>100_bases
TACGCAGCACAGCAGACATACAATAAAATGCCGTCTGAACCTTTCAGACGGCATTGATTTATTTAGCCCTTGCCCACGCC
CACCAAACCGTCAGGACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFTKNGGNLGTDGCVAF
NFVHQGYLVFEPGVDEDALMEAALEAGAEDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGD
DAVKMQKLIDALEDLDDVQDVYTSAVLNLD

Sequences:

>Translated_190_residues
MEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFTKNGGNLGTDGCVAF
NFVHQGYLVFEPGVDEDALMEAALEAGAEDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGD
DAVKMQKLIDALEDLDDVQDVYTSAVLNLD
>Mature_190_residues
MEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFTKNGGNLGTDGCVAF
NFVHQGYLVFEPGVDEDALMEAALEAGAEDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGD
DAVKMQKLIDALEDLDDVQDVYTSAVLNLD

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=192, Percent_Identity=28.125, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI1788171, Length=182, Percent_Identity=53.2967032967033, Blast_Score=187, Evalue=4e-49,
Organism=Escherichia coli, GI1788294, Length=185, Percent_Identity=41.0810810810811, Blast_Score=122, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6321458, Length=211, Percent_Identity=33.175355450237, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 20329; Mature: 20329

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVAD
CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHEEEECCCCCHHHHHH
VRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGAEDVVTNDDGSIE
HHHHHHCCCCCCCCCCCEEEEEHHCCEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCEE
VITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQKLIDALEDLDDVQD
EEECCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VYTSAVLNLD
HHHHHHHCCC
>Mature Secondary Structure
MEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVAD
CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHEEEECCCCCHHHHHH
VRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGAEDVVTNDDGSIE
HHHHHHCCCCCCCCCCCEEEEEHHCCEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCEE
VITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQKLIDALEDLDDVQD
EEECCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VYTSAVLNLD
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA